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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/gmap">Debian Med / gmap</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/e49169293f29d2ece8cb4dcab57fc2b025ef5e9a">e4916929</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T07:44:37+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update references
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/c46d97c63fde63497941c693fcdffe70764cc08d">c46d97c6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T07:48:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream has released gmap under free license
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/eb85455bc7fcd13a374dcc79e78d7417e934f638">eb85455b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T07:49:13+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/ea8a10e9d030d5d884d829d5b717d87245962b8c">ea8a10e9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T07:49:13+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2020-04-08+ds</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/91b73763c31f7a8d744ddf6b90cf8c553599ccdc">91b73763</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T07:49:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2020-04-08+ds'
Update to upstream version '2020-04-08+ds'
with Debian dir 07f5bb539687e507abda768fbd7f31057cb7dcb5</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/2fb0c97af8e65d88e813393c37866822570ff0ca">2fb0c97a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T08:03:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Ignore false positive for spelling
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/99da77307160269b3480257852cd57eca38ab0a4">99da7730</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T08:04:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Polish d/copyright
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/80d7f27f1efeabf368328d16cac549244b91570d">80d7f27f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T08:06:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/watch: dversionmangle
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/90e1515725d7212ae455599fc5234219ff3ec30d">90e15157</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T08:07:35+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add license paragraph
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/a464b4addda249e8c63a7cd4c5136e975620aebe">a464b4ad</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T08:11:53+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/48bdc87df1b044cf1935d4eb1b411af8aa7d8ba6">48bdc87d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:04:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not override missing manpages
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/444bc6c56e2b665e9ee5fcaec23f25cb96c1985d">444bc6c5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:08:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix license
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/2418f581e07e10941f198a611580efe0a2c625ae">2418f581</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:09:24+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not ship AUTHORS as doc
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/6b014424d781a151d4b431e074a596e65eed5552">6b014424</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:18:15+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop getopt from upstream source
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/580578c81a6f0a4856a08239759752a63be98e0e">580578c8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:20:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2020-04-08+ds1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/e8bb249198a8c9501a41701599d1b39caf10f93e">e8bb2491</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:20:51+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2020-04-08+ds1'
Update to upstream version '2020-04-08+ds1'
with Debian dir 3fbdc9f7cbe75d183da46fd9366e65f8848b92d0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/57ce4d9795da13ce6ca6532822ffe2e2e9ab76ab">57ce4d97</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:28:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Really get rid of getopt
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gmap/-/commit/d6e079459b30423b89967000e84075568ce05343">d6e07945</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T18:48:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#b33892fbddeffc3368077b4904ad0b3d562a7312">
VERSION
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#3a5a7cdb36d3ebf45777d0bc382dd46aa7a18f32">
debian/docs
</a>
</li>
<li class="file-stats">
<a href="#9b1c96f41649b1cf2caca14d85df2a48f1e06d13">
debian/gmap.lintian-overrides
</a>
</li>
<li class="file-stats">
<a href="#9fd77014d4c25b9aab7109c2e97ddfe7a415d292">
<span class="new-file">
+
debian/patches/remove_getopt_code_copy.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#99573549d1224eba401f8316ba0047ec0803cd72">
src/access.c
</a>
</li>
<li class="file-stats">
<a href="#95251d51907fc8574de4cf594ab85179425a3ae8">
src/access.h
</a>
</li>
<li class="file-stats">
<a href="#7bbfbe883d54d4c3df0b0c3e14ed8e375900d3f4">
src/compress-write.c
</a>
</li>
<li class="file-stats">
<a href="#99b4959934377caa88b810f25950880884cff9db">
src/compress-write.h
</a>
</li>
<li class="file-stats">
<a href="#dd95913eb0422003ba638966394b3aa6e68d322b">
src/dynprog_end.c
</a>
</li>
<li class="file-stats">
<a href="#21fa3a3235386f70fbec47c2f55d39928abcbcca">
src/get-genome.c
</a>
</li>
<li class="file-stats">
<a href="#007a7031bcc0730b473e1e7bc194107d63890464">
<span class="deleted-file">
−
src/getopt.c
</span>
</a>
</li>
<li class="file-stats">
<a href="#6baa59ff3ad7688c54727115769d609c3a793e3c">
<span class="deleted-file">
−
src/getopt.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#f0bf7c65bad6efa08d5c3fcda464f44a0959dd29">
<span class="deleted-file">
−
src/getopt1.c
</span>
</a>
</li>
<li class="file-stats">
<a href="#d747f527041a6e797f86fcd6f1fcd1562bab24a2">
src/gmap.c
</a>
</li>
<li class="file-stats">
<a href="#69a23b4097fdef6b1a1795d97c170e18a619a213">
src/gmapindex.c
</a>
</li>
<li class="file-stats">
<a href="#d1a71d80a50c38c9cb493f24be3edf3b17c8f562">
src/gsnap.c
</a>
</li>
<li class="file-stats">
<a href="#894c3433838711465f53715b142e643e72eefba2">
src/iit-read-univ.c
</a>
</li>
<li class="file-stats">
<a href="#5170d90685a7135d70bd46ddcd0bd6882099351b">
src/iit-read.c
</a>
</li>
<li class="file-stats">
<a href="#c80915b8508730a210b3a23d709a761bb84d0459">
src/iit_get.c
</a>
</li>
<li class="file-stats">
<a href="#aedf22ff015607574571530a4acdc6a53907417b">
src/iit_store.c
</a>
</li>
<li class="file-stats">
<a href="#a05aa71916f5812fd11c06bfdebeed7f5ef3537d">
src/indexdb-cat.c
</a>
</li>
<li class="file-stats">
<a href="#c672fce9c671440792e33117e131e53e07e9ddc6">
src/output.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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