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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/t-coffee">Debian Med / t-coffee</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/56fdece94fe59db55f5c66a74cec836ccda8aab9">56fdece9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:08:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/4e38a4a5cae65b1b5cb08a5411ab4881ce9b8a7f">4e38a4a5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:08:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/78500fa6a10bbb816635dde593d27c4463f85d9d">78500fa6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:08:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 13.41.0.28bdc39</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/d7ee8edc2ac430e49ef11b179e66406e4ef246e8">d7ee8edc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:09:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/13.41.0.28bdc39'
Update to upstream version '13.41.0.28bdc39'
with Debian dir ad2aa628aa1a8731b5f2b72e919967117cf197fe</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/b8c25e2f4a30d3f80494d33cff8ab93f5c6217e3">b8c25e2f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:25:08+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/8a53d8396bca4e6d22f6b80efc20f8f59174496a">8a53d839</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:19+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/f0d8cdf584a48e1757ce892bfd8e0c4c289be9ee">f0d8cdf5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:19+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/f3651d4613412b882940c38dd03a9ee0b5993719">f3651d46</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:20+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.
Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/8b18f97a291807ba182ff849aaad83a016d23a2a">8b18f97a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove duplicate line from changelog.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/c6ee3fe01cef08d4fbc59b772a115c0aa361efc5">c6ee3fe0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:25+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove unnecessary Team Upload line in changelog.
Fixes: lintian: unnecessary-team-upload
See-also: https://lintian.debian.org/tags/unnecessary-team-upload.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/4f58d945504f829743ebcb826e2aee4f2367420d">4f58d945</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:25+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set fields Upstream-Name, Upstream-Contact in debian/copyright.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/-/commit/c2aee3eedc05bcc2dc3ac06cea52fa3e34305cca">c2aee3ee</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-15T22:26:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright).</pre>
</li>
</ul>
<h4>26 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
<span class="new-file">
+
README
</span>
</a>
</li>
<li class="file-stats">
<a href="#8382aae488daa740db1c3de5cf5400b1379fc6b6">
bin/linux/t_coffee
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#b21abc9e9819918419bfe0b0777b0b499f07e375">
debian/patches/clustalw2.patch
</a>
</li>
<li class="file-stats">
<a href="#8b7aede91f63a56963c57c21edec1407bbb19ab9">
debian/patches/fix_tempfile_name_sharing.patch
</a>
</li>
<li class="file-stats">
<a href="#7689488b0611809fd3cf1973798c485006db95fe">
debian/patches/mayhem.patch
</a>
</li>
<li class="file-stats">
<a href="#fb2826f928fcb9e1779ebe9572d63592eaff6fde">
debian/patches/ncbi-blast++_has_dropped_pl_extension.patch
</a>
</li>
<li class="file-stats">
<a href="#136495274f26b959acad83e1663732c8e8586e5d">
debian/patches/set_proper_dir_permissions.patch
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</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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</li>
<li class="file-stats">
<a href="#239f71e979fda2fac5baf25d6299bd224dc796b3">
<span class="new-file">
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doc/html/_sources/doc2test.rst.txt
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<a href="#9cd1aa955c3f5dc4804be64df6fbf2282bdc1b07">
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doc/html/_sources/index.rst.txt
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<a href="#d40d0298b2cdfb175d8a5c76ff063edb0bc4589c">
<span class="new-file">
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doc/html/_sources/page-example.rst.txt
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<li class="file-stats">
<a href="#6299cb31418c0a8b263a559a1b554395f0e1883e">
<span class="new-file">
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doc/html/_sources/tcoffee_citations_references.rst.txt
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<li class="file-stats">
<a href="#8d648cf27c95ab19efe65c435f02ec5b0c809fdd">
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doc/html/_sources/tcoffee_contacts_adresses.rst.txt
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<a href="#41294d9f728c848b450f059549c4365c8707ad2b">
<span class="new-file">
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doc/html/_sources/tcoffee_doctest.rst.txt
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<li class="file-stats">
<a href="#50172dc156cfca0f84e86c18de5e3743601785b8">
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doc/html/_sources/tcoffee_documentation_validation.rst.txt
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<a href="#93b043ec7c7b4281789a292c3492d95cd1c16f80">
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doc/html/_sources/tcoffee_faq.rst.txt
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doc/html/_sources/tcoffee_installation.rst.txt
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<a href="#81738b83b4d620bcc572fb2c813e04b0f5705a48">
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doc/html/_sources/tcoffee_license.rst.txt
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<a href="#633695243c27f7df28bd9ec02644c0a0fd6eaa0c">
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doc/html/_sources/tcoffee_main_documentation.rst.txt
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<a href="#429b615ffd6fd0bde71a1eeb9d527f79b51a04ea">
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+
doc/html/_sources/tcoffee_quickstart.rst.txt
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<a href="#ab2313fb6c885f99f932a4dbc2b6dbdaa3d9ebcc">
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doc/html/_sources/tcoffee_quickstart_regressive.rst.txt
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<a href="#c295dcec9cdbc31c0776466b56e55e54b8277a17">
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doc/html/_sources/tcoffee_release_notes.rst.txt
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<h5>The diff was not included because it is too large.</h5>
</div>
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