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<h3>
Sascha Steinbiss pushed to branch master
at <a href="https://salsa.debian.org/med-team/fastaq">Debian Med / fastaq</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/f41dbedfb51a1f8fa1415f8246e4e93179af9022">f41dbedf</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:13:15+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">mention contributors' work in d/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/88c84b2b046bd5547052e0f79bb1745025c01247">88c84b2b</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:13:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">bump Standards-Version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/507f9ca97c17e014676fa87ed231597dcf758f9f">507f9ca9</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:13:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use debhelper-compat 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/ab15b608db7f57fee365048f8fa636a974c232fd">ab15b608</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:13:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update d/copyright with myself in debian/*
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/1ffd7557d6df0fb322ac872c367c75c72b8138ae">1ffd7557</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:14:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add missing DEP-12 fields
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fastaq/-/commit/b1038c707bc2cbb70cf1603d4e8bc6124314e0c5">b1038c70</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-04-17T12:14:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix whitespace
</pre>
</li>
</ul>
<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">
−
debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">fastaq (3.17.0-3) unstable; urgency=medium</span>
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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Use debhelper-compat 12.</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Remove RRID and fix EDAM syntax (Thanks Andreas Tille).</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Bump Standards-Version.</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Add missing DEP-12 fields.</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Update d/copyright with myself in debian/*</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> -- Sascha Steinbiss <satta@debian.org> Fri, 17 Apr 2020 11:59:51 +0200</span>
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">fastaq (3.17.0-2) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
12
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> * Use Salsa Vcs-* entries.</span>
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<li id="78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong>
deleted
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">11</span></pre>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,7 +5,7 @@ Uploaders: Andreas Tille <tille@debian.org>,</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Sascha Steinbiss <satta@debian.org></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Section: science</span>
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right"> (>= 11</span>),</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right">-compat (= 12</span>),</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> dh-python,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> python3,</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> python3-setuptools,</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -13,7 +13,7 @@ Build-Depends: debhelper (>= 11),</td>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> python3-nose,</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> samtools,</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> help2man</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">1.4</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5.0</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/fastaq</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/fastaq.git</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Homepage: https://github.com/sanger-pathogens/Fastaq</span>
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<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,6 +8,7 @@ License: GPL-3</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Files: debian/*</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Copyright: © 2014 Jorge Soares <j.s.soares@gmail.com></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> © 2015-2020 Sascha Steinbiss <satta@debian.org></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">License: GPL-3</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">License: GPL-3</span>
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<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,4 +28,4 @@ override_dh_installman:</td>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> --version-string=`PYTHONPATH=. scripts/fastaq version` scripts/fastaq</span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> sed -i 's/.SH DESCRIPTION/.SH DESCRIPTION\\n.nf/' debian/man/fastaq.1</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> scripts/fastaq 2>&1 | tail -n +13 | debian/make_man</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> dh_installman --</span></pre>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> dh_installman --</span></pre>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/fastaq/-/compare/58bf90a3509098de6799c06b638e4aed46053d45...b1038c707bc2cbb70cf1603d4e8bc6124314e0c5#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/sanger-pathogens/Fastaq/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/sanger-pathogens/Fastaq/issues/new</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">Repository: https://github.com/sanger-pathogens/Fastaq</span>
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1
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Registry:</span>
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2
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> - Name: OMICtools</span>
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3
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> Entry: OMICS_19987</span>
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4
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> - Name: bio.tools</span>
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5
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> Entry: NA</span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> </span></pre>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> </span></pre>
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