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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/13c9c6006ae253c8d387fb545c45abff2a7d0cba">13c9c600</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-24T13:45:08+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/13c9c6006ae253c8d387fb545c45abff2a7d0cba#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 24 Apr 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 24 Apr 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 172 | {<span class="idiff left right">covid-19,imaging</span>} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">3 | {practice,covid-19</span>,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">2</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 37 | {<span class="idiff left right">practice,laboratory,imaging,his,covid-19,oncology</span>} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> dicom3tools | 3<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> dicomscope | 3<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 172 | {<span class="idiff left right">imaging,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">1 | {covid-19,practice</span>,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">4</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 37 | {<span class="idiff left right">imaging,practice,laboratory,oncology,his,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> dicom3tools | 3<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> dicomscope | 3<span class="idiff left right">2</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> amide | 31 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> <span class="idiff left right">dcm2niix | 31 | {imaging} </span> | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> <span class="idiff left right">gdcm | 31 | {imaging,covid-19}</span> | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">5</span> | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gnumed-server | <span class="idiff left right">20</span> | {practice,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> openslide | <span class="idiff left right">20</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> minc-tools | 1<span class="idiff left right">9</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> pixelmed | 1<span class="idiff left right">9</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> king | 1<span class="idiff left right">8</span> | {typesetting,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> <span class="idiff left right">gdcm | 30 | {covid-19,imaging}</span> | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> <span class="idiff left right">dcm2niix | 29 | {imaging} </span> | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">6</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> gnumed-server | <span class="idiff left right">19</span> | {practice,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> openslide | <span class="idiff left right">19</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> minc-tools | 1<span class="idiff left right">8</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> pixelmed | 1<span class="idiff left right">8</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> king | 1<span class="idiff left right">7</span> | {typesetting,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> ngs-sdk | 17 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> <span class="idiff left right">plastimatch | 17 | {imaging}</span> | </span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> <span class="idiff left right">hunspell-en-med | 16 | {tools} </span> | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> invesalius | 16 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">biosig4c++ | 15 | {imaging,physics}</span> | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right">hunspell-en-med | 15 | {tools} </span> | </span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> mia | 1<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> vtk-dicom | 1<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> adun.app | 1<span class="idiff left right">4</span> | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">plastimatch | 16 | {imaging} </span> | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right">biosig4c++ | 14 | {imaging,physics}</span> | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> mia | 1<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> vtk-dicom | 1<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> adun.app | 1<span class="idiff left right">3</span> | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> gasic | 11 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> gdcm | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> obitools | 11 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> jebl2 | 10 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> ea-utils | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> insighttoolkit4 | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> mipe | 9 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> ncbi-entrez-direct | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> parsnp | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> staden | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> tree-puzzle | 9 | {bio,cloud,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> biojava-live | 8 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> ea-utils | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> fitgcp | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> jaligner | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> librg-utils-perl | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> ampliconnoise | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> staden | 8 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> ampliconnoise | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> cgview | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> fastlink | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> jaligner | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> king-probe | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> neobio | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> paml | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext"> salmon | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> alter-sequence-alignment | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> arden | 6 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> biomaj3-cli | 6 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> bppsuite | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> cgview | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> cluster3 | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> codonw | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> dazzdb | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> delly | 6 | {covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> diamond-aligner | 6 | {bio,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"> diamond-aligner | 6 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> ecopcr | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> edtsurf | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext"> embassy-domainatrix | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> embassy-domainatrix | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> freebayes | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="plaintext"> freecontact | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> freecontact | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> indelible | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> king-probe | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> libminc | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> libncl | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="plaintext"> melting | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> melting | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> mrs | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> ncbi-seg | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> neobio | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> norsp | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> phast | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> piler | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> prime-phylo | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> pymia | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> rambo-k | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> salmon | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> seer | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"> seqsero | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> sibsim4 | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="plaintext"> sigma-align | 6 | {<span class="idiff left right">bio-phylogeny,cloud</span>,bio} | </span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> spread-phy | 6 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> sibsim4 | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="plaintext"> sigma-align | 6 | {<span class="idiff left right">cloud,bio-phylogeny</span>,bio} | </span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> spread-phy | 6 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> anfo | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> bandage | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> beads | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> biomaj3-daemon | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> bio-rainbow | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> bio-tradis | 5 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="plaintext"> bio-tradis | 5 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="plaintext"> bitseq | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> centrifuge | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> clonalorigin | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> daligner | 5 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> delly | 5 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> embassy-domalign | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext"> embassy-domsearch | 5 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="plaintext"> embassy-domsearch | 5 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> gatb-core | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> harvest-tools | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> jellyfish1 | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> lagan | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="plaintext"> libminc | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> mapsembler2 | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> maqview | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> mencal | 5 | {tools} | </span>
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> mhap | 5 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> microbegps | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext"> orthanc-webviewer | 5 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="plaintext"> paraclu | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="plaintext"> paraclu | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> phybin | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext"> phyutility | 5 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext"> phyutility | 5 | {<span class="idiff left right">cloud,bio</span>} | </span>
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106
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> placnet | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> predictprotein | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext"> probabel | 5 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext"> probabel | 5 | {<span class="idiff left right">cloud,bio</span>} | </span>
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109
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> pscan-tfbs | 5 | {bio} | </span>
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110
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> psychopy | 5 | {psychology} | </span>
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111
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> radiant | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -119,12 +119,13 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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119
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> transrate-tools | 5 | {bio} | </span>
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120
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> transtermhp | 5 | {bio} | </span>
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121
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> treeview | 5 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext"> zalign | 5 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext"> abacas | 4 | {<span class="idiff left right">bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="plaintext"> zalign | 5 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext"> abacas | 4 | {<span class="idiff left right">covid-19,bio}</span> | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> assemblytics | 4 | {bio} | </span>
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125
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> baitfisher | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="plaintext"> bart-view | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="plaintext"> beast-mcmc | 4 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="plaintext"> brig | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> clonalframeml | 4 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> dascrubber | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> dicompyler | 4 | {oncology} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -141,12 +142,12 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> libsbml | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> libsmithwaterman | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> mauve-aligner | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext"> mhap | 4 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> murasaki | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext"> perm | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext"> orthanc-webviewer | 4 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="plaintext"> perm | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC148" class="line" lang="plaintext"> poretools | 4 | {bio} | </span>
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149
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> proalign | 4 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext"> prottest | 4 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext"> prottest | 4 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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151
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="plaintext"> pscan-chip | 4 | {bio} | </span>
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152
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> rdp-classifier | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> relion | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -156,10 +157,9 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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157
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="plaintext"> soapsnp | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="plaintext"> sprai | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="plaintext"> stacks | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="plaintext"> tnseq-transit | 4 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="plaintext"> tnseq-transit | 4 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC161" class="line" lang="plaintext"> tracetuner | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> biosig4c++ | 3 | {imaging-dev,physics} | </span>
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> brig | 3 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext"> biosig4c++ | 3 | {physics,imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC163" class="line" lang="plaintext"> canu | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC164" class="line" lang="plaintext"> elph | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC165" class="line" lang="plaintext"> ghmm | 3 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -174,7 +174,7 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> mptp | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="plaintext"> nutsqlite | 3 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> openslide | 3 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC177" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">imaging,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">covid-19,imaging</span>} | </span>
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="plaintext"> orthanc-mysql | 3 | {imaging} | </span>
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179
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<pre style="margin: 0;"> <span id="LC179" class="line" lang="plaintext"> patman | 3 | {bio} | </span>
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180
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="plaintext"> pilon | 3 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -213,11 +213,11 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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213
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="plaintext"> stringtie | 2 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="plaintext"> sweed | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="plaintext"> tvc | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> varscan | 2 | {<span class="idiff left right">bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="plaintext"> varscan | 2 | {<span class="idiff left right">covid-19,bio}</span> | </span>
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<pre style="margin: 0;"> <span id="LC217" class="line" lang="plaintext"> velvetoptimiser | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="plaintext"> biobambam2 | 1 | {<span class="idiff left right">covid-19,bio-dev</span>,bio} | </span>
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext"> blasr | 1 | {bio<span class="idiff left right">,bio-ngs</span>} | </span>
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="plaintext"> biobambam2 | 1 | {<span class="idiff left right">bio-dev,covid-19</span>,bio} | </span>
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="plaintext"> blasr | 1 | {bio<span class="idiff left right">-ngs,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC221" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> embassy-phylip | 1 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> emboss-explorer | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -228,12 +228,12 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC228" class="line" lang="plaintext"> libxdf | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC229" class="line" lang="plaintext"> opensurgsim | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC230" class="line" lang="plaintext"> orthanc-postgresql | 1 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="plaintext"> oscar | 1 | {<span class="idiff left right">tools,practice,data</span>} | </span>
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="plaintext"> oscar | 1 | {<span class="idiff left right">data,practice,tools</span>} | </span>
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<pre style="margin: 0;"> <span id="LC232" class="line" lang="plaintext"> papyrus | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> pbdagcon | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> pilercr | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> plasmidseeker | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext"> python-py2bit | 1 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext"> python-py2bit | 1 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> python-scitrack | 1 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> relion | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> samtools-legacy | 1 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -242,9 +242,9 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC242" class="line" lang="plaintext"> simpleitk | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="plaintext"> spaln | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="plaintext"> trace2dbest | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext"> tree-puzzle | 1 | {<span class="idiff left right">bio-phylogeny,cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="plaintext"> tree-puzzle | 1 | {<span class="idiff left right">cloud,bio,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;"> <span id="LC246" class="line" lang="plaintext"> volpack | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext"> acedb | 0 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="plaintext"> acedb | 0 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="plaintext"> augur | 0 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="plaintext"> bambamc | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="plaintext"> bbmap | 0 | {covid-19} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -289,7 +289,7 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC289" class="line" lang="plaintext"> miaviewit | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC290" class="line" lang="plaintext"> milib | 0 | {bio-dev,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="plaintext"> mssstest | 0 | {tools} | </span>
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="plaintext"> multiqc | 0 | {bio<span class="idiff left right">} </span> | </span>
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="plaintext"> multiqc | 0 | {bio<span class="idiff left right">,covid-19}</span> | </span>
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="plaintext"> murasaki | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="plaintext"> ncbi-vdb | 0 | {bio-dev} | </span>
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295
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="plaintext"> opencfu | 0 | {laboratory} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -302,9 +302,9 @@ Last-Update: Fri, 24 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="plaintext"> sbmltoolbox | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="plaintext"> seq-gen | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC304" class="line" lang="plaintext"> skewer | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC305" class="line" lang="plaintext"> smrtanalysis | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC305" class="line" lang="plaintext"> smrtanalysis | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="plaintext"> solvate | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="plaintext"> thesias | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="plaintext"> thesias | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="plaintext"> trim-galore | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="plaintext"> vtk-dicom | 0 | {imaging-dev} | </span>
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