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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/igraph">Debian Med / igraph</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/igraph/-/commit/e0852e570f4b84f6f2f6a65c07f5133b94d94c10">e0852e57</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-20T21:21:55+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream patches relaxing tests to enable building on all architectures
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igraph/-/commit/8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd">8a4f570b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-20T21:25:15+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
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<h4>11 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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</li>
<li class="file-stats">
<a href="#c9ad6b0147985820ad60b9de2b18178ba7c7dccb">
<span class="new-file">
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debian/patches/01-fix-adjacency-spectral-embedding.patch
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</a>
</li>
<li class="file-stats">
<a href="#627e95e437be7aa349001aa93b7ef647c1442321">
<span class="new-file">
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debian/patches/02-fix-scg2-test-case.patch
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<li class="file-stats">
<a href="#f75af10eaaca2802cd90cdf8b25034c9f6e9d213">
<span class="new-file">
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debian/patches/03-fix-igraph-i-gml-tostring-static-var.patch
</span>
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<li class="file-stats">
<a href="#b5d47d9ddbf5d4398009743be99068e9efd3c567">
<span class="new-file">
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debian/patches/04-fix-igraph-layout-merge2-test-case.patch
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<li class="file-stats">
<a href="#cfa3197ed029e3cbe04ac2cee174843c9f0d7f99">
<span class="new-file">
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debian/patches/05-canonical-scg-grouping.patch
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<a href="#c193614656584b85d342a0954c909ac92a558daa">
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debian/patches/06-canonical-scg-eigenvectors.patch
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<li class="file-stats">
<a href="#e2f7e1798bb317e54329518e4bc7aa46e6e03363">
<span class="new-file">
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debian/patches/07-canonical-infomap.patch
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<li class="file-stats">
<a href="#1e2369762842688b571a14a63a97a950ebc4beca">
<span class="new-file">
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debian/patches/08-infomap-test-relaxation.patch
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<li class="file-stats">
<a href="#d2be03112dc56c3d0fe1319ffea362d218a88f98">
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debian/patches/09-hrg-test-relaxation.patch
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">igraph (0.8.1+ds-2) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">igraph (0.8.1+ds-2) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Drop --with-external-f2c (thanks for the hint to Szabolcs Horvát)</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> [ Tamás Nepusz ]</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Upstream patches relaxing tests to enable building on all architectures</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> <span class="idiff left right">Thu, 16 Apr 2020 19:11:44</span> +0200</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> <span class="idiff left right">Mon, 20 Apr 2020 21:22:20</span> +0200</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">igraph (0.8.1+ds-1) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<li id="c9ad6b0147985820ad60b9de2b18178ba7c7dccb">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#c9ad6b0147985820ad60b9de2b18178ba7c7dccb"><strong>debian/patches/01-fix-adjacency-spectral-embedding.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From 55f88af60e7d65e158226c0328eca38b6cd539d0 Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Thu, 16 Apr 2020 20:26:39 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] fix igraph_adjacency_spectral_embedding() test case</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> .../igraph_adjacency_spectral_embedding.c | 8 +++-</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> .../igraph_adjacency_spectral_embedding.out | 40 +++++++++----------</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/tests/test_utilities.inc | 25 ++++++++++++</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> 3 files changed, 51 insertions(+), 22 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"></span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff">diff --git a/examples/simple/igraph_adjacency_spectral_embedding.c b/examples/simple/igraph_adjacency_spectral_embedding.c</span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gh" style="color: #999;">index 2d0066c46..dea2a0ca3 100644</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_adjacency_spectral_embedding.c</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_adjacency_spectral_embedding.c</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="p">@@ -23,6 +23,8 @@</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> #include <igraph.h></span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include "../tests/test_utilities.inc"</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> /*</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> R</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="p">@@ -56,9 +58,11 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> /*scaled=*/ 0, &U, &V, /*D=*/ 0,</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> &cvec, &options);</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_matrix_printf(&U, "%8.4f");</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ /* eigenvectors are in the columns of U and V; make sure that the</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * first row contains positive values */</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ print_matrix_first_row_positive(&U, "%8.4f");</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> printf("--\n");</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_matrix_printf(&V, "%8.4f");</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ print_matrix_first_row_positive(&V, "%8.4f");</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> igraph_vector_destroy(&cvec);</span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"> igraph_matrix_destroy(&V);</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_adjacency_spectral_embedding.out b/examples/simple/igraph_adjacency_spectral_embedding.out</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gh" style="color: #999;">index 2e1ede0c4..78e52cf12 100644</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_adjacency_spectral_embedding.out</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_adjacency_spectral_embedding.out</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="p">@@ -1,21 +1,21 @@</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.5877 0.0000 0.7948 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.5689 0.7015 -0.4032 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.5689 -0.7015 -0.4032 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.0330 0.0000 0.1302 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.0320 0.0511 -0.0660 0.1236</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.0320 0.0511 -0.0660 0.5430</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.0320 0.0511 -0.0660 -0.6667</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.0320 -0.0511 -0.0660 0.1819</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.5877 0.0000 0.7948 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.5689 0.7015 -0.4032 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.0320 0.0511 -0.0660 0.1236</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.0320 0.0511 -0.0660 0.5430</span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.0320 -0.0511 -0.0660 0.1819</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.0320 -0.0511 -0.0660 0.2219</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.1934 0.2727 -0.2400 0.1236</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.1934 0.2727 -0.2400 -0.6667</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.1934 -0.2727 -0.2400 0.1819</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.1934 -0.2727 -0.2400 -0.4038</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -0.1934 -0.2727 -0.2400 0.2219</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.2914 0.0000 0.6560 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.5705 0.5262 -0.0063 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.5705 -0.5262 -0.0063 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1997 0.0000 0.4732 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 0.2727 -0.2400 0.1236</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 0.2727 -0.2400 0.5430</span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 0.2727 -0.2400 -0.6667</span></span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 -0.2727 -0.2400 0.1819</span></span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 -0.2727 -0.2400 -0.4038</span></span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ 0.1934 -0.2727 -0.2400 0.2219</span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/tests/test_utilities.inc b/examples/tests/test_utilities.inc</span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"><span class="gh" style="color: #999;">index 5df221b58..99140e2a4 100644</span></span>
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87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/tests/test_utilities.inc</span></span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/tests/test_utilities.inc</span></span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="p">@@ -57,4 +57,29 @@</span> void print_graph(const igraph_t *graph, FILE *f) {</span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"> fprintf(f, "}\n");</span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"> }</span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"> </span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+/* Print a matrix, ensuring that the first row contains positive elements only.</span></span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * Useful when the columns are eigenvectors. */</span></span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+void print_matrix_first_row_positive(const igraph_matrix_t *matrix, const char* format) {</span></span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_t copy;</span></span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long i, j, nrow, ncol;</span></span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_copy(©, matrix);</span></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ nrow = igraph_matrix_nrow(©);</span></span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ncol = igraph_matrix_ncol(©);</span></span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (nrow > 0) {</span></span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < ncol; i++) {</span></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (MATRIX(copy, 0, i) < 0) {</span></span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (j = 0; j < nrow; j++) {</span></span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ MATRIX(copy, j, i) *= -1;</span></span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_printf(©, format);</span></span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_destroy(©);</span></span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="diff"> #endif /* TEST_UTILITIES_INC */</span></pre>
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<li id="627e95e437be7aa349001aa93b7ef647c1442321">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#627e95e437be7aa349001aa93b7ef647c1442321"><strong>debian/patches/02-fix-scg2-test-case.patch</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From e3f48fe9241a6ff97b439f58720123c07b2aebb4 Mon Sep 17 00:00:00 2001</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Thu, 16 Apr 2020 20:46:36 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] ignore numeric inaccuracy in examples/simple/scg2.c test case</span></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> examples/simple/scg2.c | 27 +++++++++++++++++++++++++++</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/scg2.out | 8 ++++----</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> 2 files changed, 31 insertions(+), 4 deletions(-)</span>
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10
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff">diff --git a/examples/simple/scg2.c b/examples/simple/scg2.c</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gh" style="color: #999;">index aca184587..f54fc8de6 100644</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="p">@@ -63,6 +63,31 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> &Lsparse, &Rsparse); \</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> } while (0)</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#define FIXSMALL(eps) do { \</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long int i, j, ncol, nrow; \</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ncol = igraph_vector_complex_size(&eval); \</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < ncol; i++) { \</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs((double)IGRAPH_REAL(VECTOR(eval)[i])) < eps) { \</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_REAL(VECTOR(eval)[i]) = 0; \</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs((double)IGRAPH_IMAG(VECTOR(eval)[i])) < eps) { \</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_IMAG(VECTOR(eval)[i]) = 0; \</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ nrow = igraph_matrix_complex_nrow(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ncol = igraph_matrix_complex_ncol(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < nrow; i++) { \</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (j = 0; j < ncol; j++) { \</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs((double)IGRAPH_REAL(MATRIX(evec, i, j))) < eps) { \</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_REAL(MATRIX(evec, i, j)) = 0; \</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs((double)IGRAPH_IMAG(MATRIX(evec, i, j))) < eps) { \</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_IMAG(MATRIX(evec, i, j)) = 0; \</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } \</span></span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } while (0)</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"> #define PRINTRES() \</span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"> do { \</span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"> printf("--------------------------------\n"); \</span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="p">@@ -91,6 +116,7 @@</span> int main() {</span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"> </span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"> VECTOR(ev)[0] = 3;</span>
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50
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"> CALLSTO();</span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ FIXSMALL(1e-10);</span></span>
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52
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> PRINTRES();</span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"> igraph_destroy(&scg_graph);</span>
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54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"> igraph_sparsemat_destroy(&scg_sparsemat);</span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="p">@@ -101,6 +127,7 @@</span> int main() {</span>
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56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"> VECTOR(ev)[0] = 1;</span>
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57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"> VECTOR(ev)[1] = 3;</span>
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58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"> CALLSTO();</span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ FIXSMALL(1e-10);</span></span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"> PRINTRES();</span>
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61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"> igraph_destroy(&scg_graph);</span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"> igraph_sparsemat_destroy(&scg_sparsemat);</span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg2.out b/examples/simple/scg2.out</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gh" style="color: #999;">index 6b83919e1..509a3f03a 100644</span></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg2.out</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg2.out</span></span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="p">@@ -44,10 +44,10 @@</span> col 0: locations 0 to 0</span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"> 2 3 1 2 4 4 4 0 0 0</span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> 0.866025+0i</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--3.14295e-16+0i</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0+0i</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"> 0.316228+0i</span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"> -0.316228+0i</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--3.26134e-16+0i</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"> 0.365148+0i</span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"> 0.365148+0i</span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"> 0.365148+0i</span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"><span class="p">@@ -106,10 +106,10 @@</span> col 4: locations 8 to 8</span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"> 2 3 1 2 4 4 4 0 0 0</span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"> ---</span>
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83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"> 1+0i 0.866025+0i</span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i -3.14295e-16+0i</span></span>
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<li id="f75af10eaaca2802cd90cdf8b25034c9f6e9d213">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#f75af10eaaca2802cd90cdf8b25034c9f6e9d213"><strong>debian/patches/03-fix-igraph-i-gml-tostring-static-var.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From f03d9142577f035a878e81b0cdab334974d35d00 Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Thu, 16 Apr 2020 21:27:10 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] fixed igraph_i_gml_tostring() that accidentally returned the</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> address of a local variable</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> src/foreign.c | 2 +-</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> 1 file changed, 1 insertion(+), 1 deletion(-)</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff">diff --git a/src/foreign.c b/src/foreign.c</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gh" style="color: #999;">index 38dbd0b05..6019b93c8 100644</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/foreign.c</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/foreign.c</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="p">@@ -1028,7 +1028,7 @@</span> static igraph_real_t igraph_i_gml_toreal(igraph_gml_tree_t *node, long int pos)</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> static const char *igraph_i_gml_tostring(igraph_gml_tree_t *node, long int pos) {</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> int type = igraph_gml_tree_type(node, pos);</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- char tmp[256];</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ static char tmp[256];</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> const char *p = tmp;</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> long int i;</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> igraph_real_t d;</span></pre>
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<li id="b5d47d9ddbf5d4398009743be99068e9efd3c567">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#b5d47d9ddbf5d4398009743be99068e9efd3c567"><strong>debian/patches/04-fix-igraph-layout-merge2-test-case.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From c7fa48790b35a5c5bcd2739ee4f177084061a454 Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Thu, 16 Apr 2020 21:27:25 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] fixed igraph_layout_merge2() test case; MDS layout was</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> unstable so we use a circle now</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/igraph_layout_merge2.c | 19 ++++++++++++-----</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/simple/igraph_layout_merge2.out | 26 ++++++++++++------------</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> 2 files changed, 27 insertions(+), 18 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"></span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff">diff --git a/examples/simple/igraph_layout_merge2.c b/examples/simple/igraph_layout_merge2.c</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gh" style="color: #999;">index 9420d7faa..999e86a0c 100644</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_layout_merge2.c</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_layout_merge2.c</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="p">@@ -28,6 +28,7 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> igraph_matrix_t small_coords, big_coords, merged_coords;</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> igraph_vector_ptr_t graph_ptr, coords_ptr;</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> igraph_arpack_options_t arpack_opts;</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long int i, j, nrow, ncol;</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> /* To make things reproducible */</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> igraph_rng_seed(igraph_rng_default(), 42);</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="p">@@ -43,12 +44,10 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> igraph_arpack_options_init(&arpack_opts);</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> igraph_matrix_init(&big_coords, 0, 0);</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_layout_mds(&big, &big_coords, /*dist=*/ 0, /*dim=*/ 2,</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- &arpack_opts);</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_layout_circle(&big, &big_coords, igraph_vss_all());</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> igraph_matrix_init(&small_coords, 0, 0);</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_layout_mds(&small, &small_coords, /*dist=*/ 0, /*dim=*/ 2,</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- &arpack_opts);</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_layout_circle(&small, &small_coords, igraph_vss_all());</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> igraph_vector_ptr_init(&graph_ptr, 2);</span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"> igraph_vector_ptr_init(&coords_ptr, 2);</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="p">@@ -60,7 +59,17 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> igraph_layout_merge_dla(&graph_ptr, &coords_ptr, &merged_coords);</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_matrix_print(&merged_coords);</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ nrow = igraph_matrix_nrow(&merged_coords);</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ncol = igraph_matrix_ncol(&merged_coords);</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < nrow; i++) {</span></span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (j = 0; j < ncol; j++) {</span></span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs((double)MATRIX(merged_coords, i, j)) < 1e-8) {</span></span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ MATRIX(merged_coords, i, j) = 0;</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_printf(&merged_coords, "%.4f");</span></span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"> igraph_matrix_destroy(&merged_coords);</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"> igraph_matrix_destroy(&small_coords);</span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_layout_merge2.out b/examples/simple/igraph_layout_merge2.out</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gh" style="color: #999;">index dfe2c224b..12f15619e 100644</span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_layout_merge2.out</span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_layout_merge2.out</span></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"><span class="p">@@ -1,13 +1,13 @@</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--2.73912 -2.95429</span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.479512 -4.00008</span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1.96326 -3.51798</span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3.65613 -1.69214</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3.95248 0.780051</span></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2.73912 2.95429</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0.479512 4.00008</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--1.96326 3.51798</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--3.65613 1.69214</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--3.95248 -0.780051</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--1.6061 6.30088</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--4.92661 5.80435</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--3.69637 8.92826</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+4.0748 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3.2966 2.3951</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1.2592 3.8754</span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-1.2592 3.8754</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-3.2966 2.3951</span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-4.0748 0.0000</span></span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-3.2966 -2.3951</span></span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-1.2592 -3.8754</span></span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1.2592 -3.8754</span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3.2966 -2.3951</span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-1.7741 7.3663</span></span>
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-4.7586 9.0894</span></span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+-4.7586 5.6432</span></span></pre>
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<li id="cfa3197ed029e3cbe04ac2cee174843c9f0d7f99">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#cfa3197ed029e3cbe04ac2cee174843c9f0d7f99"><strong>debian/patches/05-canonical-scg-grouping.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From ea59c9a4bd6696ef4621ec549d9aa91bd47a6713 Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Fri, 17 Apr 2020 19:13:06 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] SCG: canonicalize the calculated groupings to make the test</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> cases deterministic</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/igraph_scg_grouping.out | 2 +-</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/simple/igraph_scg_grouping2.out | 4 +-</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> examples/simple/igraph_scg_grouping3.out | 6 +-</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> examples/simple/igraph_scg_grouping4.out | 8 +-</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> .../simple/igraph_scg_semiprojectors2.out | 12 +-</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> .../simple/igraph_scg_semiprojectors3.out | 12 +-</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> examples/simple/scg2.out | 160 +++++++--------</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> examples/simple/scg3.out | 190 +++++++++---------</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> src/scg.c | 3 +</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> 9 files changed, 200 insertions(+), 197 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff">diff --git a/examples/simple/igraph_scg_grouping.out b/examples/simple/igraph_scg_grouping.out</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gh" style="color: #999;">index fde1be9b7..087cec53a 100644</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_grouping.out</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_grouping.out</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="p">@@ -1 +1 @@</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 1 3 2 4 4 3 5 3 3 5 0 3 0 5 1 1 0 0 4 0 4 4 1 4 4 5 0 4 0 1 1 1 0 4 5 5 3 1 5 3 5 1 4 1 4 5 1 3 0 4 4 4 5 5 4 5 1 0 1 1 4 5 2 2 2 0 1 1 4 4 5 2 4 4 3 1 0 4 2 4 1 2 1 3 0 2 1 4 4 3 2 4 5 1 5 3 4 0 5 4 1 4 0 3 4 0 0 2 4 2 5 1 0 1 3 4 2 1 2 3 5 2 2 5 2 4 4 4 0 1 4 2 3 0 4 4 1 5 4 5 2 3 4 4 4 4 4 4 4 1 3 2 0 4 1 0 4 1 0 4 1 0 5 5 1 4 3 2 4 5 2 2 1 4 0 2 3 4 1 4 0 0 1 2 5 2 1 4 0 0 1 1 5 5 2 2 2 4 2 1 0 1 5 2 2 0 1 3 4 1 5 1 2 5 2 4 2 0 1 0 1 5 4 0 4 0 4 1 4 1 5 1 5 2 4 5 0 4 0 3 4 1 4 1 5 0 4 4 2 5 2 1 3 1 1 4 1 0 1 2 3 1 5 4 4 1 1 5 1 3 5 1 4 1 1 1 0 1 5 0 0 1 2 4 0 4 3 0 5 0 4 2 4 3 4 5 0 5 5 2 1 2 4 1 2 2 1 5 4 0 2 5 5 3 1 5 5 0 0 4 5 3 5 1 1 5 3 3 3 3 4 2 3 2 0 1 1 1 4 5 4 4 1 1 1 2 2 2 3 3 4 5 2 1 2 3 4 1 0 1 1 0 0 3 5 4 1 2 3 3 1 1 4 4 1 2 4 0 2 1 4 4 4 3 4 4 3 3 4 4 4 3 1 3 2 4 2 1 3 3 4 3 1 4 5 4 4 3 0 0 4 5 5 0 1 5 1 1 3 4 4 4 1 4 3 0 2 2 3 5 3 2 1 3 4 1 4 1 4 4 1 0 4 3 2 1 0 5 1 1 4 2 2 3 0 2 4 2 1 2 1 1 4 2 3 5 5 4 1 5 4 4 4 5 0 1 3 3 2 1 4 1 1 5 2 2 2 5 2 2 4 0 2 2 1 3 0 5 5 5 4 0 4 0 4 0 2 1 0 3 3 2 1 1 4 2 5 1 3 2 1 4 4 3 1 5 1 2 2 3 1 0 5 0 5 3 4 4 1 4 1 1 5 4 1 0 5 2 4 4 1 3 4 1 4 5 5 1 2 1 4 4 5 3 5 5 0 5 2 1 4 5 0 4 4 2 1 2 5 4 1 1 5 5 1 2 3 2 1 1 2 4 0 5 5 5 0 4 3 2 4 1 4 5 5 2 3 1 4 1 5 4 1 3 1 2 1 1 4 3 4 1 5 1 5 5 4 2 2 5 1 5 1 1 0 2 5 4 4 2 1 1 4 4 4 5 2 3 0 1 0 4 2 4 1 1 4 4 3 2 0 3 2 2 1 4 3 2 0 4 4 3 0 4 1 2 0 1 4 1 4 1 0 3 2 3 3 1 2 1 4 2 2 3 0 0 4 4 1 1 4 0 5 2 4 4 5 1 2 4 2 2 5 3 4 1 2 3 4 2 0 1 4 5 1 0 4 5 1 1 4 0 5 4 4 0 2 0 4 3 1 2 0 5 5 1 1 0 3 4 5 4 5 1 4 2 1 4 4 3 1 2 4 2 5 0 2 2 4 3 5 4 3 0 0 1 2 1 1 5 1 1 5 0 1 3 4 1 2 4 5 1 1 0 2 4 1 5 4 1 5 1 2 3 0 4 1 4 4 4 5 4 1 0 5 5 5 5 1 5 4 5 3 4 1 2 1 4 2 3 5 5 5 5 5 2 4 0 4 1 1 0 1 5 5 4 4 0 4 5 0 1 1 3 5 2 4 3 0 1 0 3 4 1 4 4 4 1 1 1 1 1 5 5 0 1 2 3 3 5 3 5 4 2 5 2 5 3 1 4 2 4 1 1 4 1 4 4 0 3 1 3 3 2 4 3 3 3 5 3 0 2 1 3 5 4 2 5 3 5 1 4 0 4 0 5 2 4 1 1 3 1 0 4 1 3 4 2 4 3 4 1 4 1 0 0 0 5 4 3 4 1 3 2 3 0 4 4 3 3 0 3 4 0 4 5 1 3 4 1 2 0 2 3 3 4 2 4 3 1 4 1 1 1 1 4 4 2 2 1 1 1 4 0 1 1 1 1 4</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_scg_grouping2.out b/examples/simple/igraph_scg_grouping2.out</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gh" style="color: #999;">index 54b0ed2d3..31407d3aa 100644</span></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_grouping2.out</span></span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_grouping2.out</span></span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="p">@@ -1,4 +1,4 @@</span></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> 0 1 1 2 2 2 2 2 2 2</span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 0 0 2 2 2 2 2 2 2</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 0 0 2 2 2 2 2 2 2</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 0 1 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 0 1 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> 0 1 1 2 3 3 3 3 3 3</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_scg_grouping3.out b/examples/simple/igraph_scg_grouping3.out</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gh" style="color: #999;">index c6fc1006d..3dbed8861 100644</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_grouping3.out</span></span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_grouping3.out</span></span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="p">@@ -1,5 +1,5 @@</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> 0.433013 0.57735 0.57735 0.144338 0.144338 0.144338 0.144338 0.144338 0.144338 0.144338</span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"> 0 1 1 0 2 2 2 2 2 2</span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 2 0 2 2 2 2 2 2</span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 2 0 2 2 2 2 2 2</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 2 0 3 3 3 3 3 3</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_scg_grouping4.out b/examples/simple/igraph_scg_grouping4.out</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gh" style="color: #999;">index a137ff8f7..b03883f5e 100644</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_grouping4.out</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_grouping4.out</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="p">@@ -1,4 +1,4 @@</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 2 2 1 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 2 2 1 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 2 2 1 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 3 3 2 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1 1 2 2 2 2 2 2 2</span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1 1 2 2 2 2 2 2 2</span></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1 1 2 3 3 3 3 3 3</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_scg_semiprojectors2.out b/examples/simple/igraph_scg_semiprojectors2.out</span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gh" style="color: #999;">index 9faabe167..1fbe20a99 100644</span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_semiprojectors2.out</span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_semiprojectors2.out</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="p">@@ -8,31 +8,31 @@</span></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"> 0 0 0 0 1 1 1 1 1 1</span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_scg_semiprojectors3.out b/examples/simple/igraph_scg_semiprojectors3.out</span></span>
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"><span class="gh" style="color: #999;">index d3d2b3d6a..5b158ccaa 100644</span></span>
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_scg_semiprojectors3.out</span></span>
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_scg_semiprojectors3.out</span></span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 0 1 0 0 0 0 0 0</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 0 0 1 1 1 1 1 1</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="diff"> ---</span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg2.out b/examples/simple/scg2.out</span></span>
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141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="diff"><span class="gh" style="color: #999;">index 509a3f03a..1a0a07e0d 100644</span></span>
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142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg2.out</span></span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg2.out</span></span>
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="diff"><span class="p">@@ -41,7 +41,7 @@</span> col 0: locations 0 to 0</span>
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="diff"> 0 9 : 1</span>
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3 1 2 4 4 4 0 0 0</span></span>
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="diff"> 0.866025+0i</span>
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="diff"> 0+0i</span>
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="diff"><span class="p">@@ -55,55 +55,55 @@</span> col 0: locations 0 to 0</span>
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="diff"> -0.365148+0i</span>
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="diff"> 0 1</span>
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160
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171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 1</span></span>
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172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+4 2</span></span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="diff"> ---</span>
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174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 0: locations 0 to 0</span></span>
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175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : 0.75</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 1: locations 1 to 2</span></span>
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177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : 0.25</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 : 1</span></span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 2: locations 3 to 5</span></span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 0.25</span></span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 0: locations 0 to 2</span></span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="diff"> 1 : 0.25</span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : 0.5</span></span>
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184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 3: locations 6 to 7</span></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="diff"> 2 : 0.25</span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.5</span></span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 1: locations 3 to 4</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.25</span></span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : 1</span></span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 2: locations 5 to 6</span></span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.25</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="diff"> 4 : 1</span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 3: locations 7 to 7</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : 0.75</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="diff"> col 4: locations 8 to 8</span>
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 0.75</span></span>
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 0 : 0.75</span></span>
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 1 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3 : 0.25</span></span>
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203
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 0 : 1</span></span>
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210
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 : 1</span></span>
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212
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213
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+2 : 0.75</span></span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 : 0.75</span></span>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 3 : 0.25</span></span>
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3 1 2 4 4 4 0 0 0</span></span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1 2 0 3 3 3 4 4 4</span></span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="diff"> 1+0i 0.866025+0i</span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="diff"> -0.316228+0i 0+0i</span>
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="diff"><span class="p">@@ -117,50 +117,50 @@</span> col 4: locations 8 to 8</span>
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="diff"> -0.316228+0i -0.365148+0i</span>
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="diff"> 0 1</span>
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2</span></span>
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 1</span></span>
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3</span></span>
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 2</span></span>
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270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 0: locations 0 to 0</span></span>
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271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : 0.75</span></span>
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272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 1: locations 1 to 2</span></span>
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273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : 0.25</span></span>
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274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 : 1</span></span>
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275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 2: locations 3 to 5</span></span>
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276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 0.25</span></span>
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277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 0: locations 0 to 2</span></span>
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278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="diff"> 1 : 0.25</span>
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279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : 0.5</span></span>
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280
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<pre style="margin: 0;">+<span id="LC280" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 3: locations 6 to 7</span></span>
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281
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="diff"> 2 : 0.25</span>
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282
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.5</span></span>
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283
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 1: locations 3 to 4</span></span>
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284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.25</span></span>
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285
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<pre style="margin: 0;">+<span id="LC285" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : 1</span></span>
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286
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 2: locations 5 to 6</span></span>
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287
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<pre style="margin: 0;">+<span id="LC287" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 0.25</span></span>
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288
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="diff"> 4 : 1</span>
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289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 3: locations 7 to 7</span></span>
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290
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : 0.75</span></span>
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291
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<pre style="margin: 0;">+<span id="LC291" class="line" lang="diff"> col 4: locations 8 to 8</span>
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292
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 0.75</span></span>
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293
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">----</span></span>
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294
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 0 : 0.75</span></span>
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<pre style="margin: 0;">+<span id="LC295" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 1 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3 : 0.25</span></span>
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301
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 7 : 0.333333</span></span>
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302
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<pre style="margin: 0;">+<span id="LC302" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 8 : 0.333333</span></span>
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304
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">----</span></span>
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305
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<pre style="margin: 0;">+<span id="LC305" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 0 : 1</span></span>
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306
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<pre style="margin: 0;">+<span id="LC306" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 1 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2 : 1</span></span>
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308
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<pre style="margin: 0;">+<span id="LC308" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 3 : 1</span></span>
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309
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-4 4 : 1</span></span>
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310
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-4 5 : 1</span></span>
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311
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<pre style="margin: 0;">+<span id="LC311" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-4 6 : 1</span></span>
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312
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<pre style="margin: 0;">+<span id="LC312" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 7 : 1</span></span>
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313
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 8 : 1</span></span>
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314
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<pre style="margin: 0;">+<span id="LC314" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 9 : 1</span></span>
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315
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<pre style="margin: 0;">+<span id="LC315" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+2 : 0.75</span></span>
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316
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<pre style="margin: 0;">+<span id="LC316" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+---</span></span>
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317
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<pre style="margin: 0;">+<span id="LC317" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 0 : 0.75</span></span>
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318
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 1 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC338" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC339" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg3.out b/examples/simple/scg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="diff"><span class="gh" style="color: #999;">index 93ab8affe..34424f032 100644</span></span>
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="diff"><span class="p">@@ -1,5 +1,5 @@</span></span>
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -1</span></span>
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 1: locations 3 to 4</span></span>
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : 1</span></span>
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370
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<pre style="margin: 0;">+<span id="LC370" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -3</span></span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 2: locations 5 to 6</span></span>
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372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 1: locations 3 to 5</span></span>
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373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : 4</span></span>
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374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : -2</span></span>
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375
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<pre style="margin: 0;">+<span id="LC375" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : -1</span></span>
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376
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<pre style="margin: 0;">+<span id="LC376" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 2: locations 6 to 7</span></span>
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377
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<pre style="margin: 0;">+<span id="LC377" class="line" lang="diff"> 2 : 1</span>
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378
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<pre style="margin: 0;">+<span id="LC378" class="line" lang="diff"> 0 : -1</span>
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379
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 3: locations 7 to 9</span></span>
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380
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 4</span></span>
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381
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<pre style="margin: 0;">+<span id="LC381" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 : -2</span></span>
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382
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<pre style="margin: 0;">+<span id="LC382" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : -1</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 3: locations 8 to 9</span></span>
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384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : 1</span></span>
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385
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<pre style="margin: 0;">+<span id="LC385" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : -3</span></span>
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386
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="diff"> ---</span>
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387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="diff"> 0 0 : 1</span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 1 : 0.5</span></span>
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389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 2 : 0.5</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 1 : 0.5</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 2 : 0.5</span></span>
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392
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<pre style="margin: 0;">+<span id="LC392" class="line" lang="diff"> 2 3 : 1</span>
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393
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<pre style="margin: 0;">+<span id="LC393" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 4 : 0.166667</span></span>
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<pre style="margin: 0;">+<span id="LC429" class="line" lang="diff"> 2.83255+0i</span>
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<pre style="margin: 0;">+<span id="LC431" class="line" lang="diff"><span class="p">@@ -72,52 +72,52 @@</span> col 3: locations 7 to 9</span>
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<pre style="margin: 0;">+<span id="LC435" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 3</span></span>
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<pre style="margin: 0;">+<span id="LC436" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 2</span></span>
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<pre style="margin: 0;">+<span id="LC444" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 3</span></span>
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<pre style="margin: 0;">+<span id="LC445" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+2 0</span></span>
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<pre style="margin: 0;">+<span id="LC446" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 1</span></span>
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<pre style="margin: 0;">+<span id="LC447" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC448" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 0: locations 0 to 1</span></span>
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<pre style="margin: 0;">+<span id="LC449" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC450" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -1</span></span>
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<pre style="margin: 0;">+<span id="LC451" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 1: locations 2 to 3</span></span>
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<pre style="margin: 0;">+<span id="LC452" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC453" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : -3</span></span>
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<pre style="margin: 0;">+<span id="LC454" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 2: locations 4 to 6</span></span>
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<pre style="margin: 0;">+<span id="LC455" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 : 4</span></span>
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<pre style="margin: 0;">+<span id="LC456" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -2</span></span>
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<pre style="margin: 0;">+<span id="LC457" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 0: locations 0 to 2</span></span>
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<pre style="margin: 0;">+<span id="LC458" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : 3</span></span>
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459
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<pre style="margin: 0;">+<span id="LC459" class="line" lang="diff"> 1 : -1</span>
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<pre style="margin: 0;">+<span id="LC460" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 3: locations 7 to 9</span></span>
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<pre style="margin: 0;">+<span id="LC461" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 3</span></span>
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462
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<pre style="margin: 0;">+<span id="LC462" class="line" lang="diff"> 2 : -1</span>
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463
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<pre style="margin: 0;">+<span id="LC463" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 1: locations 3 to 5</span></span>
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<pre style="margin: 0;">+<span id="LC464" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : 4</span></span>
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465
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<pre style="margin: 0;">+<span id="LC465" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : -2</span></span>
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466
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<pre style="margin: 0;">+<span id="LC466" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : -1</span></span>
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467
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<pre style="margin: 0;">+<span id="LC467" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 2: locations 6 to 7</span></span>
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<pre style="margin: 0;">+<span id="LC468" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+2 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC469" class="line" lang="diff"> 0 : -1</span>
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<pre style="margin: 0;">+<span id="LC470" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 3: locations 8 to 9</span></span>
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<pre style="margin: 0;">+<span id="LC471" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC472" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : -3</span></span>
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<pre style="margin: 0;">+<span id="LC474" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 0 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC475" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 1 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC476" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-2 2 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC478" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 4 : 0.166667</span></span>
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<pre style="margin: 0;">+<span id="LC518" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 3 3 2 1 1 1 1 1 1</span></span>
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<pre style="margin: 0;">+<span id="LC519" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1 1 2 3 3 3 3 3 3</span></span>
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<pre style="margin: 0;">+<span id="LC521" class="line" lang="diff"> 5.52892+0i 2.83255+0i</span>
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<pre style="margin: 0;">+<span id="LC522" class="line" lang="diff"> -0.493741+0i 0.749697+0i</span>
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<pre style="margin: 0;">+<span id="LC523" class="line" lang="diff"><span class="p">@@ -131,47 +131,47 @@</span> col 3: locations 7 to 9</span>
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<pre style="margin: 0;">+<span id="LC524" class="line" lang="diff"> -0.125815+0i -0.145872+0i</span>
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<pre style="margin: 0;">+<span id="LC525" class="line" lang="diff"> -0.125815+0i -0.145872+0i</span>
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<pre style="margin: 0;">+<span id="LC527" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 1</span></span>
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<pre style="margin: 0;">+<span id="LC528" class="line" lang="diff"> 0 2</span>
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<pre style="margin: 0;">+<span id="LC529" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 3</span></span>
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<pre style="margin: 0;">+<span id="LC531" class="line" lang="diff"> 1 3</span>
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<pre style="margin: 0;">+<span id="LC532" class="line" lang="diff"> 2 0</span>
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<pre style="margin: 0;">+<span id="LC533" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 0</span></span>
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<pre style="margin: 0;">+<span id="LC534" class="line" lang="diff"> 3 1</span>
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<pre style="margin: 0;">+<span id="LC536" class="line" lang="diff"> col 0: locations 0 to 2</span>
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537
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<pre style="margin: 0;">+<span id="LC537" class="line" lang="diff"> 0 : 3</span>
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538
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<pre style="margin: 0;">+<span id="LC538" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -1</span></span>
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<pre style="margin: 0;">+<span id="LC539" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : -1</span></span>
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540
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<pre style="margin: 0;">+<span id="LC540" class="line" lang="diff"> 2 : -1</span>
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<pre style="margin: 0;">+<span id="LC541" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 1: locations 3 to 4</span></span>
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<pre style="margin: 0;">+<span id="LC542" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : 1</span></span>
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543
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<pre style="margin: 0;">+<span id="LC543" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : -3</span></span>
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<pre style="margin: 0;">+<span id="LC544" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 2: locations 5 to 6</span></span>
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<pre style="margin: 0;">+<span id="LC545" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 1: locations 3 to 5</span></span>
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<pre style="margin: 0;">+<span id="LC546" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : 4</span></span>
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547
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<pre style="margin: 0;">+<span id="LC547" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+0 : -2</span></span>
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548
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<pre style="margin: 0;">+<span id="LC548" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : -1</span></span>
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549
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<pre style="margin: 0;">+<span id="LC549" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 2: locations 6 to 7</span></span>
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550
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<pre style="margin: 0;">+<span id="LC550" class="line" lang="diff"> 2 : 1</span>
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551
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<pre style="margin: 0;">+<span id="LC551" class="line" lang="diff"> 0 : -1</span>
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552
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<pre style="margin: 0;">+<span id="LC552" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-col 3: locations 7 to 9</span></span>
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<pre style="margin: 0;">+<span id="LC553" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 : 4</span></span>
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<pre style="margin: 0;">+<span id="LC554" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0 : -2</span></span>
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<pre style="margin: 0;">+<span id="LC555" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 : -1</span></span>
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<pre style="margin: 0;">+<span id="LC556" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+col 3: locations 8 to 9</span></span>
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<pre style="margin: 0;">+<span id="LC557" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 : 1</span></span>
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558
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<pre style="margin: 0;">+<span id="LC558" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 : -3</span></span>
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559
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<pre style="margin: 0;">+<span id="LC559" class="line" lang="diff"> ---</span>
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560
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<pre style="margin: 0;">+<span id="LC560" class="line" lang="diff"> 0 0 : 1</span>
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561
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<pre style="margin: 0;">+<span id="LC561" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 1 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC562" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-3 2 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC563" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 1 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC564" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+1 2 : 0.5</span></span>
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<pre style="margin: 0;">+<span id="LC565" class="line" lang="diff"> 2 3 : 1</span>
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<pre style="margin: 0;">+<span id="LC566" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 4 : 0.166667</span></span>
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567
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<pre style="margin: 0;">+<span id="LC567" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-1 5 : 0.166667</span></span>
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<pre style="margin: 0;">+<span id="LC592" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 5 : 1</span></span>
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<pre style="margin: 0;">+<span id="LC593" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 6 : 1</span></span>
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594
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<pre style="margin: 0;">+<span id="LC594" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 7 : 1</span></span>
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595
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<pre style="margin: 0;">+<span id="LC595" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 8 : 1</span></span>
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596
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<pre style="margin: 0;">+<span id="LC596" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+3 9 : 1</span></span>
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597
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<pre style="margin: 0;">+<span id="LC597" class="line" lang="diff"> ---</span>
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598
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<pre style="margin: 0;">+<span id="LC598" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/src/scg.c b/src/scg.c</span></span>
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599
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<pre style="margin: 0;">+<span id="LC599" class="line" lang="diff"><span class="gh" style="color: #999;">index 64a2340f3..dde162270 100644</span></span>
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600
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<pre style="margin: 0;">+<span id="LC600" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/scg.c</span></span>
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601
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<pre style="margin: 0;">+<span id="LC601" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/scg.c</span></span>
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602
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<pre style="margin: 0;">+<span id="LC602" class="line" lang="diff"><span class="p">@@ -79,6 +79,7 @@</span></span>
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603
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<pre style="margin: 0;">+<span id="LC603" class="line" lang="diff"> #include "igraph_eigen.h"</span>
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604
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<pre style="margin: 0;">+<span id="LC604" class="line" lang="diff"> #include "igraph_interface.h"</span>
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605
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<pre style="margin: 0;">+<span id="LC605" class="line" lang="diff"> #include "igraph_structural.h"</span>
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606
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<pre style="margin: 0;">+<span id="LC606" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include "igraph_community.h"</span></span>
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607
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<pre style="margin: 0;">+<span id="LC607" class="line" lang="diff"> #include "igraph_constructors.h"</span>
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608
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<pre style="margin: 0;">+<span id="LC608" class="line" lang="diff"> #include "igraph_conversion.h"</span>
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609
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<pre style="margin: 0;">+<span id="LC609" class="line" lang="diff"> #include "igraph_memory.h"</span>
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610
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<pre style="margin: 0;">+<span id="LC610" class="line" lang="diff"><span class="p">@@ -468,6 +469,8 @@</span> int igraph_scg_grouping(const igraph_matrix_t *V,</span>
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611
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<pre style="margin: 0;">+<span id="LC611" class="line" lang="diff"> igraph_matrix_int_destroy(&gr_mat);</span>
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612
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<pre style="margin: 0;">+<span id="LC612" class="line" lang="diff"> IGRAPH_FINALLY_CLEAN(1);</span>
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613
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<pre style="margin: 0;">+<span id="LC613" class="line" lang="diff"> </span>
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614
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<pre style="margin: 0;">+<span id="LC614" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_CHECK(igraph_reindex_membership(groups, 0, 0));</span></span>
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615
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<pre style="margin: 0;">+<span id="LC615" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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616
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<pre style="margin: 0;">+<span id="LC616" class="line" lang="diff"> return 0;</span>
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617
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<pre style="margin: 0;">+<span id="LC617" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC618" class="line" lang="diff"> </span></pre>
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<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#c193614656584b85d342a0954c909ac92a558daa"><strong>debian/patches/06-canonical-scg-eigenvectors.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From 4af46a9fdfaba35b05e24f0d6d22cbd1818478bf Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Fri, 17 Apr 2020 20:05:02 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] more SCG test case fixes: canonicalize eigenvectors as well</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> examples/simple/scg2.c | 4 +-</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/scg2.out | 40 ++++++-------</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/simple/scg3.c | 4 +-</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> examples/simple/scg3.out | 40 ++++++-------</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> examples/tests/test_utilities.inc | 98 +++++++++++++++++++++++++++++--</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> 5 files changed, 138 insertions(+), 48 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff">diff --git a/examples/simple/scg2.c b/examples/simple/scg2.c</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gh" style="color: #999;">index f54fc8de6..65945a3ff 100644</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="p">@@ -23,6 +23,8 @@</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> #include <igraph.h></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include "../tests/test_utilities.inc"</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> int main() {</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> igraph_t g;</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="p">@@ -94,7 +96,7 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> igraph_vector_print(&groups); \</span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> printf("---\n"); \</span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> igraph_vector_complex_print(&eval); \</span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_matrix_complex_print(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ print_matrix_complex_first_row_positive(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> printf("---\n"); \</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> igraph_write_graph_edgelist(&scg_graph, stdout); \</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> printf("---\n"); \</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg2.out b/examples/simple/scg2.out</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gh" style="color: #999;">index 1a0a07e0d..b354eb1dd 100644</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg2.out</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg2.out</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="p">@@ -2,16 +2,16 @@</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> 0 0 0 0 0 0 0 0 0 0</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"> 1+0i</span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="p">@@ -106,16 +106,16 @@</span> col 4: locations 8 to 8</span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"> 0 1 2 0 3 3 3 4 4 4</span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> 1+0i 0.866025+0i</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i 0+0i</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--0.316228+0i -0.316228+0i</span></span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg3.c b/examples/simple/scg3.c</span></span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"><span class="gh" style="color: #999;">index 6e10461b1..ecbe57c35 100644</span></span>
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg3.c</span></span>
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg3.c</span></span>
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="p">@@ -23,6 +23,8 @@</span></span>
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"> #include <igraph.h></span>
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include "../tests/test_utilities.inc"</span></span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"> int main() {</span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"> </span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"> igraph_t g;</span>
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"><span class="p">@@ -67,7 +69,7 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="diff"> igraph_vector_print(&groups); \</span>
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="diff"> printf("---\n"); \</span>
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="diff"> igraph_vector_complex_print(&eval); \</span>
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_matrix_complex_print(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ print_matrix_complex_first_row_positive(&evec); \</span></span>
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="diff"> printf("---\n"); \</span>
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="diff"> igraph_write_graph_edgelist(&scg_graph, stdout); \</span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="diff"> printf("---\n"); \</span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/scg3.out b/examples/simple/scg3.out</span></span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="diff"><span class="gh" style="color: #999;">index 34424f032..98708b322 100644</span></span>
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/scg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/scg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="diff"><span class="p">@@ -2,16 +2,16 @@</span></span>
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="diff"> 0 1 1 2 3 3 3 3 3 3</span>
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="diff"> ---</span>
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="diff"><span class="p">@@ -120,16 +120,16 @@</span> col 3: locations 8 to 9</span>
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="diff"> 0 1 1 2 3 3 3 3 3 3</span>
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="diff"> 5.52892+0i 2.83255+0i</span>
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="diff"> 0 1</span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="diff"> 0 2</span>
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174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/tests/test_utilities.inc b/examples/tests/test_utilities.inc</span></span>
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175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="diff"><span class="gh" style="color: #999;">index 99140e2a4..2826d022a 100644</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/tests/test_utilities.inc</span></span>
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177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/tests/test_utilities.inc</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="diff"><span class="p">@@ -57,8 +57,60 @@</span> void print_graph(const igraph_t *graph, FILE *f) {</span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="diff"> fprintf(f, "}\n");</span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="diff"> }</span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="diff"> </span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-/* Print a matrix, ensuring that the first row contains positive elements only.</span></span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- * Useful when the columns are eigenvectors. */</span></span>
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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+/* Print a vector, ensuring that the first nonzero element is positive. */</span></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+void print_vector_first_nonzero_element_positive(const igraph_vector_t *vector, const char* format) {</span></span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_t copy;</span></span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long i, n;</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_copy(©, vector);</span></span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ n = igraph_vector_size(©);</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < n; i++) {</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (VECTOR(copy)[i] < 0) {</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (; i < n; i++) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ VECTOR(copy)[i] *= -1;</span></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else if (VECTOR(copy)[i] > 0) {</span></span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_printf(©, format);</span></span>
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205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_destroy(©);</span></span>
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206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+/* Print a complex vector, ensuring that the first element with nonzero real</span></span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * part has a positive real part. */</span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+void print_vector_complex_first_nonzero_real_part_positive(const igraph_vector_complex_t *vector) {</span></span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_complex_t copy;</span></span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long i, n;</span></span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_complex_copy(©, vector);</span></span>
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215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ n = igraph_vector_complex_size(©);</span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < n; i++) {</span></span>
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219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (IGRAPH_REAL(VECTOR(copy)[i]) < 0) {</span></span>
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (; i < n; i++) {</span></span>
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221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_REAL(VECTOR(copy)[i]) *= -1;</span></span>
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222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (IGRAPH_IMAG(VECTOR(copy)[i]) != 0) {</span></span>
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_IMAG(VECTOR(copy)[i]) *= -1;</span></span>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else if (IGRAPH_REAL(VECTOR(copy)[i]) > 0) {</span></span>
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_complex_print(©);</span></span>
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233
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_complex_destroy(©);</span></span>
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234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+/* Print a matrix, ensuring that the first nonzero element in each column is</span></span>
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * positive. */</span></span>
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="diff"> void print_matrix_first_row_positive(const igraph_matrix_t *matrix, const char* format) {</span>
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="diff"> igraph_matrix_t copy;</span>
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="diff"> long i, j, nrow, ncol;</span>
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241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="diff"><span class="p">@@ -68,12 +120,15 @@</span> void print_matrix_first_row_positive(const igraph_matrix_t *matrix, const char*</span>
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242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="diff"> nrow = igraph_matrix_nrow(©);</span>
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="diff"> ncol = igraph_matrix_ncol(©);</span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if (nrow > 0) {</span></span>
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246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- for (i = 0; i < ncol; i++) {</span></span>
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247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if (MATRIX(copy, 0, i) < 0) {</span></span>
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248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- for (j = 0; j < nrow; j++) {</span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < ncol; i++) {</span></span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (j = 0; j < nrow; j++) {</span></span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (MATRIX(copy, j, i) < 0) {</span></span>
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252
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (; j < nrow; j++) {</span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="diff"> MATRIX(copy, j, i) *= -1;</span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else if (MATRIX(copy, j, i) > 0) {</span></span>
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="diff"> }</span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="diff"> }</span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="diff"> }</span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="diff"><span class="p">@@ -82,4 +137,35 @@</span> void print_matrix_first_row_positive(const igraph_matrix_t *matrix, const char*</span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="diff"> igraph_matrix_destroy(©);</span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="diff"> }</span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="diff"> </span>
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265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+/* Print a complex matrix, ensuring that the first element with nonzero real</span></span>
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266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * part in each column has a positive real part. */</span></span>
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267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+void print_matrix_complex_first_row_positive(const igraph_matrix_complex_t *matrix) {</span></span>
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268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_complex_t copy;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long i, j, nrow, ncol;</span></span>
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270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_complex_copy(©, matrix);</span></span>
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272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ nrow = igraph_matrix_complex_nrow(©);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ncol = igraph_matrix_complex_ncol(©);</span></span>
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275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < ncol; i++) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (j = 0; j < nrow; j++) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (IGRAPH_REAL(MATRIX(copy, j, i)) < 0) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (; j < nrow; j++) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
280
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<pre style="margin: 0;">+<span id="LC280" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_REAL(MATRIX(copy, j, i)) *= -1;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
281
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (IGRAPH_IMAG(MATRIX(copy, j, i)) != 0) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
282
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_IMAG(MATRIX(copy, j, i)) *= -1;</span></span>
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283
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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285
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<pre style="margin: 0;">+<span id="LC285" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
286
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else if (IGRAPH_REAL(MATRIX(copy, j, i)) > 0) {</span></span>
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287
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<pre style="margin: 0;">+<span id="LC287" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ break;</span></span>
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288
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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290
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<td class="diff-line-num new new_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
291
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<pre style="margin: 0;">+<span id="LC291" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<td class="diff-line-num new new_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
292
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_complex_print(©);</span></span>
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_matrix_complex_destroy(©);</span></span>
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294
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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295
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<pre style="margin: 0;">+<span id="LC295" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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296
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="diff"> #endif /* TEST_UTILITIES_INC */</span></pre>
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<li id="e2f7e1798bb317e54329518e4bc7aa46e6e03363">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#e2f7e1798bb317e54329518e4bc7aa46e6e03363"><strong>debian/patches/07-canonical-infomap.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From 2a644aa2935509ac2449ea29cd4e3bba4fbc9cd7 Mon Sep 17 00:00:00 2001</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Fri, 17 Apr 2020 20:42:43 +0200</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] canonicalize the output of the Infomap algorithm as well</span></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> examples/simple/igraph_community_infomap.out | 14 +++++++-------</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> src/infomap.cc | 3 +++</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> 2 files changed, 10 insertions(+), 7 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff">diff --git a/examples/simple/igraph_community_infomap.out b/examples/simple/igraph_community_infomap.out</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gh" style="color: #999;">index 7d4fc6362..c8d4b4efe 100644</span></span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_community_infomap.out</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_community_infomap.out</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="p">@@ -1,22 +1,22 @@</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> # Two triangles connected by one edge</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> Codelength: 2.51787 (in 2 modules)</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 1 1 1 0 0 0 </span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 0 0 1 1 1 </span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> # Two 4-cliques (0123 and 4567) connected by two edges (0-4 and 1-5)</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> Codelength: 2.94884 (in 2 modules)</span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 1 1 1 1 0 0 0 0 </span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 0 0 0 1 1 1 1 </span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> # Two 4-cliques (0123 and 4567) connected by two edges (0-4 and 1-5)</span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> Codelength: 2.96655 (in 2 modules)</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 1 0 1 1 1 0 0 0 </span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 1 0 0 0 1 1 1 </span></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> # Zachary Karate club</span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> Codelength: 4.60606 (in 3 modules)</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 1 1 1 1 2 2 2 1 0 1 2 1 1 1 0 0 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 </span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 0 0 0 1 1 1 0 2 0 1 0 0 0 2 2 1 0 2 0 2 0 2 2 2 2 2 2 2 2 2 2 2 2 </span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> # Flow (from infomap_dir.tgz)</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> Codelength: 3.32773 (in 4 modules)</span>
</pre>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 3 3 3 3 0 0 0 0 1 1 1 1 2 2 2 2 </span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 0 0 0 1 1 1 1 2 2 2 2 3 3 3 3 </span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> # MultiphysChemBioEco40W_weighted_dir.net (from infomap_dir.tgz)</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> Codelength: 3.87095 (in 5 modules)</span>
</pre>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership: 0 0 0 0 0 0 0 0 0 0 3 3 3 0 3 3 0 3 3 3 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 4 2 2 </span></span>
</pre>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership: 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 1 1 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 3 4 3 3 </span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"> # Wiktionary english verbs (synonymy 2008)</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> |V|=7339 |E|=8293 directed=0</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> Codelength: 5.70863 (in 1444 modules)</span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership (1/100 of vertices): 392 200 6 14 2 126 106 3 32 95 98 136 86 67 61 159 142 396 607 54 272 194 213 157 794 616 170 866 36 13 205 98 25 280 460 302 87 911 243 804 835 399 807 953 1333 101 73 75 666 0 568 798 175 219 133 49 1080 179 525 199 197 517 109 1194 1218 827 733 214 38 881 522 1356 143 14 </span></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Membership (1/100 of vertices): 0 25 38 76 107 149 172 79 115 161 262 291 169 331 102 51 40 399 410 363 318 453 171 485 255 498 141 529 526 424 39 262 35 371 466 341 349 668 301 653 401 734 449 763 787 288 630 232 868 147 429 693 681 739 303 98 1033 528 923 245 459 1159 254 1210 1237 384 1276 97 214 579 1075 559 139 76 </span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/src/infomap.cc b/src/infomap.cc</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gh" style="color: #999;">index 5d38cbd89..9b8084bb7 100644</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/infomap.cc</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/infomap.cc</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="p">@@ -318,5 +318,8 @@</span> int igraph_community_infomap(const igraph_t * graph,</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"> delete fgraph;</span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> IGRAPH_FINALLY_CLEAN(1);</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ IGRAPH_CHECK(igraph_reindex_membership(membership, 0, 0));</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"> return IGRAPH_SUCCESS;</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"> }</span></pre>
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<li id="1e2369762842688b571a14a63a97a950ebc4beca">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#1e2369762842688b571a14a63a97a950ebc4beca"><strong>debian/patches/08-infomap-test-relaxation.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From c9c83a5240d249ee21f951bd84463c2698bb29af Mon Sep 17 00:00:00 2001</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Mon, 20 Apr 2020 15:12:00 +0200</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] Infomap test: don't check the exact partition for the</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> Wiktionary example, it is platform-dependent</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/igraph_community_infomap.c | 48 +++++++++++++-------</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/simple/igraph_community_infomap.out | 3 +-</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> 2 files changed, 32 insertions(+), 19 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff">diff --git a/examples/simple/igraph_community_infomap.c b/examples/simple/igraph_community_infomap.c</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gh" style="color: #999;">index 189e7b7d5..ca76cc430 100644</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_community_infomap.c</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_community_infomap.c</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="p">@@ -25,7 +25,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> #include <igraph.h></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-void gsumary(const igraph_t * g) {</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+void gsummary(const igraph_t * g) {</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> printf("|V|=%d |E|=%d directed=%d\n", (int)igraph_vcount(g), (int)igraph_ecount(g), (int)igraph_is_directed(g));</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="p">@@ -49,31 +49,36 @@</span> void show_results_lite(igraph_vector_t * membership, igraph_real_t codelength) {</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> printf("\n");</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-void infomap_weighted_test(const igraph_t * g, const igraph_vector_t *weights) {</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+igraph_real_t infomap_weighted_test(const igraph_t * g, const igraph_vector_t *weights, igraph_bool_t smoke_test) {</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> igraph_vector_t membership;</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> igraph_real_t codelength = 1000;</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> igraph_vector_init(&membership, 0);</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> igraph_community_infomap(/*in */ g, /*e_weight=*/ weights, NULL, /*nb_trials=*/5,</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> /*out*/ &membership, &codelength);</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if (igraph_vcount(g) > 500) {</span></span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- show_results_lite(&membership, codelength);</span></span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- } else {</span></span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- show_results(&membership, codelength);</span></span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (!smoke_test) {</span></span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (igraph_vcount(g) > 500) {</span></span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ show_results_lite(&membership, codelength);</span></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else {</span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ show_results(&membership, codelength);</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"> }</span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"> </span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"> igraph_vector_destroy(&membership);</span>
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50
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return codelength;</span></span>
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52
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> }</span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"> </span>
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54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"> </span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-void infomap_test(const igraph_t * g) {</span></span>
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56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_weighted_test(g, 0);</span></span>
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57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+igraph_real_t infomap_test(const igraph_t * g, igraph_bool_t smoke_test) {</span></span>
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58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return infomap_weighted_test(g, 0, smoke_test);</span></span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"> }</span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"> </span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"> int main() {</span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"> igraph_t g;</span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"> igraph_vector_t weights;</span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_real_t codelength;</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"> </span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"> igraph_rng_seed(igraph_rng_default(), 42);</span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"> </span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="p">@@ -84,7 +89,7 @@</span> int main() {</span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> 3, 4, 4, 5, 5, 3,</span>
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71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"> 0, 5,</span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"> -1);</span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_test(&g, /* smoke_test = */ 0);</span></span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"> igraph_destroy(&g);</span>
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76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"> //return 0;</span>
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77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"> </span>
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78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"><span class="p">@@ -95,12 +100,12 @@</span> int main() {</span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"> 7, 4, 7, 5, 7, 6, 4, 5, 4, 6, 5, 6, // 4-clique 4,5,6,7</span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"> 0, 4, 1, 5, //8, 0, 8, 4,</span>
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81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"> -1);</span>
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82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_test(&g, /* smoke_test = */ 0);</span></span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"> </span>
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85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"> printf("# Two 4-cliques (0123 and 4567) connected by two edges (0-4 and 1-5)\n");</span>
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86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"> igraph_add_edge(&g, 0, 4);</span>
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87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"> igraph_add_edge(&g, 1, 5);</span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_test(&g, /* smoke_test = */ 0);</span></span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"> igraph_destroy(&g);</span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"> </span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"> /* Zachary Karate club -- this is just a quick smoke test */</span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"><span class="p">@@ -123,7 +128,7 @@</span> int main() {</span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"> 28, 33, 29, 32, 29, 33, 30, 32, 30, 33,</span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"> 31, 32, 31, 33, 32, 33,</span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"> -1);</span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_test(&g, /* smoke_test = */ 0);</span></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"> igraph_destroy(&g);</span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"> </span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"> /* Flow.net that come in infomap_dir.tgz */</span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"><span class="p">@@ -134,7 +139,7 @@</span> int main() {</span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"> 8, 9, 9, 10, 10, 11, 11, 8, 9, 12,</span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"> 12, 13, 13, 14, 14, 15, 15, 12, 13, 0,</span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"> -1);</span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_test(&g, /* smoke_test = */ 0);</span></span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="diff"> igraph_destroy(&g);</span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="diff"> </span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="diff"> /* MultiphysChemBioEco40W_weighted_dir.net */</span>
</pre>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="diff"><span class="p">@@ -237,17 +242,26 @@</span> int main() {</span>
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112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="diff"> 9.0, 2.0, 2.0, 5.0, 4.0, 2.0, 7.0, 3.0,</span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="diff"> 3.0, 5.0, 8.0, 14.0, 3.0, 38.0, 3.0, 9.0,</span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="diff"> 2.0, 8.0, 21.0, 18.0, 58.0);</span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_weighted_test(&g, &weights);</span></span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ infomap_weighted_test(&g, &weights, /* smoke_test = */ 0);</span></span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="diff"> igraph_vector_destroy(&weights);</span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="diff"> igraph_destroy(&g);</span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="diff"> </span>
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120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- /* Two triangles connected by one edge */</span></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ /* Wiktionary English verbs -- this one is a bit flaky, igraph reports</span></span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * 1444 or 1445 modules, depending on the platform, so let's just run it as</span></span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * a quick smoke test but don't check the results too thoroughly as some</span></span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * changes are expected. We only check the codelength of the partition,</span></span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * this is more reliable. */</span></span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="diff"> printf("# Wiktionary english verbs (synonymy 2008)\n");</span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="diff"> FILE *wikt = fopen("wikti_en_V_syn.elist", "r");</span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="diff"> igraph_read_graph_edgelist(&g, wikt, 0, 0);</span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="diff"> fclose(wikt);</span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- gsumary(&g);</span></span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- infomap_test(&g);</span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ gsummary(&g);</span></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ codelength = infomap_test(&g, /* smoke_test = */ 1);</span></span>
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134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (fabs(codelength - 5.708) >= 1e-3) {</span></span>
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135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Codelength was %0.5f, expected %0.5f\n", codelength, 5.708);</span></span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ } else {</span></span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Codelength OK.\n");</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="diff"> igraph_destroy(&g);</span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="diff"> </span>
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141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="diff"> return 0;</span>
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142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_community_infomap.out b/examples/simple/igraph_community_infomap.out</span></span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="diff"><span class="gh" style="color: #999;">index c8d4b4efe..48c7d66c5 100644</span></span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_community_infomap.out</span></span>
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145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_community_infomap.out</span></span>
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146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="diff"><span class="p">@@ -18,5 +18,4 @@</span> Codelength: 3.87095 (in 5 modules)</span>
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147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="diff"> Membership: 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 1 0 1 1 1 2 2 2 2 2 2 2 2 2 2 3 3 3 3 3 3 3 4 3 3 </span>
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148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="diff"> # Wiktionary english verbs (synonymy 2008)</span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="diff"> |V|=7339 |E|=8293 directed=0</span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Codelength: 5.70863 (in 1444 modules)</span></span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-Membership (1/100 of vertices): 0 25 38 76 107 149 172 79 115 161 262 291 169 331 102 51 40 399 410 363 318 453 171 485 255 498 141 529 526 424 39 262 35 371 466 341 349 668 301 653 401 734 449 763 787 288 630 232 868 147 429 693 681 739 303 98 1033 528 923 245 459 1159 254 1210 1237 384 1276 97 214 579 1075 559 139 76 </span></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+Codelength OK.</span></span></pre>
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<li id="d2be03112dc56c3d0fe1319ffea362d218a88f98">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#d2be03112dc56c3d0fe1319ffea362d218a88f98"><strong>debian/patches/09-hrg-test-relaxation.patch</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From d44cd692ba41cf65fb0b934c6ecb79252513deb3 Mon Sep 17 00:00:00 2001</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">From: Tamas Nepusz <ntamas@gmail.com></span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Date: Mon, 20 Apr 2020 15:57:09 +0200</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Subject: [PATCH] relaxed test cases for HRG model; results are not consistent</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> on i386</span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">---</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> examples/simple/igraph_hrg2.c | 22 +++++++++++++++++++---</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> examples/simple/igraph_hrg2.out | 2 --</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> examples/simple/igraph_hrg3.c | 24 +++++++++++++++++++-----</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> examples/simple/igraph_hrg3.out | 2 --</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> tests/hrg.at | 4 ++--</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> 5 files changed, 40 insertions(+), 14 deletions(-)</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> delete mode 100644 examples/simple/igraph_hrg2.out</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> delete mode 100644 examples/simple/igraph_hrg3.out</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff">diff --git a/examples/simple/igraph_hrg2.c b/examples/simple/igraph_hrg2.c</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gh" style="color: #999;">index 67883d2dd..4652972eb 100644</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_hrg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_hrg2.c</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="p">@@ -27,6 +27,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> int main() {</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> igraph_t karate;</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> igraph_vector_t parents, weights;</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long int i, n;</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> igraph_rng_seed(igraph_rng_default(), 42);</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="p">@@ -65,9 +66,24 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> igraph_hrg_consensus(&karate, &parents, &weights, /* hrg= */ 0,</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> /* start= */ 0, /* num_samples= */ 100);</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- /* Check */</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_print(&parents);</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_print(&weights);</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ /* We do some simple validity tests on the resolts only; the exact results</span></span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * are different on i386 vs other platforms due to numerical inaccuracies */</span></span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (igraph_vector_size(&weights) + igraph_vcount(&karate) != igraph_vector_size(&parents)) {</span></span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Vector length mismatch: %ld + %ld != %ld\n",</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ (long int) igraph_vector_size(&weights), (long int) igraph_vcount(&karate),</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ (long int) igraph_vector_size(&parents)</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ );</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return 1;</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ n = igraph_vector_size(&parents);</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < n; i++) {</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (VECTOR(parents)[i] < -1 || VECTOR(parents)[i] >= igraph_vcount(&karate) + igraph_vector_size(&weights)) {</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Invalid parents vector:\n");</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_print(&parents);</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return 2;</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"> igraph_vector_destroy(&parents);</span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"> igraph_vector_destroy(&weights);</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_hrg2.out b/examples/simple/igraph_hrg2.out</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="p">deleted file mode 100644</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gh" style="color: #999;">index b066fcf12..000000000</span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_hrg2.out</span></span>
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61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ /dev/null</span></span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"><span class="p">@@ -1,2 +0,0 @@</span></span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-37 37 37 37 36 36 36 37 34 37 36 37 37 37 37 37 36 37 37 37 37 37 37 37 35 35 37 37 37 37 34 37 37 37 37 37 37 -1</span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-54 59 71 100</span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/examples/simple/igraph_hrg3.c b/examples/simple/igraph_hrg3.c</span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"><span class="gh" style="color: #999;">index afeec3cf6..c6196d16e 100644</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_hrg3.c</span></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/examples/simple/igraph_hrg3.c</span></span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="p">@@ -27,6 +27,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> int main() {</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"> igraph_t karate;</span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"> igraph_vector_t edges, prob;</span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ long int i, n;</span></span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"> igraph_rng_seed(igraph_rng_default(), 42);</span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"><span class="p">@@ -65,12 +66,25 @@</span> int main() {</span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"> igraph_hrg_predict(&karate, &edges, &prob, /* hrg= */ 0, /* start= */ 0,</span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"> /* num_samples= */ 100, /* num_bins= */ 25);</span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- /* Check */</span></span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_print(&edges);</span></span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_print(&prob);</span></span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ /* We do some simple validity tests on the resolts only; the exact results</span></span>
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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ * are different on i386 vs other platforms due to numerical inaccuracies */</span></span>
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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ n = igraph_vector_size(&edges);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < n; i++) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (VECTOR(edges)[i] < 0 || VECTOR(edges)[i] >= igraph_vcount(&karate)) {</span></span>
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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Invalid edges vector:\n");</span></span>
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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_print(&edges);</span></span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return 1;</span></span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ n = igraph_vector_size(&prob);</span></span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for (i = 0; i < n; i++) {</span></span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if (VECTOR(prob)[i] < 0 || VECTOR(prob)[i] > 1) {</span></span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("Invalid prob vector:\n");</span></span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ igraph_vector_print(&prob);</span></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return 2;</span></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"> </span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_destroy(&edges);</span></span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- igraph_vector_destroy(&prob);</span></span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"> igraph_destroy(&karate);</span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"> </span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"> return 0;</span>
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108
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/examples/simple/igraph_hrg3.out</span></span>
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-0.719645 0.683752 0.595454 0.506803 0.485989 0.333764 0.322943 0.296878 0.29381 0.210965 0.195612 0.192923 0.192473 0.187386 0.187317 0.187287 0.187271 0.187263 0.187259 0.187257 0.187251 0.187239 0.187207 0.183749 0.180832 0.180023 0.178898 0.172966 0.17008 0.162812 0.161228 0.146531 0.14168 0.14086 0.140079 0.137672 0.136404 0.13489 0.132525 0.129325 0.129274 0.129251 0.129244 0.127252 0.121633 0.118454 0.115711 0.115706 0.115694 0.115683 0.115682 0.115657 0.115611 0.115604 0.115604 0.114481 0.114458 0.114109 0.114107 0.114102 0.11409 0.114085 0.114064 0.114043 0.114034 0.114031 0.114022 0.114013 0.114007 0.111269 0.110006 0.109708 0.109707 0.109704 0.109694 0.109681 0.109677 0.109661 0.109632 0.109603 0.109603 0.1093 0.106033 0.104809 0.0992668 0.0884375 0.082076 0.0716273 0.0712673 0.0708578 0.0572492 0.0572258 0.0548409 0.0516339 0.0516273 0.0516179 0.050817 0.0504033 0.0484469 0.0476284 0.047237 0.0464392 0.0464134 0.0452337 0.0448152 0.044808 0.0448008 0.0444422 0.0428334 0.042442 0.0420407 0.0412366 0.0404388 0.0388367 0.0388291 0.0388284 0.0384316 0.0384281 0.0384259 0.0380347 0.0376165 0.0372312 0.0368211 0.0364223 0.0360174 0.0356178 0.034807 0.0344143 0.0336229 0.0336045 0.0328007 0.0324309 0.0324261 0.0324191 0.0324163 0.0324147 0.0324068 0.0324002 0.0320294 0.0320259 0.0320247 0.0320217 0.0320193 0.0320179 0.0320174 0.0320164 0.032016 0.0320091 0.0320052 0.0320041 0.0320039 0.032001 0.0316184 0.0316037 0.0312305 0.0312223 0.0312223 0.0312184 0.0312173 0.0312057 0.0312007 0.0308168 0.0304284 0.0304253 0.0304241 0.0304122 0.0304104 0.0304093 0.0300288 0.0300273 0.0300273 0.0300262 0.0300229 0.0300227 0.0300217 0.0300215 0.0300211 0.0300183 0.0300174 0.030015 0.0300104 0.0300071 0.0300064 0.0300057 0.0300038 0.0296276 0.0296275 0.0296268 0.0296253 0.0296244 0.0296235 0.0296223 0.0296217 0.0296214 0.0296169 0.0296166 0.0296164 0.0296156 0.0296156 0.029613 0.0296129 0.0296124 0.029609 0.0296074 0.0296068 0.0296067 0.029601 0.0292285 0.0292281 0.029228 0.029227 0.0292264 0.0292253 0.0292247 0.029224 0.0292234 0.0292214 0.0292206 0.0292204 0.0292199 0.0292194 0.0292193 0.0292185 0.0292177 0.0292175 0.029215 0.0292149 0.0292143 0.0292138 0.0292135 0.0292134 0.0292131 0.0292131 0.0292129 0.0292124 0.0292124 0.0292109 0.0292097 0.0292094 0.0292069 0.0292067 0.0292065 0.0292057 0.0292055 0.0292054 0.029204 0.0292038 0.0292024 0.0288275 0.0288264 0.0288248 0.0288216 0.0288214 0.0288177 0.0288109 0.028428 0.0284278 0.0284269 0.0284265 0.0284252 0.0284206 0.0284198 0.0284189 0.0284187 0.0284185 0.0284165 0.0284155 0.0284155 0.0284151 0.0284146 0.0284142 0.028414 0.0284109 0.0284108 0.0284086 0.0284075 0.0284049 0.0284044 0.0284042 0.028403 0.0284029 0.0284028 0.0284005 0.0280205 0.0280151 0.0280087 0.0276275 0.0276274 0.0276265 0.0276218 0.0276199 0.0276192 0.0276182 0.0276174 0.0276123 0.0276102 0.0276097 0.0276094 0.0276089 0.0276079 0.0276054 0.0276023 0.0272245 0.0272132 0.027208 0.0268207 0.0268192 0.0264199 0.0264097 0.0264007 0.0264001 0.0260233 0.0260197 0.026016 0.0260091 0.0260072 0.0260005 0.0260003 0.0256047 0.0256043 0.0256007 0.0252222 0.025217 0.0252062 0.0252034 0.0252007 0.024803 0.0244133 0.0244056 0.0240202 0.024002 0.0236216 0.0236123 0.023611 0.0236066 0.0232214 0.0232209 0.0232176 0.0232161 0.0232137 0.0232132 0.0232124 0.0232119 0.0232118 0.0232104 0.0232091 0.0232062 0.0232045 0.0232042 0.0228161 0.0228156 0.022807 0.0228039 0.0228029 0.0228021 0.0224223 0.0224216 0.0224215 0.0224211 0.0224203 0.0224197 0.0224191 0.0224184 0.022417 0.0224165 0.0224151 0.0224148 0.0224143 0.0224142 0.0224142 0.0224141 0.0224134 0.0224131 0.0224131 0.0224129 0.0224128 0.0224125 0.0224125 0.0224124 0.0224123 0.0224121 0.0224121 0.0224114 0.022411 0.0224107 0.0224104 0.0224102 0.0224101 0.0224096 0.0224095 0.0224094 0.0224077 0.0224072 0.0224065 0.0224063 0.0224056 0.0224052 0.0224049 0.0224044 0.0224042 0.0224041 0.022404 0.0224037 0.0224036 0.0224034 0.0224032 0.0224031 0.022403 0.0224029 0.0224026 0.0224018 0.0224016 0.0224013 0.0224007 0.0216173 0.0216148 0.0216058 0.0212203 0.0212042 0.0208108 0.0200013 0.0196172 0.0196143 0.0196133 0.019607 0.0196048 0.0196009 0.0192092 0.0192003 0.018008 0.0176086 0.0172075 0.0168134 0.0156149 0.0156131 0.0156029 0.014807 0.0136058 0.0136001 0.0124021 0.0108058 0.0100088 0.010001 0.00960377 0.00960348 0.00960337 0.00800783 0.00800481 0.00800239 0.00760756 0.00760068 0.00720552 0.00720059 0.00680338 0.00680201 0.00680079 0.00640602 0.00640375 0.00640105 0.00640075 0.00640054 0.00600575 0.0060053 0.00600322 0.00600158 0.00520508 0.00520475 0.00520195 0.00520112 0.00480422 0.00480307 0.00480259 0.00480227 0.00480201 0.00480169 0.00480167 0.00480059 0.00480054 0.0048004 0.00480027 0.00480025 0.00400192 0.00360318</span></span>
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="diff"><span class="gh" style="color: #999;">diff --git a/tests/hrg.at b/tests/hrg.at</span></span>
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="diff"><span class="gh" style="color: #999;">index 317fc0c6c..2e33e7bec 100644</span></span>
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/tests/hrg.at</span></span>
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/tests/hrg.at</span></span>
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="diff"><span class="p">@@ -28,10 +28,10 @@</span> AT_CLEANUP</span>
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="diff"> AT_SETUP([Consensus tree (igraph_hrg_consensus) :])</span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="diff"> AT_KEYWORDS([hierarchical random graph consensus tree])</span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-AT_COMPILE_CHECK([simple/igraph_hrg2.c], [simple/igraph_hrg2.out])</span></span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+AT_COMPILE_CHECK([simple/igraph_hrg2.c])</span></span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="diff"> AT_CLEANUP</span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="diff"> </span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="diff"> AT_SETUP([Missing edge prediction (igraph_hrg_predict) :])</span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="diff"> AT_KEYWORDS([hierarchical random graph missing edge prediction])</span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-AT_COMPILE_CHECK([simple/igraph_hrg3.c], [simple/igraph_hrg3.out])</span></span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+AT_COMPILE_CHECK([simple/igraph_hrg3.c])</span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="diff"> AT_CLEANUP</span></pre>
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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<a href="https://salsa.debian.org/med-team/igraph/-/compare/544120c3f5513100bc5049596df55032c55d9944...8a4f570b5ef89ebb97a7cef7a0fcf142c7ca6bbd#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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1
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">skip_tests_accessing_remote.patch</span>
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2
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">soversion.patch</span>
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3
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">enable_removing_third_party_code.patch</span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">01-fix-adjacency-spectral-embedding.patch</span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">02-fix-scg2-test-case.patch</span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">03-fix-igraph-i-gml-tostring-static-var.patch</span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">04-fix-igraph-layout-merge2-test-case.patch</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">05-canonical-scg-grouping.patch</span>
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9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">06-canonical-scg-eigenvectors.patch</span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">07-canonical-infomap.patch</span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">08-infomap-test-relaxation.patch</span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">09-hrg-test-relaxation.patch</span></pre>
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