<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">

<h3>
Michael R. Crusoe pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/mmseqs2">Debian Med / mmseqs2</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/ff43c5381929fa8716e5b7ceeb1e8ee4dcbee375">ff43c538</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-04-23T18:23:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 11-e1a1c+ds</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#24139dae656713ba861751fb2c2ac38839349a7a">
.gitattributes
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#40ebc6823f24f296c0cd3fddd6ccda69b74ff2e4">
azure-pipelines.yml
</a>
</li>
<li class="file-stats">
<a href="#7e39d90c64d999c07a20d0cb8f71080492008271">
cmake/FindASan.cmake
</a>
</li>
<li class="file-stats">
<a href="#5227305aa0e6d963f80d6b371230de5de8c2fb1f">
cmake/MMseqsResourceCompiler.cmake
</a>
</li>
<li class="file-stats">
<a href="#cd7a138d645092f46d3911b0671cd6d1543156d3">
cmake/MMseqsSetupDerivedTarget.cmake
</a>
</li>
<li class="file-stats">
<a href="#c65149413b79fe3a8bf30f54ec6eae2276690583">
data/CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#b0856d03cbccd90e97b5d5a796777c4293f8f054">
<span class="new-file">
+
data/resources/CMakeLists.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#db0003c74480c24394cc9f6033312c4e95d98572">
data/CovSeqidQscPercMinDiag.lib

data/resources/CovSeqidQscPercMinDiag.lib
</a>
</li>
<li class="file-stats">
<a href="#64724b1ce011c5405493d0dacb2488223bf3077d">
data/CovSeqidQscPercMinDiagTargetCov.lib

data/resources/CovSeqidQscPercMinDiagTargetCov.lib
</a>
</li>
<li class="file-stats">
<a href="#3b4ee142874c9f999f024912f881adb3f9fcae41">
data/ExpOpt3_8_polished.cs32.lib

data/resources/ExpOpt3_8_polished.cs32.lib
</a>
</li>
<li class="file-stats">
<a href="#3775e1ba98b10f3b56ca81dad9645204cd520548">
data/Library255_may17.lib

data/resources/Library255_may17.lib
</a>
</li>
<li class="file-stats">
<a href="#149aed0a925c49b86e20aa615bf878bc39d50026">
data/cs219.lib

data/resources/cs219.lib
</a>
</li>
<li class="file-stats">
<a href="#e34a478eaea801bd0aa18f642052de12508cef30">
<span class="new-file">
+
data/resources/krona_prelude.html
</span>
</a>
</li>
<li class="file-stats">
<a href="#552ffa678e5358ebb7e55737c8a4a7f2bb09789f">
data/libPolished_8.lib

data/resources/libPolished_8.lib
</a>
</li>
<li class="file-stats">
<a href="#9ef738250cf448f523f40e3d1c66c7f471ff2c19">
data/libPure_blosum62_255.lib

data/resources/libPure_blosum62_255.lib
</a>
</li>
<li class="file-stats">
<a href="#a64a5f4301adc2e47ec7b8181fb2563e174759fd">
data/libPure_blosum62_32.lib

data/resources/libPure_blosum62_32.lib
</a>
</li>
<li class="file-stats">
<a href="#7b9f25bad0c852ab260ad73af97d5e04187add40">
<span class="deleted-file">

data/summarizeresultsbyset.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#76d6f3ad7664848dec6db0ac2b890d046101fb08">
<span class="new-file">
+
data/workflow/CMakeLists.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#6a221667b67de23b816bb048bae158e676981ae9">
data/blastn.sh

data/workflow/blastn.sh
</a>
</li>
<li class="file-stats">
<a href="#9ae988dc7a7741929b28a9854552f334defa34f3">
data/blastp.sh

data/workflow/blastp.sh
</a>
</li>
<li class="file-stats">
<a href="#d74628ddde2e570a283b47e37c105120dcd0cd47">
data/blastpgp.sh

data/workflow/blastpgp.sh
</a>
</li>
<li class="file-stats">
<a href="#f66e2e30cf1cf74b19a2b504842382524645bc78">
data/cascaded_clustering.sh

data/workflow/cascaded_clustering.sh
</a>
</li>
<li class="file-stats">
<a href="#38ff34e4970609edda33a0f457e3c040165dc982">
data/clustering.sh

data/workflow/clustering.sh
</a>
</li>
<li class="file-stats">
<a href="#20ce4570f583524fa5d06e393c162e87efa10667">
data/createindex.sh

data/workflow/createindex.sh
</a>
</li>
<li class="file-stats">
<a href="#c647220105af487350547c4b6b68bbe6e0228aa1">
data/createtaxdb.sh

data/workflow/createtaxdb.sh
</a>
</li>
<li class="file-stats">
<a href="#d3d522ac4a50917a3fea4e907c92ee38427773cb">
<span class="new-file">
+
data/workflow/databases.sh
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">

<br>
<a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/ff43c5381929fa8716e5b7ceeb1e8ee4dcbee375">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/mmseqs2/-/commit/ff43c5381929fa8716e5b7ceeb1e8ee4dcbee375"}}</script>


</p>
</div>
</body>
</html>