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GitLab

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<h3>

Andreas Tille pushed to branch master

at <a href="https://salsa.debian.org/med-team/python-nanoget">Debian Med / python-nanoget</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/3226e4e8b5939ce4433e7d92b7aaba0471681c21">3226e4e8</a></strong>

<div>

<span>by Andreas Tille</span>

<i>at 2020-04-24T17:34:41+02:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adjust Build-Depends

</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/af8488974d0488df82f007be0e099474d8c531b7">af848897</a></strong>

<div>

<span>by Andreas Tille</span>

<i>at 2020-04-25T08:32:24+02:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add example data and autopkgtest

</pre>

</li>

</ul>

<h4>12 changed files:</h4>

<ul>

<li class="file-stats">

<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

debian/control

</a>

</li>

<li class="file-stats">

<a href="#68b65259b14687a11c4cb3bc742a8c1db2b401d0">

<span class="new-file">

+

debian/missing-source/nanotest/README.md

</span>

</a>

</li>

<li class="file-stats">

<a href="#8b53403eb490d10842cb0dc080199d10f62ebf21">

<span class="new-file">

+

debian/missing-source/nanotest/alignment.bam

</span>

</a>

</li>

<li class="file-stats">

<a href="#5da260db09f46c2e822f9c9e9307d9d07b9e37fb">

<span class="new-file">

+

debian/missing-source/nanotest/alignment.bam.bai_orig

</span>

</a>

</li>

<li class="file-stats">

<a href="#afc3c284561e1dacf61c3edb144642c0c80cf89d">

<span class="new-file">

+

debian/missing-source/nanotest/reads.fa.gz

</span>

</a>

</li>

<li class="file-stats">

<a href="#771daeba8f9e78956c6baa3fe86b003f3cd03055">

<span class="new-file">

+

debian/missing-source/nanotest/reads.fastq.gz

</span>

</a>

</li>

<li class="file-stats">

<a href="#17196449545dbe68590996b39bfabe795d34b04a">

<span class="new-file">

+

debian/missing-source/nanotest/sequencing_summary.txt

</span>

</a>

</li>

<li class="file-stats">

<a href="#4576f2477f20d8168b8e45dc0b67ad6b5f437a90">

<span class="new-file">

+

debian/python3-nanoget-examples.install

</span>

</a>

</li>

<li class="file-stats">

<a href="#a845fd45d1f15299e50b928f83edfb28d37b2a04">

<span class="new-file">

+

debian/python3-nanoget.install

</span>

</a>

</li>

<li class="file-stats">

<a href="#8756c63497c8dc39f7773438edf53b220c773f67">

debian/rules

</a>

</li>

<li class="file-stats">

<a href="#d0b2adb0358f0eab7dd3bb1849dd4e795a81f242">

<span class="new-file">

+

debian/source/include-binaries

</span>

</a>

</li>

<li class="file-stats">

<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">

debian/tests/run-unit-test

</a>

</li>

</ul>

<h4>Changes:</h4>

<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

<tr class="line_holder match" id="" style="line-height: 1.6;">

<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,6 +7,9 @@ Build-Depends: debhelper-compat (= 12),</td>

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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">               dh-python,</span>

</pre>

</td>

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<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">               python3,</span>

</pre>

</td>

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<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

</td>

<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">               python3-setuptools,</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

10

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">               python3-biopython,</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

11

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">               python3-nanomath,</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

12

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">               python3-pysam</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

10

</td>

<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

13

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">Standards-Version: 4.5.0</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

11

</td>

<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

14

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/python-nanoget</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

12

</td>

<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

15

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/python-nanoget.git</span>

</pre>

</td>

</tr>

<tr class="line_holder match" id="" style="line-height: 1.6;">

<td class="diff-line-num unfold js-unfold old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,8 +20,6 @@ Architecture: all</td>

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<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

17

</td>

<td class="diff-line-num new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

20

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Section: python</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

18

</td>

<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

21

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Depends: ${python3:Depends},</span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

19

</td>

<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

22

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">         ${misc:Depends},</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

20

</td>

<td class="diff-line-num new_line old" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext">         python3-pandas,</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

21

</td>

<td class="diff-line-num new_line old" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">         python3-numpy,</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

22

</td>

<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

23

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">         python3-biopython,</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

23

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">         python3-pysam,</span>

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">         python3-nanomath</span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -39,3 +40,28 @@ Description: extract information from Oxford Nanopore sequencing data and alignm</td>

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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> returned as a pandas DataFrame with standardized headernames for</span>

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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> convenient extraction. The functions perform logging while being called</span>

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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> and extracting data.</span>

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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"></span>

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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext">Package: python3-nanoget-examples</span>

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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext">Architecture: all</span>

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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext">Section: python</span>

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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext">Depends: ${misc:Depends},</span>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext">Enhances: python3-nanoget</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext">Description: example data for python3-nanoget (dealing with Oxford Nanopore data)</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> The Python3 module nanoget provides functions to extract useful metrics</span>

</pre>

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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> from Oxford Nanopore sequencing reads and alignments.</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> .</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> Data can be presented in the following formats, using the following functions:</span>

</pre>

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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> .</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext">  * sorted bam file process_bam(bamfile, threads)</span>

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<td class="diff-line-num new new_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext">  * standard fastq file process_fastq_plain(fastqfile, 'threads')</span>

</pre>

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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext">  * fastq file with metadata from MinKNOW or Albacore</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext">    process_fastq_rich(fastqfile)</span>

</pre>

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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext">  * sequencing_summary file generated by Albacore</span>

</pre>

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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext">    process_summary(sequencing_summary.txt, 'readtype')</span>

</pre>

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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> .</span>

</pre>

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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> Fastq files can be compressed using gzip, bzip2 or bgzip. The data is</span>

</pre>

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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> returned as a pandas DataFrame with standardized headernames for</span>

</pre>

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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> convenient extraction. The functions perform logging while being called</span>

</pre>

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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> and extracting data.</span>

</pre>

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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"> .</span>

</pre>

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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext"> This package just contains an example script and the data to run the example.</span></pre>

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<li id="68b65259b14687a11c4cb3bc742a8c1db2b401d0">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#68b65259b14687a11c4cb3bc742a8c1db2b401d0"><strong>debian/missing-source/nanotest/README.md</strong></a>

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="markdown"><span class="gh" style="color: #999;"># nanotest</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC2" class="line" lang="markdown">Small test datasets for testing nanopack scripts and modules</span>

</pre>

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="markdown"></span>

</pre>

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<pre style="margin: 0;">+<span id="LC4" class="line" lang="markdown">This repo contains:</span>

</pre>

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<pre style="margin: 0;">+<span id="LC5" class="line" lang="markdown"><span class="p">-</span> 371 reads from <span class="p">[</span><span class="nv" style="color: #008080;">ultra long e.coli reads from Josh Quick</span><span class="p">](</span><span class="sx" style="color: #d14;">http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC6" class="line" lang="markdown"><span class="p">-</span> an alignment in bam format of 1000 reads from <span class="p">[</span><span class="nv" style="color: #008080;">SRR5665597</span><span class="p">](</span><span class="sx" style="color: #d14;">http://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000132</span><span class="p">)</span> to the reference genome (using minimap2)</span>

</pre>

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<pre style="margin: 0;">+<span id="LC7" class="line" lang="markdown"><span class="p">-</span> an alignment in cram format of 1000 reads from <span class="p">[</span><span class="nv" style="color: #008080;">SRR5665597</span><span class="p">](</span><span class="sx" style="color: #d14;">http://mgen.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000132</span><span class="p">)</span> to the reference genome (using minimap2)</span>

</pre>

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8

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<pre style="margin: 0;">+<span id="LC8" class="line" lang="markdown"><span class="p">-</span> an albacore summary file of 371 the reads from the fastq file</span>

</pre>

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="markdown"><span class="p">-</span> a pickle file of a pandas DataFrame created after feature extraction using <span class="p">[</span><span class="nv" style="color: #008080;">nanoget</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/wdecoster/nanoget</span><span class="p">)</span> from the summary file</span>

</pre>

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="markdown"><span class="p">-</span> a pickle file of a pandas DataFrame created after feature extraction using <span class="p">[</span><span class="nv" style="color: #008080;">nanoget</span><span class="p">](</span><span class="sx" style="color: #d14;">https://github.com/wdecoster/nanoget</span><span class="p">)</span> from the bam file</span></pre>

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</li>

<li id="8b53403eb490d10842cb0dc080199d10f62ebf21">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#8b53403eb490d10842cb0dc080199d10f62ebf21"><strong>debian/missing-source/nanotest/alignment.bam</strong></a>

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</li>

<li id="5da260db09f46c2e822f9c9e9307d9d07b9e37fb">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#5da260db09f46c2e822f9c9e9307d9d07b9e37fb"><strong>debian/missing-source/nanotest/alignment.bam.bai_orig</strong></a>

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<li id="afc3c284561e1dacf61c3edb144642c0c80cf89d">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#afc3c284561e1dacf61c3edb144642c0c80cf89d"><strong>debian/missing-source/nanotest/reads.fa.gz</strong></a>

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<li id="771daeba8f9e78956c6baa3fe86b003f3cd03055">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#771daeba8f9e78956c6baa3fe86b003f3cd03055"><strong>debian/missing-source/nanotest/reads.fastq.gz</strong></a>

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<li id="17196449545dbe68590996b39bfabe795d34b04a">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#17196449545dbe68590996b39bfabe795d34b04a"><strong>debian/missing-source/nanotest/sequencing_summary.txt</strong></a>

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1

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">filename      read_id run_id  channel start_time      duration        num_events      passes_filtering        template_start  num_events_template     template_duration       num_called_template     sequence_length_template        mean_qscore_template    strand_score_template</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

2

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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read148_strand.fast5 170fb1c5-979b-4df7-864f-c5c14689a14c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     3733.02575      22.56375        12875   True    0.031   12875   22.53275        12875   8242    10.049  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

3

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch320_read27_strand.fast5  6d0956c2-c161-48f4-b2fa-142ca872406f    b5e83402e47ea9927694cb6e80d61180dfc8a49a        320     1826.8425       123.37625       34771   True    62.52675        34771   60.8495 34771   16881   11.164  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch496_read2_strand.fast5   e9a32f7d-4aa6-4b85-9f76-6764769ad99c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        496     7.1315  121.414 52102   True    30.235  52102   91.179  52102   19346   9.822   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

5

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch485_read15_strand.fast5  b01da059-de21-4ed3-9eb8-6126ea59cb00    b5e83402e47ea9927694cb6e80d61180dfc8a49a        485     2586.54825      107.53375       36399   True    43.834  36399   63.69975        36399   19861   10.17   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

6

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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch362_read219_strand.fast5 4d253e4f-2090-4adb-aa3e-16dc5e4d5e55    b5e83402e47ea9927694cb6e80d61180dfc8a49a        362     2720.77225      14.9615 2577    True    10.45175        2577    4.50975 2577    1672    12.663  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

7

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch163_read69_strand.fast5  4629b40a-aea4-4c92-9458-0e66ef4ecc17    b5e83402e47ea9927694cb6e80d61180dfc8a49a        163     673.69725       185.45225       95287   True    18.699  95287   166.75325       95287   59133   9.573   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

8

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch502_read25_strand.fast5  a8785b36-b442-4de7-9e43-5ddae6e39fdb    b5e83402e47ea9927694cb6e80d61180dfc8a49a        502     884.39875       187.91175       83750   True    41.3485 83750   146.56325       83750   55323   11.985  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

9

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read19_strand.fast5  436405ef-1e7d-43a5-99b4-929e31897043    b5e83402e47ea9927694cb6e80d61180dfc8a49a        355     571.15325       94.5895 11586   True    74.31375        11586   20.27575        11586   7636    11.865  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

10

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch240_read291_strand.fast5        f31d3457-2065-4acf-a9d5-966a4818564c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        240     3511.1415       57.23625        19778   True    22.62325        19778   34.613  19778   6176    8.535   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

11

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read242_strand.fast5        d67b506a-b026-450d-803e-1e12bd1facaa    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     6315.02775      53.26525        8709    True    38.023  8709    15.24225        8709    5765    12.3    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

12

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch217_read62_strand.fast5 68a01ec4-bf8f-4aa4-8763-39cd9a15b8aa    b5e83402e47ea9927694cb6e80d61180dfc8a49a        217     3506.43875      16.38525        2944    True    11.23225        2944    5.153   2944    2011    9.229   -0.0007</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

13

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch321_read18_strand.fast5 63fcec17-46fd-4cdc-a381-7b09d6f652e9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        321     820.995 47.1295 25668   True    2.21    25668   44.9195 25668   17575   12.18   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

14

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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch235_read49_strand.fast5 45eb23a8-63d1-4870-9a31-c349836cc728    b5e83402e47ea9927694cb6e80d61180dfc8a49a        235     3662.59625      250.6945        122186  True    36.86825        122186  213.82625       122186  20295   8.707   -0.0003</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

15

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch150_read334_strand.fast5        1b05de41-d66d-4947-8533-c27bdafeee69    b5e83402e47ea9927694cb6e80d61180dfc8a49a        150     4017.1535       183.56  97579   True    12.79625        97579   170.76375       97579   61111   9.709   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

16

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch5_read33_strand.fast5 b5b5833b-9341-4886-9ffd-7dd7f876c009    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        5       142.765 25.96625        9812    True    8.79475 9812    17.1715 9812    225     7.694   -0.0002</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

17

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch438_read26_strand.fast5       76a5b578-7c92-458b-9981-437f48b82455    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        438     160.71825       55.85775        31896   True    0.03975 31896   55.818  31896   21845   10.004  -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

18

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch450_read2842_strand.fast5     26cfa987-1a6d-4137-b4b7-19f84f990bfc    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        450     362.60825       76.74075        43851   True    0.0     43851   76.74075        43851   29248   10.348  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

19

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch151_read88_strand.fast5       6e2f5cdb-c978-4403-9611-4faaa35722f8    a3f8b1fb56e77905d115a86ef283e1f838d7476d        151     184.193 8.241   4709    True    0.0     4709    8.241   4709    2638    10.235  -0.0004</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

20

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch402_read37_strand.fast5       32762878-4ef4-4f27-bfcd-5fe902fb6497    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        402     250.694 77.26225        25086   True    33.3605 25086   43.90175        25086   16574   11.969  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

21

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch206_read39_strand.fast5       d52c84b1-7a31-4639-b41e-cf5847681395    a3f8b1fb56e77905d115a86ef283e1f838d7476d        206     164.9445        36.5865 20906   True    0.0     20906   36.5865 20906   10700   7.348   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

22

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch174_read239_strand.fast5      c61d655a-fa49-4376-a266-d1710fffdc60    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        174     140.031 20.596  11726   True    0.07425 11726   20.52175        11726   5285    7.139   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

23

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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch240_read28_strand.fast5       e32e01c1-79ad-4436-96a6-afb4414bccab    a3f8b1fb56e77905d115a86ef283e1f838d7476d        240     96.7155 34.78475        3500    True    28.65875        3500    6.126   3500    2284    11.446  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch461_read3_strand.fast5        d7c4f400-faf1-4574-933c-14cfe563ecdb    a3f8b1fb56e77905d115a86ef283e1f838d7476d        461     22.223  40.1695 1803    True    37.0135 1803    3.156   1803    1216    11.478  -0.0006</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch142_read28_strand.fast5       0a779938-c2f0-4fe9-937b-19b8172322b3    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        142     152.8475        63.728  36416   True    0.0     36416   63.728  36416   22419   10.38   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch220_read62_strand.fast5       53d223e3-8341-4fb2-82a9-534b29d917f0    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        220     250.694 22.03525        10606   True    3.47325 10606   18.562  10606   7053    12.447  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch17_read37_strand.fast5        6cd9b908-7d7c-4df2-887b-557631f4ecc4    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        17      320.315 7.64125 4343    True    0.04025 4343    7.601   4343    1726    10.341  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch119_read68_strand.fast5       c1050d07-d676-4f09-bb50-5af9a0d36719    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        119     274.408 2.05275 1157    True    0.02775 1157    2.025   1157    804     11.135  -0.0024</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch260_read26_strand.fast5       e681ea0c-485a-4170-bb87-13e86878f0d5    a3f8b1fb56e77905d115a86ef283e1f838d7476d        260     280.141 2.97125 1281    True    0.728   1281    2.24325 1281    750     7.439   -0.0013</span>

</pre>

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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch427_read24_strand.fast5       e4208eb0-c817-4512-a0d6-3472748d09a3    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        427     125.59  12.975  7397    True    0.02925 7397    12.94575        7397    4747    12.276  -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch507_read3_strand.fast5        cd6e4550-22d9-49e5-8d4a-dc2d54eb78b9    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        507     22.127  64.9935 23188   True    24.41425        23188   40.57925        23188   5082    10.188  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch144_read32_strand.fast5       1ba73b61-7f74-46ce-acbe-643b8946ee07    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        144     147.0335        4.7515  2698    True    0.0285  2698    4.723   2698    1895    10.679  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch222_read21_strand.fast5       a045f9b2-93dd-467f-a7d9-ceb6d72a4f67    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        222     130.9055        1.071   612     True    0.0     612     1.071   612     392     7.268   -0.0036</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch363_read164_strand.fast5      49e5d9e0-b87d-4bb2-867b-fbc6a321bcf8    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        363     431.1165        8.23225 4674    True    0.05125 4674    8.181   4674    3212    11.092  -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch170_read40_strand.fast5       7d15ba0b-67c8-4307-961e-5ddeb79b1056    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        170     232.9605        17.50725        9980    True    0.0415  9980    17.46575        9980    5658    10.647  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch410_read30_strand.fast5       a7fc1f72-648d-471e-87f9-e2186b246627    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        410     141.0205        5.52325 3140    True    0.02725 3140    5.496   3140    1913    11.971  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch349_read69_strand.fast5       17df9262-7bf6-4711-bc7d-a0569f473cd3    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        349     307.5495        20.40675        11647   True    0.02425 11647   20.3825 11647   7829    12.098  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch10_read65_strand.fast5        1bc8d128-eed3-41c2-baea-3ca8cd9f0dc9    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        10      250.694 35.269  9451    True    18.72825        9451    16.54075        9451    6468    10.704  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch67_read26_strand.fast5        09437fae-3ba4-40cd-b02a-40b67a067ffe    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        67      127.99425       10.7565 6059    True    0.15325 6059    10.60325        6059    4117    9.926   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch234_read31_strand.fast5       30a2e325-06d5-4c30-843c-153da097c13b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        234     129.3055        9.26275 5270    True    0.04    5270    9.22275 5270    3704    11.268  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch237_read27_strand.fast5       740be0f7-60f5-4fc5-96d9-225eda8ff83e    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        237     250.6935        35.98925        15850   True    8.251   15850   27.73825        15850   10192   11.631  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch464_read31_strand.fast5       b298c02b-4e8e-4636-b7d2-4920b7e8c292    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        464     157.44275       12.122  6913    True    0.02375 6913    12.09825        6913    4148    10.846  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch192_read3_strand.fast5        7dd06578-5b15-4485-988f-b039a2d86ead    a3f8b1fb56e77905d115a86ef283e1f838d7476d        192     22.223  40.16925        21038   True    3.35275 21038   36.8165 21038   8534    8.957   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch507_read7_strand.fast5        94b3ba2e-2cc3-4a7c-a319-9b1bf976aeff    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        507     98.27225        5.3885  3073    True    0.01025 3073    5.37825 3073    1819    10.48   -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch170_read42_strand.fast5       3eec21b1-872f-480b-8d11-daa41209338b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        170     250.694 77.2625 44150   True    0.0     44150   77.2625 44150   24787   11.046  -0.0002</span>

</pre>

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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch212_read68_strand.fast5       778f7330-179c-42f3-bdfe-f7c5ccddea01    a3f8b1fb56e77905d115a86ef283e1f838d7476d        212     164.93525       36.59575        20911   True    0.0     20911   36.59575        20911   14734   11.492  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch406_read32_strand.fast5       1592d38b-2bec-4892-8021-1a51507c6327    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        406     250.69425       77.26175        35190   True    15.6785 35190   61.58325        35190   19989   8.682   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch226_read66_strand.fast5       5f428477-799c-443a-986f-2ebd5b84ab18    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        226     351.44525       10.95275        6253    True    0.00925 6253    10.9435 6253    3877    11.287  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read39_strand.fast5       890ec449-f329-40c8-9e57-f4eb2c358b4c    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        275     250.69425       8.092   4624    True    0.0     4624    8.092   4624    3122    12.351  -0.0005</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch466_read71_strand.fast5       db1765d2-0daa-4154-9a6d-6aed0cb13803    a3f8b1fb56e77905d115a86ef283e1f838d7476d        466     217.31975       17.3305 7267    True    4.6125  7267    12.718  7267    4838    11.926  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch212_read32_strand.fast5       56ab6b26-7b8f-4447-93b8-331d2dea9a99    a3f8b1fb56e77905d115a86ef283e1f838d7476d        212     94.6505 1.855   1048    True    0.02075 1048    1.83425 1048    759     12.249  -0.0014</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch39_read42_strand.fast5        c5fac5cc-6617-4198-baaa-b5ed9d66d47a    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        39      122.2395        16.3085 9274    True    0.07825 9274    16.23025        9274    6217    10.86   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch262_read61_strand.fast5       2792a316-2e64-473b-a6ee-6ca6936e0341    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        262     343.64325       18.75475        5528    True    9.08025 5528    9.6745  5528    3484    11.555  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch480_read37_strand.fast5       57fae1d4-129e-4727-8118-251592a0fe4f    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        480     172.993 43.58275        24904   True    0.0     24904   43.58275        24904   16717   12.421  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch128_read57_strand.fast5       62ca0491-c0e0-42bc-a46a-031f9e6d2eac    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        128     417.494 16.065  4591    True    8.02925 4591    8.03575 4591    3108    9.95    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch508_read5_strand.fast5        dbb53601-02ec-42af-8d67-9603d8d5f938    a3f8b1fb56e77905d115a86ef283e1f838d7476d        508     54.844  7.549   4303    True    0.01725 4303    7.53175 4303    2680    10.605  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="57" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch258_read60_strand.fast5       e058bacf-e2d4-4503-81f3-57cb5e5b276a    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        258     254.314 14.529  8295    True    0.01225 8295    14.51675        8295    5692    11.466  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch78_read66_strand.fast5        c850a9b9-0ace-4be9-9034-e300580f6794    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        78      383.25175       36.819  21039   True    0.0     21039   36.819  21039   12068   9.109   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch76_read30_strand.fast5        4eb96854-c4a5-44eb-b96e-aaa2e750b700    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        76      183.23875       33.33675        19049   True    0.0     19049   33.33675        19049   11198   10.304  -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch41_read54_strand.fast5        0c093a62-ee3a-4d13-bd9c-17ba68494f0b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        41      362.6085        76.7405 8471    True    61.916  8471    14.8245 8471    5551    10.405  -0.0002</span>

</pre>

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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch218_read94_strand.fast5       7ff49798-84f1-4be9-b587-e8fcafc085e2    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        218     383.19025       56.1585 22996   True    15.9155 22996   40.243  22996   15222   9.896   -0.0003</span>

</pre>

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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch237_read55_strand.fast5       e9e62110-ceff-4d6d-82ee-650a6f3b0af0    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        237     362.6085        76.736  43849   True    0.0     43849   76.736  43849   27411   9.329   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch158_read35_strand.fast5       55c33490-3203-4af4-9b9a-768ce2384cc6    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        158     157.773 26.88   5356    True    17.5065 5356    9.3735  5356    3712    11.944  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch342_read31_strand.fast5       78c80974-17a2-439e-a3bf-ed78a5fd6233    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        342     138.7805        77.795  44454   True    0.0     44454   77.795  44454   23421   10.589  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch214_read43_strand.fast5       87bb9f4d-3a78-4762-9d98-b9c82f6954da    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        214     353.3395        9.0585  5176    True    0.0     5176    9.0585  5176    3158    10.322  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch342_read29_strand.fast5       860f733a-6740-4b7b-8fa9-255b4ff1fb29    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        342     119.32725       19.241  3521    True    13.07925        3521    6.16175 3521    2430    9.64    -0.0005</span>

</pre>

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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch82_read32_strand.fast5        ef8efd26-c10b-47c6-ba83-ad8292f7800b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        82      165.94225       50.63375        28851   True    0.1435  28851   50.49025        28851   17892   11.151  -0.0001</span>

</pre>

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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch143_read36_strand.fast5       e7657dc6-842c-4d94-b289-a60070596261    a3f8b1fb56e77905d115a86ef283e1f838d7476d        143     164.9415        36.5895 20908   True    0.0     20908   36.5895 20908   14531   12.264  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC69" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch361_read13_strand.fast5       19a10b91-eb2c-4ef5-af00-11ac5248eed8    a3f8b1fb56e77905d115a86ef283e1f838d7476d        361     164.94025       36.597  12510   True    14.7035 12510   21.8935 12510   8545    10.664  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch258_read62_strand.fast5       20fe2b80-92f4-432f-8c93-877de4a8eb99    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        258     274.365 8.62275 4917    True    0.01775 4917    8.605   4917    3503    10.626  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch149_read45_strand.fast5       d000b532-d08b-46d8-86ff-894e91d6d012    a3f8b1fb56e77905d115a86ef283e1f838d7476d        149     217.3105        17.336  7009    True    5.07025 7009    12.26575        7009    4673    10.426  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch104_read29_strand.fast5       3167daed-4f10-4549-821d-9a2e432511fd    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        104     127.955 10.60575        6060    True    0.0     6060    10.60575        6060    3997    10.236  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC73" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch384_read27_strand.fast5       090a83a5-7154-42ca-b7a3-6f7537cfcb5b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        384     140.9315        45.827  26160   True    0.0465  26160   45.7805 26160   17827   11.2    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch427_read26_strand.fast5       39377d80-2227-44fb-b57b-67dd25579b63    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        427     138.7865        14.948  8541    True    0.0     8541    14.948  8541    5678    11.992  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch196_read33_strand.fast5       777d0624-85dc-4492-abd2-67a7f1c62175    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        196     237.524 12.94375        7043    True    0.617   7043    12.32675        7043    1919    7.232   -0.0004</span>

</pre>

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76

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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch81_read3_strand.fast5 35e3d195-c3a9-46b8-b15c-40b1531c9831    a3f8b1fb56e77905d115a86ef283e1f838d7476d        81      22.223  40.1695 11088   True    20.7655 11088   19.404  11088   6730    8.685   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

77

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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch108_read27_strand.fast5       4aa362e0-fb22-4b01-9df2-763219cf14d3    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        108     138.78075       77.79475        43525   True    1.62525 43525   76.1695 43525   28250   10.58   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

78

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch510_read29_strand.fast5       a0240538-c678-463e-9102-738cf6ccd4ef    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        510     119.33975       19.2285 3999    True    12.23025        3999    6.99825 3999    2587    9.604   -0.0004</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

79

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC79" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch194_read64_strand.fast5       1d349f09-7798-491c-aafa-e8306cbb035e    a3f8b1fb56e77905d115a86ef283e1f838d7476d        194     164.937 36.594  10601   True    18.04075        10601   18.55325        10601   6192    9.318   -0.0003</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

80

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch341_read26_strand.fast5       266f3057-7d66-433f-bc90-e6288f2eea60    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        341     210.437 6.134   3505    True    0.0     3505    6.134   3505    2247    12.58   -0.0005</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

81

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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch143_read33_strand.fast5       78e444cb-bc62-4bfa-a396-18e42850a1a9    a3f8b1fb56e77905d115a86ef283e1f838d7476d        143     147.26175       17.43675        1307    True    15.1495 1307    2.28725 1307    916     12.317  -0.0016</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

82

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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch333_read166_strand.fast5      50470a53-badf-47e4-9bbf-64b2bfdd2f17    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        333     425.84975       13.49925        7664    True    0.0865  7664    13.41275        7664    5132    9.941   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

83

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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch210_read66_strand.fast5       68b728f4-5ea6-447a-9c9a-4081ec4300ba    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        210     362.60825       76.7405 31952   True    20.82425        31952   55.91625        31952   19584   10.909  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

84

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC84" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch82_read35_strand.fast5        230d83b6-4aa5-4cd7-bdbc-e564f62cd461    a3f8b1fb56e77905d115a86ef283e1f838d7476d        82      147.267 17.43875        4755    True    9.11625 4755    8.3225  4755    3157    8.561   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC85" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch226_read68_strand.fast5       86afb306-f51f-4174-abd0-2d09c06ae7d6    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        226     362.60825       76.7405 43851   True    0.0     43851   76.7405 43851   26677   11.533  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC86" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read36_strand.fast5       9b5ab24e-9b25-42a1-8bc2-82ee39d7057e    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        275     242.3305        8.13725 4640    True    0.01575 4640    8.1215  4640    3125    12.209  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch509_read59_strand.fast5       cae89adc-7185-4485-9b22-1b0364129989    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        509     362.6085        44.72325        25556   True    0.0     25556   44.72325        25556   15775   10.607  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

88

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<pre style="margin: 0;">+<span id="LC88" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch32_read44_strand.fast5        54ad2d30-0f03-4249-bdd1-fa2273802bd2    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        32      289.51725       38.43925        21930   True    0.06175 21930   38.3775 21930   14665   11.967  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch379_read41_strand.fast5       cbbc02a9-efa7-4ed4-a073-40a01afbf0df    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        379     362.60875       76.74   17377   True    46.32925        17377   30.41075        17377   10896   8.852   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC90" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch472_read31_strand.fast5       7f8978fe-5931-43ae-b34c-76dc3b0fcad0    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        472     232.259 18.209  5796    True    8.066   5796    10.143  5796    3609    9.541   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch321_read27_strand.fast5       eeb937a9-f150-43cd-9c92-9148ebf8c827    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        321     138.78075       75.32375        37675   True    9.39225 37675   65.9315 37675   24566   10.77   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC92" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch162_read31_strand.fast5       a2602315-76be-485a-aa4b-f485e880e99d    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        162     119.33825       19.226  4504    True    11.343  4504    7.883   4504    2527    7.495   -0.0004</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC93" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch151_read23_strand.fast5       2870d465-ac8c-46d9-ba88-843c4cac5292    a3f8b1fb56e77905d115a86ef283e1f838d7476d        151     164.93175       15.80575        9031    True    0.0     9031    15.80575        9031    6030    10.901  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

94

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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch7_read73_strand.fast5 aa26b7da-fba6-4e91-9714-aba2fbe59218    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        7       295.353 21.82025        10218   True    3.93775 10218   17.8825 10218   5331    7.388   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

95

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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch14_read32_strand.fast5        8fa6c937-0e5b-4375-993c-24116207dfbc    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        14      250.694 77.26225        28289   True    27.7555 28289   49.50675        28289   7689    10.399  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC96" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch73_read46_strand.fast5        b690c30b-b325-421e-bef8-555a476d4981    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        73      416.19375       23.155  1346    True    20.79825        1346    2.35675 1346    821     7.758   -0.0011</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

97

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<pre style="margin: 0;">+<span id="LC97" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch214_read45_strand.fast5       fb98ce1c-e9f6-4f10-a823-e6e484aa8808    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        214     362.60825       58.70375        33545   True    0.0     33545   58.70375        33545   18771   10.207  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

98

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch384_read29_strand.fast5       db122386-830f-4f45-ad12-558bcd388ddf    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        384     204.22625       12.34975        7020    True    0.06375 7020    12.286  7020    4700    11.901  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

99

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<pre style="margin: 0;">+<span id="LC99" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch234_read61_strand.fast5       28040b6a-47f5-4651-ab72-4f9cb1202fb8    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        234     232.25925       18.2085 9586    True    1.43225 9586    16.77625        9586    6124    8.342   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC100" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read42_strand.fast5      a361b413-393d-4f48-ab9f-52f7f65f514a    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        275     261.50575       5.71125 3263    True    0.0     3263    5.71125 3263    2017    10.906  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch509_read57_strand.fast5      25cec62b-2816-4413-8f15-4bc151d1a95d    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        509     357.17575       5.2225  2973    True    0.01925 2973    5.20325 2973    1957    11.162  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch81_read48_strand.fast5       ec7e99c4-0ea3-4eb4-9365-c76edd376cd5    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        81      187.27325       9.82725 5591    True    0.043   5591    9.78425 5591    3652    10.391  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC103" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch52_read32_strand.fast5       46eb9dcf-08de-4a10-86ab-c3cac88974a0    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        52      232.259 18.20875        2888    True    13.15325        2888    5.0555  2888    1872    10.187  -0.0007</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch286_read62_strand.fast5      1e65a384-677a-40f8-83f4-ae91a0da697b    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        286     237.05575       13.412  7637    True    0.04575 7637    13.36625        7637    4825    8.592   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch172_read35_strand.fast5      2d32b7e0-d1e1-4599-82bc-356ffdfe75bf    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        172     146.066 57.581  32882   True    0.03725 32882   57.54375        32882   22812   11.596  -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC106" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch104_read64_strand.fast5      60f664ec-9e53-4e59-9c61-6c677f9682f8    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        104     241.21625       1.663   950     True    0.0     950     1.663   950     552     7.088   -0.0024</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch172_read13_strand.fast5      cda9680f-3cac-4431-aef3-66e319444751    a3f8b1fb56e77905d115a86ef283e1f838d7476d        172     164.9385        36.5925 18188   True    4.76225 18188   31.83025        18188   11991   9.007   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch142_read62_strand.fast5      fe997c4d-ffed-42c9-a28f-d3d3ba298361    a3f8b1fb56e77905d115a86ef283e1f838d7476d        142     164.94575       36.58525        20905   True    0.0     20905   36.58525        20905   11880   9.707   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

109

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<pre style="margin: 0;">+<span id="LC109" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch89_read27_strand.fast5       39eadbd8-acc8-4751-857d-4b5554b8ca70    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        89      232.2595        18.20875        4310    True    10.66575        4310    7.543   4310    2832    11.134  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC110" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch10_read50_strand.fast5       a56078bb-cece-4929-a19b-501bddf5d903    a3f8b1fb56e77905d115a86ef283e1f838d7476d        10      164.936 36.59475        11989   True    15.6125 11989   20.98225        11989   7179    9.533   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC111" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch374_read37_strand.fast5      9e0013b4-48a2-4bcb-8674-88aabba1dd8c    a3f8b1fb56e77905d115a86ef283e1f838d7476d        374     166.70875       34.82225        19870   True    0.04925 19870   34.773  19870   12927   8.966   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC112" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch144_read29_strand.fast5      41253824-9276-4c57-b286-5f59394c3bf3    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        144     138.7805        1.342   766     True    0.0     766     1.342   766     470     8.738   -0.0025</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch78_read63_strand.fast5       8a2a70a2-f032-4c81-a754-cdac8b442988    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        78      374.225 8.83    5037    True    0.01425 5037    8.81575 5037    3565    9.18    -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch77_read19_strand.fast5       629c309d-cb48-41e7-8e32-59eab234bca6    a3f8b1fb56e77905d115a86ef283e1f838d7476d        77      78.179  18.32675        2596    True    13.783  2596    4.54375 2596    1753    9.939   -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch160_read61_strand.fast5      362ce9e8-a39c-4663-b425-f27bdd091431    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        160     414.74875       24.59975        9682    True    7.656   9682    16.94375        9682    6333    13.288  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch218_read36_strand.fast5      dbdf6666-973d-483a-a73c-1b6a8d5ca4a9    a3f8b1fb56e77905d115a86ef283e1f838d7476d        218     159.33725       5.361   3048    True    0.02625 3048    5.33475 3048    1987    10.122  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC117" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch191_read35_strand.fast5      11101d35-375b-4ce8-818d-7c97990014d0    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        191     154.064 15.59   8908    True    0.0     8908    15.59   8908    6387    11.12   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch275_read51_strand.fast5      c7cd7cf7-7cbd-4928-81de-93e7927f3687    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        275     297.33075       30.6255 17500   True    0.0     17500   30.6255 17500   12063   12.138  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch155_read23_strand.fast5      e551dd73-4c75-4465-937a-56cbb413ce5e    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        155     119.331 19.23325        2849    True    14.247  2849    4.98625 2849    1910    11.22   -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC120" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch258_read63_strand.fast5      43f3b367-235a-4f29-bb58-b41355f3b8a8    a3f8b1fb56e77905d115a86ef283e1f838d7476d        258     155.871 8.8315  5012    True    0.05975 5012    8.77175 5012    3394    11.9    -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC121" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch216_read30_strand.fast5      5c576265-6d59-417b-9a60-97cc70d59039    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        216     143.02225       18.701  10677   True    0.016   10677   18.685  10677   7029    12.168  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC122" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch117_read28_strand.fast5      0639b34e-093d-46aa-8e5a-5a7afce95072    a3f8b1fb56e77905d115a86ef283e1f838d7476d        117     164.93825       36.59275        20900   True    0.017   20900   36.57575        20900   12846   9.958   -0.0002</span>

</pre>

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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch474_read26_strand.fast5      122b770d-de64-4a58-b1b3-c56e88341045    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        474     119.33825       19.23   8439    True    4.46125 8439    14.76875        8439    5554    10.669  -0.0002</span>

</pre>

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<pre style="margin: 0;">+<span id="LC124" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch478_read36_strand.fast5      162329e5-5f74-4677-b8cd-f2b2e094f520    a3f8b1fb56e77905d115a86ef283e1f838d7476d        478     147.2665        17.43275        1726    True    14.411  1726    3.02175 1726    1079    8.83    -0.0011</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch460_read40_strand.fast5      6ffdfd8c-33fc-4712-a9bc-ca2dcdccadbb    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        460     250.694 77.2625 18383   True    45.092  18383   32.1705 18383   10776   10.212  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_10881_ch75_read38_strand.fast5       af3573e0-5cdb-46c7-b451-8cfc14f8ce4e    a3f8b1fb56e77905d115a86ef283e1f838d7476d        75      87.518  8.97975 5113    True    0.032   5113    8.94775 5113    2566    7.273   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch7_read76_strand.fast5        74edd3c4-43a0-4613-b2d5-ee21389245ab    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        7       320.661 4.143   2367    True    0.0     2367    4.143   2367    1376    7.717   -0.0008</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC128" class="line" lang="plaintext">nanopore2_20170303_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_26713_ch201_read63_strand.fast5      71946314-2f93-4708-b880-04e77b201918    9ff0fede59c6669aa7f0d860aa73a4f0959d4b99        201     351.683 10.7105 6120    True    0.0     6120    10.7105 6120    3235    11.68   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC129" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch77_read24_strand.fast5       25566b20-20f6-4ac8-9bb1-f607d8e0a155    a21aacee4115455d15f5783d4115ff1a5edc05c2        77      134.0755        78.73775        44993   True    0.0     44993   78.73775        44993   30305   10.134  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch41_read15_strand.fast5       207faef5-79f2-4d3a-acc0-68120f3ba8de    a17eb30893af29b61a9da687a20b3b4df8cc40a1        41      103.4005        29.03325        16580   True    0.018   16580   29.01525        16580   11448   12.32   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC131" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch203_read19_strand.fast5      a07582da-22b8-40e9-935c-d9373603ad29    a17eb30893af29b61a9da687a20b3b4df8cc40a1        203     92.312  28.84725        13478   True    5.26075 13478   23.5865 13478   9497    11.978  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC132" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch341_read20_strand.fast5      e6dd696c-c153-48a2-8372-ddaef1357e3d    a17eb30893af29b61a9da687a20b3b4df8cc40a1        341     95.983  36.44775        20470   True    0.625   20470   35.82275        20470   13798   12.265  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch371_read37_strand.fast5      4579af5a-b32a-413d-8b88-38025fa6c1af    a21aacee4115455d15f5783d4115ff1a5edc05c2        371     247.618 72.67275        41527   True    0.0     41527   72.67275        41527   27834   12.919  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch181_read34_strand.fast5      b33e99a3-69fd-49e9-a66b-2dcda27d1413    a21aacee4115455d15f5783d4115ff1a5edc05c2        181     124.21925       9.634   5481    True    0.04225 5481    9.59175 5481    3844    10.219  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch180_read32_strand.fast5      97dcfa31-33ea-49c5-a49e-7938893d8fc4    a21aacee4115455d15f5783d4115ff1a5edc05c2        180     279.5005        17.30675        9875    True    0.02425 9875    17.2825 9875    3406    11.619  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC136" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch189_read20_strand.fast5      5d449104-e343-4512-969c-3a2a10bfb251    a17eb30893af29b61a9da687a20b3b4df8cc40a1        189     92.3105 40.1155 10262   True    22.1555 10262   17.96   10262   6558    9.573   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch217_read40_strand.fast5      7062c204-081c-4071-bd48-fb05db3ff62a    a17eb30893af29b61a9da687a20b3b4df8cc40a1        217     168.4475        34.02875        15027   True    7.731   15027   26.29775        15027   8858    12.036  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC138" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch269_read14_strand.fast5      72e366f5-f8c8-454f-ac35-3fd301eb1a3d    a17eb30893af29b61a9da687a20b3b4df8cc40a1        269     77.26225        18.72075        3152    True    13.20375        3152    5.517   3152    1892    9.282   -0.0007</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC139" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch473_read58_strand.fast5      2661b16d-4d94-4552-9804-69e509dcab0e    a21aacee4115455d15f5783d4115ff1a5edc05c2        473     247.60275       57.613  32921   True    0.0     32921   57.613  32921   25101   8.154   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

140

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<pre style="margin: 0;">+<span id="LC140" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch485_read2_strand.fast5       6badc22a-d4c9-420a-9977-d7681e5d137a    a17eb30893af29b61a9da687a20b3b4df8cc40a1        485     21.498  40.108  4608    True    32.04275        4608    8.06525 4608    3113    12.082  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

141

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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch138_read5_strand.fast5       e1261168-6916-4c3c-956f-1d88bc6fcc4b    a21aacee4115455d15f5783d4115ff1a5edc05c2        138     33.38625        67.51675        28562   True    17.5325 28562   49.98425        28562   16985   8.997   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC142" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch342_read21_strand.fast5      01b2583b-2a30-460f-9f8e-c9db19c822f8    a21aacee4115455d15f5783d4115ff1a5edc05c2        342     134.0685        78.74475        44997   True    0.0     44997   78.74475        44997   31535   11.152  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

143

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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch1_read25_strand.fast5        db2a9cc3-a4cf-4313-8e04-e44b5ef2491c    a17eb30893af29b61a9da687a20b3b4df8cc40a1        1       78.0215 17.75125        5447    True    8.2175  5447    9.53375 5447    2413    8.153   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch381_read48_strand.fast5      84da7953-3178-4b69-86d6-2d1ec7847692    a21aacee4115455d15f5783d4115ff1a5edc05c2        381     247.6005        39.614  22636   True    0.0     22636   39.614  22636   16074   10.254  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch250_read35_strand.fast5      53dc6a08-da49-4bb4-a33d-e65a6765be6b    a21aacee4115455d15f5783d4115ff1a5edc05c2        250     228.568 18.83475        1533    True    16.152  1533    2.68275 1533    1009    7.386   -0.0013</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch160_read41_strand.fast5      bb914f49-16b8-407b-a41f-27aab50a96f8    a17eb30893af29b61a9da687a20b3b4df8cc40a1        160     218.312 18.1805 6213    True    7.30675 6213    10.87375        6213    4019    10.634  -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC147" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch64_read31_strand.fast5       e902bd3d-c01f-4eea-9c0d-88499dc7edfa    a21aacee4115455d15f5783d4115ff1a5edc05c2        64      238.03425       9.36675 5336    True    0.0285  5336    9.33825 5336    3619    10.521  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch82_read45_strand.fast5       7e5d1110-1fe0-49e7-828e-e189212a1ece    a21aacee4115455d15f5783d4115ff1a5edc05c2        82      300.661 23.52975        13434   True    0.0195  13434   23.51025        13434   8109    11.272  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC149" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch79_read4_strand.fast5        356ca436-6b1b-4070-87bd-5b857915da72    a17eb30893af29b61a9da687a20b3b4df8cc40a1        79      31.17425        30.43175        17312   True    0.1345  17312   30.29725        17312   9063    8.18    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch131_read22_strand.fast5      02ace671-c52d-48fe-a504-1becd95a10dc    a17eb30893af29b61a9da687a20b3b4df8cc40a1        131     123.082 9.351   4578    True    1.33925 4578    8.01175 4578    2877    8.931   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch458_read36_strand.fast5      12c5beea-f48b-4747-b79a-20607b941350    a21aacee4115455d15f5783d4115ff1a5edc05c2        458     228.568 18.82975        8695    True    3.6125  8695    15.21725        8695    5807    12.238  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC152" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch330_read28_strand.fast5      4446a2b3-ae9a-48bb-a1d4-71334a35b5c6    a17eb30893af29b61a9da687a20b3b4df8cc40a1        330     95.98275        36.451  20826   True    0.00525 20826   36.44575        20826   5838    10.999  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC153" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch333_read35_strand.fast5      965f0963-9027-4fb0-8ee9-ece73366bbdc    a17eb30893af29b61a9da687a20b3b4df8cc40a1        333     95.983  36.4565 14752   True    10.639  14752   25.8175 14752   9425    9.145   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch474_read93_strand.fast5      84782427-e30e-4487-bd87-d283fbe5b8d1    a17eb30893af29b61a9da687a20b3b4df8cc40a1        474     218.32325       18.1605 3717    True    11.65425        3717    6.50625 3717    2351    11.853  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

155

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<pre style="margin: 0;">+<span id="LC155" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch41_read22_strand.fast5       6c017707-4b33-4c37-9ecf-c2516801ed50    a21aacee4115455d15f5783d4115ff1a5edc05c2        41      125.60875       8.2445  4692    True    0.03275 4692    8.21175 4692    2997    10.782  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC156" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch32_read18_strand.fast5       a05b41ad-6dc9-4484-9692-8af1bc037bfe    a17eb30893af29b61a9da687a20b3b4df8cc40a1        32      77.262  55.1715 18235   True    23.26   18235   31.9115 18235   12485   10.105  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC157" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch485_read3_strand.fast5       ae277ee4-46c8-422c-9b90-c422cc376ce2    a21aacee4115455d15f5783d4115ff1a5edc05c2        485     22.27575        20.844  6081    True    10.20075        6081    10.64325        6081    4156    12.785  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC158" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch450_read29_strand.fast5      d5fd98a2-df8d-4e62-adb4-a69cf6ae7aa0    a17eb30893af29b61a9da687a20b3b4df8cc40a1        450     95.98275        36.45075        14384   True    11.27825        14384   25.1725 14384   9155    8.488   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC159" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch369_read22_strand.fast5      0f4cc15d-9338-41f4-8f6d-3a8a0efdd57b    a17eb30893af29b61a9da687a20b3b4df8cc40a1        369     166.43875       36.0375 20592   True    0.0     20592   36.0375 20592   12968   10.211  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC160" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch428_read31_strand.fast5      a116c0bb-0ee0-401b-9174-cb575363d095    a21aacee4115455d15f5783d4115ff1a5edc05c2        428     228.5765        18.829  3212    True    13.207  3212    5.622   3212    2150    12.693  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC161" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch163_read19_strand.fast5      23f0e211-95a2-461f-92d6-5cb47e2a406c    a17eb30893af29b61a9da687a20b3b4df8cc40a1        163     77.26225        55.163  27976   True    6.20375 27976   48.95925        27976   15088   10.591  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch262_read20_strand.fast5      b6cd690a-30fb-4812-8da8-186dd5c8a61d    a21aacee4115455d15f5783d4115ff1a5edc05c2        262     203.2955        9.51775 5374    True    0.11325 5374    9.4045  5374    3726    10.756  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC163" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch381_read46_strand.fast5      24009b7b-1a6f-4482-881a-1d3f165a59b7    a21aacee4115455d15f5783d4115ff1a5edc05c2        381     236.32575       11.08   6331    True    0.0     6331    11.08   6331    4577    10.958  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC164" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch333_read83_strand.fast5      bb920c41-3a64-46fc-ab87-4abbc2fcaa5a    a17eb30893af29b61a9da687a20b3b4df8cc40a1        333     236.70275       35.53325        16794   True    6.14375 16794   29.3895 16794   5117    9.03    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC165" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch362_read45_strand.fast5      cbe5bf7e-3a6a-42bc-84b2-f470e9c40024    a17eb30893af29b61a9da687a20b3b4df8cc40a1        362     218.312 53.924  20424   True    18.18075        20424   35.74325        20424   5511    10.354  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC166" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch193_read5_strand.fast5       940b784c-7e81-46ae-876b-64fd2e812694    a21aacee4115455d15f5783d4115ff1a5edc05c2        193     24.43725        22.7635 13001   True    0.01025 13001   22.75325        13001   6180    7.07    -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC167" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch25_read27_strand.fast5       85b98079-f6d7-49bd-ae77-9e58af074989    a21aacee4115455d15f5783d4115ff1a5edc05c2        25      247.606 76.5845 43762   True    0.0     43762   76.5845 43762   28517   10.689  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC168" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch341_read51_strand.fast5      a06d379b-b40b-4746-9d11-1ddd398f9497    a21aacee4115455d15f5783d4115ff1a5edc05c2        341     231.94975       15.45325        7793    True    1.81425 7793    13.639  7793    4060    10.006  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC169" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch221_read4_strand.fast5       8c343e96-dffb-4df0-a769-8299f08a5e83    a21aacee4115455d15f5783d4115ff1a5edc05c2        221     22.27525        78.62725        38236   True    11.713  38236   66.91425        38236   24914   9.689   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

170

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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch504_read21_strand.fast5      65e6e144-962e-4e7e-b42f-f33f9af39422    a17eb30893af29b61a9da687a20b3b4df8cc40a1        504     95.98275        36.45075        6245    True    25.52075        6245    10.93   6245    4114    8.948   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

171

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<pre style="margin: 0;">+<span id="LC171" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch342_read19_strand.fast5      c743f660-ee1c-4c78-9545-a55516c1bfc5    a21aacee4115455d15f5783d4115ff1a5edc05c2        342     129.848 4.005   2235    True    0.09225 2235    3.91275 2235    1600    11.107  -0.0009</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

172

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<pre style="margin: 0;">+<span id="LC172" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch286_read6_strand.fast5       0d489386-cf36-4d7d-8886-e4034cce3333    a21aacee4115455d15f5783d4115ff1a5edc05c2        286     90.75925        10.1435 5757    True    0.06875 5757    10.07475        5757    3976    11.399  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

173

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<pre style="margin: 0;">+<span id="LC173" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch426_read11_strand.fast5      57040e66-8bb8-42fc-863a-b7f75dc11752    a17eb30893af29b61a9da687a20b3b4df8cc40a1        426     103.1845        29.24925        11891   True    8.43925 11891   20.81   11891   7318    8.631   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

174

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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch111_read5_strand.fast5       130b760d-08f6-49df-8804-0b6c8d6e099d    a21aacee4115455d15f5783d4115ff1a5edc05c2        111     27.01   73.89275        42210   True    0.02375 42210   73.869  42210   29548   11.223  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

175

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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch374_read33_strand.fast5      c0131b5a-b51b-4c00-aa8b-93ce4e545d33    a21aacee4115455d15f5783d4115ff1a5edc05c2        374     230.7225        15.94475        9086    True    0.04375 9086    15.901  9086    6906    9.848   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

176

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<pre style="margin: 0;">+<span id="LC176" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch116_read37_strand.fast5      ac624bf8-dfff-4905-bf57-0dc5e4cbcabf    a17eb30893af29b61a9da687a20b3b4df8cc40a1        116     238.70875       33.52725        18017   True    1.996   18017   31.53125        18017   8389    7.219   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

177

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<pre style="margin: 0;">+<span id="LC177" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch109_read30_strand.fast5      71e75d20-ba7f-4af9-8f14-f9169c04602b    a21aacee4115455d15f5783d4115ff1a5edc05c2        109     247.40575       15.13625        8649    True    0.0     8649    15.13625        8649    4692    11.074  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC178" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch187_read13_strand.fast5      bf984e5f-0769-4160-96cd-ca5f2783d4a4    a17eb30893af29b61a9da687a20b3b4df8cc40a1        187     77.26225        55.1715 26658   True    8.51975 26658   46.65175        26658   7277    9.762   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC179" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch99_read25_strand.fast5       7c32c3a7-97f8-49b2-b703-0e52c580c892    a17eb30893af29b61a9da687a20b3b4df8cc40a1        99      77.27475        55.156  20947   True    18.49825        20947   36.65775        20947   4876    9.759   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC180" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch77_read16_strand.fast5       b91e15f5-ffcd-4a39-9524-f13eb3c402b7    a17eb30893af29b61a9da687a20b3b4df8cc40a1        77      77.26225        55.1715 25019   True    11.38675        25019   43.78475        25019   5473    9.215   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC181" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch496_read17_strand.fast5      8e7ffea0-ec6e-4c34-8ac2-69391ba38451    a17eb30893af29b61a9da687a20b3b4df8cc40a1        496     77.26225        55.17125        7463    True    42.111  7463    13.06025        7463    4879    9.973   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC182" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch77_read21_strand.fast5       3788f0e5-3c7d-4e88-a0bb-67b3f8330ba9    a21aacee4115455d15f5783d4115ff1a5edc05c2        77      124.31925       9.534   5426    True    0.03725 5426    9.49675 5426    4046    9.595   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC183" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch428_read32_strand.fast5      759ff736-81ec-4262-ae52-6ff8187c948e    a21aacee4115455d15f5783d4115ff1a5edc05c2        428     247.4055        76.785  43877   True    0.0     43877   76.785  43877   28787   12.6    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC184" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch1_read27_strand.fast5        735a70b8-8af0-47bc-a946-40c4260d3ea9    a17eb30893af29b61a9da687a20b3b4df8cc40a1        1       95.983  36.45075        20829   True    0.0     20829   36.45075        20829   7515    7.47    -0.0003</span>

</pre>

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<pre style="margin: 0;">+<span id="LC185" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch144_read28_strand.fast5      4ddc4d8c-e91d-4840-8d25-69605746e85b    a21aacee4115455d15f5783d4115ff1a5edc05c2        144     339.97675       16.68775        3514    True    10.5375 3514    6.15025 3514    2123    9.449   -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

186

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<pre style="margin: 0;">+<span id="LC186" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch455_read60_strand.fast5      8bab06cb-328c-488b-b516-d18196771596    a17eb30893af29b61a9da687a20b3b4df8cc40a1        455     236.70275       35.53325        20304   True    0.0     20304   35.53325        20304   5284    9.571   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

187

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<pre style="margin: 0;">+<span id="LC187" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch79_read85_strand.fast5       49e36e8d-4319-4f63-9b61-b1f4c11a32de    a21aacee4115455d15f5783d4115ff1a5edc05c2        79      228.57425       18.8315 2931    True    13.702  2931    5.1295  2931    1279    7.066   -0.001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

188

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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch394_read44_strand.fast5      a76fbb73-65a4-45eb-b97f-36712b6deee8    a17eb30893af29b61a9da687a20b3b4df8cc40a1        394     238.70875       33.52725        14752   True    7.70975 14752   25.8175 14752   9693    9.785   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC189" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch36_read24_strand.fast5       7731ece1-f8cc-458e-a866-2ce68a299312    a17eb30893af29b61a9da687a20b3b4df8cc40a1        36      95.98275        36.45075        11872   True    15.67425        11872   20.7765 11872   8135    11.402  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

190

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<pre style="margin: 0;">+<span id="LC190" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch479_read29_strand.fast5      ab1c76f7-67d1-45e3-b1ca-d6684b00adda    a17eb30893af29b61a9da687a20b3b4df8cc40a1        479     77.27275        18.49725        6399    True    7.29875 6399    11.1985 6399    2783    7.298   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

191

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<pre style="margin: 0;">+<span id="LC191" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch81_read28_strand.fast5       571358bc-a566-48b0-9963-8fea16f478fc    a17eb30893af29b61a9da687a20b3b4df8cc40a1        81      95.983  36.4475 20827   True    0.0     20827   36.4475 20827   12961   9.217   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

192

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<pre style="margin: 0;">+<span id="LC192" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch341_read40_strand.fast5      f8861d75-cb32-4535-8d69-dbbade1de9a7    a17eb30893af29b61a9da687a20b3b4df8cc40a1        341     218.31225       18.3905 10335   True    0.30325 10335   18.08725        10335   4196    9.479   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC193" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch371_read34_strand.fast5      c6b70db9-464e-4926-9d46-761ed3533164    a21aacee4115455d15f5783d4115ff1a5edc05c2        371     228.57725       18.8285 7973    True    4.87575 7973    13.95275        7973    5448    13.076  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC194" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch201_read27_strand.fast5      dcb5af9f-cae0-4de4-b3d7-864c1bb7343c    a17eb30893af29b61a9da687a20b3b4df8cc40a1        201     92.31125        40.1225 20154   True    4.85275 20154   35.26975        20154   12837   9.007   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_66781_ch244_read24_strand.fast5      4c6fb4ca-c6a9-4aee-acf7-d4c13939144f    a17eb30893af29b61a9da687a20b3b4df8cc40a1        244     77.262  55.17175        22813   True    15.2485 22813   39.92325        22813   12674   9.197   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC196" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch281_read4_strand.fast5       1724dd1c-9554-4841-a2d6-e8abb6339e51    a21aacee4115455d15f5783d4115ff1a5edc05c2        281     22.27525        78.6275 44698   True    0.40475 44698   78.22275        44698   28168   10.048  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC197" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_mux_scan_170301_MG1655_PC_RAD002_32635_ch504_read62_strand.fast5      2645e3aa-5759-486c-a3fd-cb3a480f91d9    a21aacee4115455d15f5783d4115ff1a5edc05c2        504     247.6055        50.1515 9889    True    32.8445 9889    17.307  9889    2318    10.588  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC198" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read10_strand.fast5        bcb22d79-b267-44ba-94c0-1493ed4ea54a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        130     978.23825       904.05775       229523  True    502.39125       229523  401.6665        229523  34562   7.876   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC199" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read24_strand.fast5 fe6bbcb4-c11b-4445-900e-4f4446fb7514    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      951.754 5.66275 2463    True    1.3515  2463    4.31125 2463    1617    12.695  -0.0004</span>

</pre>

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<pre style="margin: 0;">+<span id="LC200" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch466_read49_strand.fast5        a2479ac3-8b52-4237-8f01-22fd55f87e63    b5e83402e47ea9927694cb6e80d61180dfc8a49a        466     2059.453        62.21075        16138   True    33.96775        16138   28.243  16138   10757   11.02   -0.0001</span>

</pre>

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<pre style="margin: 0;">+<span id="LC201" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch456_read414_strand.fast5       15b4b4ad-9461-4431-b029-260b53a52234    b5e83402e47ea9927694cb6e80d61180dfc8a49a        456     6994.94 170.68075       86153   True    19.913  86153   150.76775       86153   46661   7.206   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC202" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch460_read66_strand.fast5        f13ce9fd-b199-4926-80dd-f54d3f555ce0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        460     4779.71375      74.78675        16162   True    46.50275        16162   28.284  16162   4304    8.258   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC203" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch486_read15_strand.fast5        3398bada-950d-49b1-84dc-ed2aec3a9c8e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        486     1375.9145       35.9085 15456   True    8.8605  15456   27.048  15456   5205    10.859  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC204" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read94_strand.fast5 9240a4fa-9745-4279-8f48-5ea9dbf877e2    b5e83402e47ea9927694cb6e80d61180dfc8a49a        82      3407.66425      133.984 69815   True    11.80625        69815   122.17775       69815   47130   10.795  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC205" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch146_read166_strand.fast5       eeee5f12-d7bc-41fe-a102-1415033db7b7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        146     1324.89725      28.7115 10176   True    10.90275        10176   17.80875        10176   5685    7.388   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC206" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch450_read37_strand.fast5        5f01781c-5b2b-40ad-a9b6-7e31d10a7d00    b5e83402e47ea9927694cb6e80d61180dfc8a49a        450     2820.9115       4.87075 1933    True    1.4865  1933    3.38425 1933    1384    8.508   -0.0009</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC207" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch480_read184_strand.fast5       6564aec5-e2a5-475d-96be-65a5bb8235f0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        480     7109.833        55.78775        5554    True    46.067  5554    9.72075 5554    3745    11.043  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC208" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch230_read166_strand.fast5       fd986643-0205-48c1-b073-3f1b63c754a4    b5e83402e47ea9927694cb6e80d61180dfc8a49a        230     4851.89725      73.0255 5585    True    63.251  5585    9.7745  5585    3121    7.024   -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC209" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read28_strand.fast5        7925d0ba-54e5-4380-8982-272b5db8944a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        451     1121.3775       107.0485        46719   True    25.29025        46719   81.75825        46719   31669   10.48   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC210" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch510_read176_strand.fast5       196c712c-681e-40ae-9bab-dc10ef2520b0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        510     1812.2185       85.701  45800   True    5.551   45800   80.15   45800   29590   10.338  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read165_strand.fast5       1e2d92bd-7db1-4af1-9575-b076ebe270e1    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     4242.75525      1.22325 699     True    0.0     699     1.22325 699     452     10.763  -0.0021</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC212" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read59_strand.fast5        cffeab45-65c7-4307-8d0d-d3a166b421a6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        451     2621.16125      177.64125       5195    True    168.54975       5195    9.0915  5195    2605    10.091  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC213" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read161_strand.fast5       2226c271-0f3f-4382-8310-2deac247ad17    b5e83402e47ea9927694cb6e80d61180dfc8a49a        355     6273.68875      41.3395 20902   True    4.76    20902   36.5795 20902   12215   9.476   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC214" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch140_read382_strand.fast5       43178b7b-0b39-4cfc-8f45-d8bcfc3a6d60    b5e83402e47ea9927694cb6e80d61180dfc8a49a        140     4851.789        54.23325        22638   True    14.61675        22638   39.6165 22638   12458   7.385   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC215" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch240_read492_strand.fast5       b6bca176-ca68-43da-b343-4ab347129179    b5e83402e47ea9927694cb6e80d61180dfc8a49a        240     5366.3005       29.951  6869    True    17.9295 6869    12.0215 6869    4412    9.251   -0.0001</span>

</pre>

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<pre style="margin: 0;">+<span id="LC216" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read133_strand.fast5       230166aa-82ec-43a2-ab27-1e13bb2d6315    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     3211.29025      15.884  1025    True    14.09025        1025    1.79375 1025    734     10.485  -0.0014</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC217" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch32_read74_strand.fast5 5c3d3eb2-c6e6-4d32-a85a-25549093e36a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        32      5397.25175      212.03875       88422   True    57.29975        88422   154.739 88422   41951   7.306   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC218" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read30_strand.fast5        96eca569-8bbc-4aeb-8ac9-df5ec2d2e3da    b5e83402e47ea9927694cb6e80d61180dfc8a49a        130     2394.98625      164.113 61409   True    56.64725        61409   107.46575       61409   21803   7.058   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC219" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch194_read705_strand.fast5       25b60464-d222-4fed-850d-0dd72aabd494    b5e83402e47ea9927694cb6e80d61180dfc8a49a        194     6943.93825      33.16525        11926   True    12.29325        11926   20.872  11926   6450    7.134   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC220" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch416_read9_strand.fast5 73d30dd4-2c0b-4bfb-9bab-e3d21b3ff72a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        416     93.68625        252.9995        140395  True    7.30825 140395  245.69125       140395  36482   8.808   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch130_read21_strand.fast5        81c009b8-41bf-4b1b-a773-e9f0d7e7478c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        130     2116.23 133.44775       71769   True    7.85125 71769   125.5965        71769   20497   7.344   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC222" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read117_strand.fast5       c2c3df2d-3a86-44c1-98f6-b167fde8a7f0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        212     6217.24475      79.95375        12206   True    58.59175        12206   21.362  12206   2028    9.725   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC223" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read68_strand.fast5 54a992ea-88ab-4661-87d6-90a919e9b2f7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      1989.97075      51.33025        6080    True    40.689  6080    10.64125        6080    4224    12.107  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch427_read145_strand.fast5       b1e9d96a-dccd-4937-aae5-aaac51ea87c7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        427     6315.02825      225.826 129043  True    0.0     129043  225.826 129043  79167   8.398   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC225" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch473_read77_strand.fast5        775ca319-1b61-485a-a12a-977508501577    b5e83402e47ea9927694cb6e80d61180dfc8a49a        473     2870.97 405.441 194623  True    64.85075        194623  340.59025       194623  126296  11.302  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC226" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch389_read535_strand.fast5       d249a203-dabf-44ee-bfcc-be7b7e90f71d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        389     4733.7005       46.0135 25850   True    0.7745  25850   45.239  25850   12712   7.765   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC227" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch198_read534_strand.fast5       8196e72f-68a0-4ff0-b9e8-b77c14baeb66    b5e83402e47ea9927694cb6e80d61180dfc8a49a        198     6032.304        111.7135        62527   True    2.29125 62527   109.42225       62527   36239   8.84    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC228" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read16_strand.fast5 c9aa1081-b11e-44ff-9e1a-96e129f03551    b5e83402e47ea9927694cb6e80d61180dfc8a49a        82      349.498 247.352 79435   True    108.33975       79435   139.01225       79435   11109   9.188   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC229" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch365_read672_strand.fast5       e592fb1c-47a9-4f3a-993e-fe52850fce40    b5e83402e47ea9927694cb6e80d61180dfc8a49a        365     6841.66825      33.9735 13127   True    10.99975        13127   22.97375        13127   4639    8.307   -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC230" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read166_strand.fast5       29758800-55fa-42bd-a6f5-8d1341bd79c9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     4243.9785       34.61525        15841   True    6.89325 15841   27.722  15841   11089   9.865   -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC231" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read120_strand.fast5       688733f5-5894-42b9-b18a-d123cb2e7cf3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     2690.68775      57.0705 30338   True    3.979   30338   53.0915 30338   20351   12.819  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC232" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read90_strand.fast5 f9f78647-f2b1-423d-910c-61a5adcb39a3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        81      2389.796        11.619  1936    True    8.22975 1936    3.38925 1936    1336    10.491  -0.0006</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC233" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch342_read90_strand.fast5        5641dda2-048e-4a8e-8a62-ed14c7dade9c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        342     4779.71375      351.46875       186335  True    25.38125        186335  326.0875        186335  99005   11.424  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC234" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read7_strand.fast5  d534dce2-5483-491a-a917-f729cfb9c29e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      209.25475       170.2025        85747   True    20.14375        85747   150.05875       85747   57101   12.494  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC235" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch268_read619_strand.fast5       eebfead9-bc63-4d57-974f-6cd910d72f69    b5e83402e47ea9927694cb6e80d61180dfc8a49a        268     5677.505        20.27875        2215    True    16.402  2215    3.87675 2215    677     7.139   -0.0009</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch350_read3_strand.fast5 33a3a91b-1761-47eb-835c-01061758fdf3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        350     9.3565  238.84575       128376  True    14.1875 128376  224.65825       128376  13155   10.736  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC237" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read106_strand.fast5       47bd5651-6596-472a-aaa5-d6bbb99e2ac3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     2175.90875      148.466 84439   True    0.69725 84439   147.76875       84439   53229   12.136  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC238" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch152_read48_strand.fast5        8dc57bfd-5fa4-4d50-b584-6bf448f9ccc7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        152     1683.001        17.455  1665    True    14.54075        1665    2.91425 1665    1128    11.594  -0.0011</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC239" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch480_read8_strand.fast5 0b0b8a6b-12bd-4536-bdf8-ba2e02fe2ceb    b5e83402e47ea9927694cb6e80d61180dfc8a49a        480     335.1975        130.492 9528    True    113.818 9528    16.674  9528    6451    12.462  -0.0</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC240" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch191_read8_strand.fast5 e21d3f48-c90a-4144-9c29-1de17e8497ba    b5e83402e47ea9927694cb6e80d61180dfc8a49a        191     459.5635        248.85125       123110  True    33.40775        123110  215.4435        123110  16837   9.342   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC241" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch483_read278_strand.fast5       c28729f5-d015-4d7c-aae8-26afb4f640c1    b5e83402e47ea9927694cb6e80d61180dfc8a49a        483     2447.6825       43.57275        21612   True    5.75125 21612   37.8215 21612   7641    9.247   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC242" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch284_read42_strand.fast5        7501fa9c-f1ee-4d00-b57d-7184d8719dc6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        284     492.67275       133.463 62046   True    24.881  62046   108.582 62046   35896   10.594  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC243" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch388_read218_strand.fast5       816d3f11-fa6c-4935-a754-58fdf31dc3d4    b5e83402e47ea9927694cb6e80d61180dfc8a49a        388     1853.57375      85.16925        34572   True    24.66675        34572   60.5025 34572   18187   7.731   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC244" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch22_read554_strand.fast5        eed0a901-5564-481c-8c40-90732e3522ad    b5e83402e47ea9927694cb6e80d61180dfc8a49a        22      4928.552        18.80525        895     True    17.23825        895     1.567   895     530     9.233   -0.0007</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC245" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch162_read77_strand.fast5        b720c7a4-0909-4034-a503-7d38791975fb    b5e83402e47ea9927694cb6e80d61180dfc8a49a        162     4620.055        133.91575       67381   True    15.998  67381   117.91775       67381   41207   8.439   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC246" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch365_read66_strand.fast5        b714057d-f6da-422b-855e-b9708585e4b3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        365     555.5755        322.878 183944  True    0.97525 183944  321.90275       183944  96214   9.352   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC247" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch504_read172_strand.fast5       4f225595-11d6-400b-8b41-b5ee2b228bcf    b5e83402e47ea9927694cb6e80d61180dfc8a49a        504     6759.7265       90.67475        30688   True    36.97075        30688   53.704  30688   20651   11.692  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC248" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read158_strand.fast5        e523f670-84dc-49f2-9f9a-b02cb9ec68cc    b5e83402e47ea9927694cb6e80d61180dfc8a49a        82      5894.14275      67.852  20664   True    31.68875        20664   36.16325        20664   9980    11.126  -0.0003</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC249" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch467_read479_strand.fast5       3e820fea-d7cd-4b0f-85ab-7b438b0ac78c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        467     3938.909        49.80575        18665   True    17.142  18665   32.66375        18665   11136   7.83    -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC250" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read66_strand.fast5 9b53af0e-8c1e-4300-8dc8-a3b813b8c106    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      1976.77125      13.194  662     True    12.0345 662     1.1595  662     469     12.558  -0.0024</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC251" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read92_strand.fast5 c957fcd6-8543-46f8-af4d-29b9675c79dd    b5e83402e47ea9927694cb6e80d61180dfc8a49a        82      3356.126        51.53075        2788    True    46.6505 2788    4.88025 2788    1901    11.602  -0.0006</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC252" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch416_read127_strand.fast5       5acef456-5cde-42e6-be1a-12a8e5f0d9f4    b5e83402e47ea9927694cb6e80d61180dfc8a49a        416     6542.0965       623.524 338550  True    31.06   338550  592.464 338550  66607   7.058   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC253" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read247_strand.fast5       5759fe3d-6fb8-4c7f-8a2d-ba7b9e9b6d3e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     6442.7345       98.46625        48078   True    14.329  48078   84.13725        48078   18651   12.154  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC254" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch101_read13_strand.fast5        d8bb635f-78ee-48b9-a68b-3c069fc31b24    b5e83402e47ea9927694cb6e80d61180dfc8a49a        101     478.04425       77.1015 37998   True    10.605  37998   66.4965 37998   13338   10.323  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="255" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC255" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read219_strand.fast5        9bfa7868-bfa6-489f-9fc7-214107545887    b5e83402e47ea9927694cb6e80d61180dfc8a49a        81      6691.8755       48.7175 2220    True    44.832  2220    3.8855  2220    1510    9.423   -0.0011</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC256" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch383_read27_strand.fast5        f7416ac8-5822-44e5-93a5-95c910e45c74    b5e83402e47ea9927694cb6e80d61180dfc8a49a        383     766.7905        182.19225       54986   True    85.966  54986   96.22625        54986   16856   10.473  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC257" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch137_read107_strand.fast5       a32b383d-7565-46e5-86be-5673b30cb7f7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        137     4844.84325      162.366 51525   True    72.196  51525   90.17   51525   35597   8.833   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC258" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch494_read40_strand.fast5        dbb1e951-ba5f-4278-992c-58e9bf361de0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        494     3747.54 96.834  1061    True    94.97575        1061    1.85825 1061    614     7.689   -0.001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC259" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch99_read23_strand.fast5 1b3d98d0-cf63-4c56-8e56-2400a984c91a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        99      1288.26125      8.841   4455    True    1.04475 4455    7.79625 4455    3005    12.022  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC260" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch99_read7_strand.fast5  a414cb63-d548-4aaa-b4b3-cf33195f24aa    b5e83402e47ea9927694cb6e80d61180dfc8a49a        99      126.36  275.4125        147774  True    16.80725        147774  258.60525       147774  79757   10.412  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC261" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch389_read600_strand.fast5       5d9cca03-d9ad-4966-8fc0-b295bd796558    b5e83402e47ea9927694cb6e80d61180dfc8a49a        389     5273.71 189.685 103340  True    8.839   103340  180.846 103340  59031   8.22    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC262" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch503_read69_strand.fast5        80c9f5c1-11f3-401c-aaaf-cd2a8d003192    b5e83402e47ea9927694cb6e80d61180dfc8a49a        503     2346.44275      319.93025       154097  True    50.26   154097  269.67025       154097  68479   8.051   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC263" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch1_read35_strand.fast5  3da102da-9d63-4015-a52a-127d39ebc897    b5e83402e47ea9927694cb6e80d61180dfc8a49a        1       2477.38975      400.346 221175  True    13.28975        221175  387.05625       221175  118226  11.659  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC264" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch1_read100_strand.fast5 10203711-6d73-4a26-a193-94e1f72ae744    b5e83402e47ea9927694cb6e80d61180dfc8a49a        1       5252.136        137.329 67536   True    19.141  67536   118.188 67536   9423    8.67    -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC265" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch75_read550_strand.fast5        e3ae2c01-1833-4808-bfad-ec5ee66d233d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        75      4908.17675      390.417 223014  True    0.14125 223014  390.27575       223014  86065   7.568   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC266" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch408_read490_strand.fast5       d4b78a5b-ae7c-4c22-b789-f0cd995ea0c6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        408     4753.97075      261.23025       142265  True    12.2665 142265  248.96375       142265  74483   7.958   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC267" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read19_strand.fast5        16a8b87b-971d-401a-ada3-009be8315dc5    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     690.87325       55.3685 22179   True    16.55525        22179   38.81325        22179   5315    10.207  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC268" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch509_read92_strand.fast5        730e15df-c52d-4a9f-9b15-93f79cb068bb    b5e83402e47ea9927694cb6e80d61180dfc8a49a        509     5485.62975      124.28025       8772    True    108.92775       8772    15.3525 8772    212     12.185  -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC269" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch244_read76_strand.fast5        d76022cb-35f9-4a85-9b9a-e2175423469f    b5e83402e47ea9927694cb6e80d61180dfc8a49a        244     4283.2985       379.7095        210027  True    12.16175        210027  367.54775       210027  133424  10.426  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC270" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch504_read10_strand.fast5        8cbc7d86-c7b0-473c-a8a9-1a85f8b5cc35    b5e83402e47ea9927694cb6e80d61180dfc8a49a        504     123.47375       447.945 239313  True    29.147  239313  418.798 239313  105463  12.097  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC271" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read78_strand.fast5 18cd2f91-9ef7-4e0f-b329-a0d40ba437a2    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      2116.218        266.357 110762  True    72.5235 110762  193.8335        110762  71310   9.916   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC272" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read210_strand.fast5       9fd49527-fc2e-4da8-983a-bb87a7343951    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     5569.546        40.361  3269    True    34.63975        3269    5.72125 3269    1984    11.751  -0.0005</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC273" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch82_read22_strand.fast5 f3cc93ea-d056-43d5-8d22-822175afdb30    b5e83402e47ea9927694cb6e80d61180dfc8a49a        82      602.11675       145.725 77647   True    9.842   77647   135.883 77647   6852    10.156  -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC274" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read75_strand.fast5        2f65f763-113f-4180-bcc1-d4b2a8f0dcab    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     2761.85625      565.6995        277581  True    79.93175        277581  485.76775       277581  135616  9.821   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC275" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch217_read2_strand.fast5 09dbea23-eb16-40d4-9ac2-92e96b8492c0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        217     6.86425 101.35525       47619   True    18.0205 47619   83.33475        47619   32203   10.993  -0.0001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC276" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch99_read156_strand.fast5        0eb92b75-4086-4166-b3c9-7cd3ff43b75e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        99      6846.8845       219.10675       119680  True    9.66625 119680  209.4405        119680  72380   9.805   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC277" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read176_strand.fast5       78e05ee0-b047-448c-937f-90026b743e10    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     4506.39225      247.42425       141385  True    0.0     141385  247.42425       141385  72577   11.942  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC278" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch450_read36_strand.fast5        4e42810a-06a5-4f94-9371-7fe42d3abdf3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        450     2720.183        100.7285        49807   True    13.56625        49807   87.16225        49807   27867   9.067   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC279" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read13_strand.fast5        609fe3a0-fe53-4008-bb6f-ed40182770ad    b5e83402e47ea9927694cb6e80d61180dfc8a49a        212     196.81125       106.97575       27360   True    59.09575        27360   47.88   27360   4082    7.585   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC280" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch230_read85_strand.fast5        a921cc1b-5eca-402a-b51f-64e82380570e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        230     2205.30675      123.801 70743   True    0.0     70743   123.801 70743   40867   7.442   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC281" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read15_strand.fast5        354d42d3-662e-4684-aa91-c7f625e011d1    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     377.872 55.3325 14869   True    29.31025        14869   26.02225        14869   6628    7.339   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC282" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read130_strand.fast5       bf8c318e-6c16-49f4-8ba4-b431d5c7cf48    b5e83402e47ea9927694cb6e80d61180dfc8a49a        355     4506.4005       113.64325       63152   True    3.1265  63152   110.51675       63152   26471   8.557   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC283" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read46_strand.fast5        1dcf620a-c5d2-41ed-bf45-d9277d96bcb4    b5e83402e47ea9927694cb6e80d61180dfc8a49a        212     1210.00725      16.03975        2548    True    11.58025        2548    4.4595  2548    1803    10.795  -0.0006</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC284" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch101_read85_strand.fast5        63c93be2-7e8b-4879-a90c-10d9b837c98f    b5e83402e47ea9927694cb6e80d61180dfc8a49a        101     3356.12625      88.67225        33103   True    30.74175        33103   57.9305 33103   21359   11.696  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC285" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch483_read224_strand.fast5       4ea16c7c-be07-4fd8-a2dd-d66ac699372a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        483     1961.2755       54.94975        16196   True    26.6055 16196   28.34425        16196   10467   10.299  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC286" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch427_read68_strand.fast5        a27abfe0-4b70-40b9-b838-5470424b15a9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        427     2950.68675      377.995 196018  True    34.962  196018  343.033 196018  22179   9.289   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC287" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch101_read120_strand.fast5       d98c2fc9-0bf9-4767-a693-694a73c60017    b5e83402e47ea9927694cb6e80d61180dfc8a49a        101     4537.366        82.67775        35489   True    20.5705 35489   62.10725        35489   20822   9.042   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC288" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch373_read156_strand.fast5       ae79a129-1952-4604-aafc-be68c929b9db    b5e83402e47ea9927694cb6e80d61180dfc8a49a        373     6352.1365       179.16825       68157   True    59.89325        68157   119.275 68157   9390    9.331   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC289" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read45_strand.fast5        56a76943-f031-4bf0-b10e-ba9dcb354e37    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     1699.028        161.95125       91986   True    0.9745  91986   160.97675       91986   54116   10.286  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC290" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read105_strand.fast5       1933a17b-e943-4472-8148-9923327dc1e0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        212     5351.7025       346.08125       169718  True    49.0745 169718  297.00675       169718  45036   10.302  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC291" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch131_read92_strand.fast5        dabc694c-976d-47b6-8a39-a8471055a95d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        131     921.05175       101.01875       44394   True    23.3285 44394   77.69025        44394   21396   7.911   -0.0002</span>

</pre>

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<pre style="margin: 0;">+<span id="LC292" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch455_read226_strand.fast5       55dd6a97-2ace-4b78-a678-c51150f746a6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        455     1847.13975      30.47425        553     True    29.50575        553     0.9685  553     380     10.126  -0.0019</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC293" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch173_read261_strand.fast5       b6496754-1e8d-4790-a15c-345c419070d2    b5e83402e47ea9927694cb6e80d61180dfc8a49a        173     2581.127        8.9115  776     True    7.552   776     1.3595  776     511     8.384   -0.0019</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC294" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch321_read28_strand.fast5        34756f52-05c7-4163-8162-c9a82a6bdcfa    b5e83402e47ea9927694cb6e80d61180dfc8a49a        321     1048.31775      336.04025       161398  True    53.59225        161398  282.448 161398  88479   9.892   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

295

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<pre style="margin: 0;">+<span id="LC295" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch244_read42_strand.fast5        ba2e48f8-5a6f-4909-b54d-b9b203fb8b96    b5e83402e47ea9927694cb6e80d61180dfc8a49a        244     3092.9185       111.41825       45353   True    32.04925        45353   79.369  45353   13781   8.349   -0.0002</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC296" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch341_read17_strand.fast5        a3c1d14d-16b3-4d7c-a2d4-4e240732d205    b5e83402e47ea9927694cb6e80d61180dfc8a49a        341     1293.48075      75.98225        40685   True    4.78275 40685   71.1995 40685   10621   9.307   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

297

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<pre style="margin: 0;">+<span id="LC297" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch341_read29_strand.fast5        66fe8815-4b05-4531-96fe-a21aa9d8048d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        341     1521.0015       335.60575       76534   True    201.66975       76534   133.936 76534   15094   7.851   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC298" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch413_read298_strand.fast5       5f0bc985-cb0c-449d-9b64-92363c80f6d7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        413     2529.1185       45.092  16623   True    16.00025        16623   29.09175        16623   8156    7.603   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC299" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read153_strand.fast5       48d555a1-f25d-4426-9d89-f5ca6b9ba931    b5e83402e47ea9927694cb6e80d61180dfc8a49a        451     6114.259        1051.36225      538809  True    108.446 538809  942.91625       538809  320662  8.03    -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC300" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read212_strand.fast5       5ddfcdbf-c4ce-4115-a469-2a357d638664    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     5697.78375      58.0345 10146   True    40.2775 10146   17.757  10146   6914    11.577  -0.0004</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC301" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch373_read47_strand.fast5        9e773e84-c91b-47ec-acd0-6e991d2b2a4b    b5e83402e47ea9927694cb6e80d61180dfc8a49a        373     1918.82175      173.14725       88404   True    18.4395 88404   154.70775       88404   59418   9.425   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC302" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch408_read200_strand.fast5       e6394fc7-d11e-49d6-880f-9564b9d1d5dc    b5e83402e47ea9927694cb6e80d61180dfc8a49a        408     1826.848        29.759  1174    True    27.70325        1174    2.05575 1174    765     10.614  -0.0013</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC303" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read124_strand.fast5        ea975097-1db0-4ad5-afd3-5501d10c47f5    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      4662.84675      53.55   30600   True    0.0     30600   53.55   30600   20173   12.566  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC304" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch321_read32_strand.fast5        a1641908-a10b-4756-95b7-cc7825d1c7e3    b5e83402e47ea9927694cb6e80d61180dfc8a49a        321     1446.137        186.14825       106370  True    0.0     106370  186.14825       106370  59111   11.738  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC305" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch326_read6_strand.fast5 f48f7460-2313-4924-a752-4d45dd94a71b    b5e83402e47ea9927694cb6e80d61180dfc8a49a        326     268.332 84.78525        15700   True    57.3095 15700   27.47575        15700   10585   11.619  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC306" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch485_read2_strand.fast5 ef65b499-ceb0-4f63-9c9e-6e09173f425d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        485     6.864   535.94075       265751  True    70.87625        265751  465.0645        265751  116581  10.605  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC307" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch210_read74_strand.fast5        460d3c1c-2c14-4ffe-a7bd-86be47ea9ce9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        210     2684.5965       264.62725       143558  True    13.40025        143558  251.227 143558  26397   9.285   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC308" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch202_read2_strand.fast5 33db6f52-9c3e-47c6-9992-05cb7e0d271d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        202     6.86425 81.2635 42239   True    7.34525 42239   73.91825        42239   11873   12.656  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC309" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read2_strand.fast5 4b7eb4d2-f1c3-4290-92e7-7af4affed636    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     6.99    181.99325       99333   True    8.1605  99333   173.83275       99333   60395   12.218  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC310" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read156_strand.fast5        7a9fe298-3ab4-451d-9c25-12dd2df6dbda    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      6587.12775      140.62675       73245   True    12.448  73245   128.17875       73245   47651   12.279  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC311" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read264_strand.fast5       b2116e0d-6d51-444c-923d-e1a37083e1ff    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     7098.535        5.06225 2864    True    0.04975 2864    5.0125  2864    1745    10.929  -0.0005</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC312" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch342_read18_strand.fast5        1fd6eb96-3d75-4b96-8891-b1b53c6fc92d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        342     684.67075       37.14575        10685   True    18.44575        10685   18.7    10685   7290    10.717  -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC313" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch333_read118_strand.fast5       02567567-5f57-490c-827c-76b47449ddb1    b5e83402e47ea9927694cb6e80d61180dfc8a49a        333     5440.09675      199.7965        107593  True    11.50825        107593  188.28825       107593  25332   9.702   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC314" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read50_strand.fast5 fa4907ae-c93e-4180-9ce6-2f1ed7c9aacd    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      1485.45875      56.459  30995   True    2.21775 30995   54.24125        30995   21115   12.393  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC315" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch281_read184_strand.fast5       8aeb079c-08df-446c-9b09-f14db6992ba6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        281     3056.7685       28.83175        495     True    27.9645 495     0.86725 495     316     8.077   -0.0037</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC316" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch251_read49_strand.fast5        8c28f4c0-9c43-48dd-ae58-4158ea445f86    b5e83402e47ea9927694cb6e80d61180dfc8a49a        251     381.74475       28.04675        4041    True    20.9735 4041    7.07325 4041    2191    7.286   -0.0005</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC317" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch371_read41_strand.fast5        763b2359-b619-4e26-ab1a-87f2603e091f    b5e83402e47ea9927694cb6e80d61180dfc8a49a        371     1137.70325      66.988  33544   True    8.2855  33544   58.7025 33544   11985   11.744  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC318" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch258_read490_strand.fast5       cfebdd6d-33c5-4ad5-b74c-5b6e9cf5eb9c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        258     4350.68625      29.1975 5434    True    19.687  5434    9.5105  5434    2880    7.182   -0.0003</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC319" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch355_read24_strand.fast5        cecbeb6a-c7cd-44bc-a00b-0f0ecd3c9165    b5e83402e47ea9927694cb6e80d61180dfc8a49a        355     684.071 246.94225       140772  True    0.5905  140772  246.35175       140772  67193   10.331  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC320" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch134_read23_strand.fast5        2632e5f9-5c8f-40ba-b74e-7456c559eb0e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        134     1422.48025      228.043 127574  True    4.78775 127574  223.25525       127574  82145   9.034   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC321" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read34_strand.fast5        2d331d1f-7f3a-4cbb-8f2c-e6072998fcd7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     1148.11875      229.0375        95868   True    61.268  95868   167.7695        95868   57333   9.285   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC322" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch230_read60_strand.fast5        be46e670-3abe-4879-b1d0-c488436fa8d7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        230     1463.8445       157.166 77767   True    21.07275        77767   136.09325       77767   38572   7.221   -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC323" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch340_read427_strand.fast5       612d2cf0-f5d3-459a-8030-8f654e360951    b5e83402e47ea9927694cb6e80d61180dfc8a49a        340     3963.93425      76.50625        26034   True    30.9465 26034   45.55975        26034   13596   7.113   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC324" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch234_read6_strand.fast5 60b4855c-3b5c-44dd-8379-49173eac367e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        234     351.04075       94.27475        52984   True    1.55175 52984   92.723  52984   29293   9.063   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC325" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read122_strand.fast5        c0046a02-1754-40fa-9edd-144d9a7f432d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        81      3392.768        6.77925 3700    True    0.304   3700    6.47525 3700    2393    10.751  -0.0004</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC326" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch212_read27_strand.fast5        c53d0612-06d8-44a7-9212-900d025901a5    b5e83402e47ea9927694cb6e80d61180dfc8a49a        212     702.17675       25.853  4638    True    17.7365 4638    8.1165  4638    3207    10.59   -0.0004</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC327" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch373_read154_strand.fast5       0f28f839-54dc-423c-9de7-95100aede3a9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        373     6278.88775      73.21725        36952   True    8.55025 36952   64.667  36952   12029   10.374  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC328" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read58_strand.fast5        be9e7f5e-550f-493f-ac03-f92128d95353    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     1076.266        76.92775        32809   True    19.5115 32809   57.41625        32809   22241   12.444  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC329" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read141_strand.fast5       a769b59b-0f75-46db-8748-b86fc4ed8980    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     3479.291        139.7025        58992   True    36.465  58992   103.2375        58992   26098   12.508  -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

330

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<pre style="margin: 0;">+<span id="LC330" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch473_read132_strand.fast5       d6af0563-4503-4f7d-b5de-fe84cb90bf4e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        473     6278.88775      313.19975       173768  True    9.1045  173768  304.09525       173768  101333  9.223   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC331" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch210_read12_strand.fast5        9d3c483c-b5a8-4171-8f42-b0e77bcaad68    b5e83402e47ea9927694cb6e80d61180dfc8a49a        210     548.57825       77.5575 24431   True    34.80325        24431   42.75425        24431   12290   11.439  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC332" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch67_read587_strand.fast5        40312aaa-afc4-410e-ad5e-a65056ce0e0b    b5e83402e47ea9927694cb6e80d61180dfc8a49a        67      7077.13175      88.48925        39900   True    18.66425        39900   69.825  39900   10547   7.804   -0.0003</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC333" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read47_strand.fast5        3aca04b2-baef-4eca-9041-b1b939b17bec    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     1860.986        156.4985        82272   True    12.52125        82272   143.97725       82272   35421   8.909   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="334" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC334" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch244_read36_strand.fast5        e59e6534-0067-4c08-9ed7-90a054e0445e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        244     2126.59675      692.308 387633  True    13.949  387633  678.359 387633  221901  9.982   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC335" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch438_read61_strand.fast5        0c0530c0-39d8-46a7-a5cb-56962c2f5030    b5e83402e47ea9927694cb6e80d61180dfc8a49a        438     3356.126        89.114  50922   True    0.0     50922   89.114  50922   34063   10.5    -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC336" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch1_read105_strand.fast5 4cf65ff6-d050-439b-b39d-52edf54ef61a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        1       5418.28825      189.30925       74021   True    59.77225        74021   129.537 74021   44625   10.006  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC337" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch99_read67_strand.fast5 fade0c88-de4a-406e-a2b2-e9f3624cc260    b5e83402e47ea9927694cb6e80d61180dfc8a49a        99      2735.109        156.24275       35472   True    94.166  35472   62.07675        35472   23283   10.727  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC338" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch453_read454_strand.fast5       177ed8c4-d22d-4fab-a0db-0dfadc6a6def    b5e83402e47ea9927694cb6e80d61180dfc8a49a        453     3655.22475      28.238  4746    True    19.93225        4746    8.30575 4746    2726    7.334   -0.0004</span>

</pre>

</td>

</tr>

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</td>

<td class="diff-line-num new new_line" data-linenumber="339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC339" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch222_read42_strand.fast5        ed15c7df-0741-4aac-a29e-dc8085fbe00d    b5e83402e47ea9927694cb6e80d61180dfc8a49a        222     2116.21775      93.86625        40396   True    23.17325        40396   70.693  40396   18655   9.487   -0.0003</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="340" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC340" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch162_read6_strand.fast5 9dbf286e-ab09-4d41-bca5-595bbf699680    b5e83402e47ea9927694cb6e80d61180dfc8a49a        162     222.2855        636.86375       358800  True    8.96375 358800  627.9   358800  226843  9.142   -0.0002</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="341" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC341" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch371_read193_strand.fast5       50eaa9e0-c6ab-437b-8f9f-409adfd74e3e    b5e83402e47ea9927694cb6e80d61180dfc8a49a        371     2394.9865       28.852  11699   True    8.378   11699   20.474  11699   7901    11.421  -0.0004</span>

</pre>

</td>

</tr>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="342" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC342" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read17_strand.fast5        a855b193-5d40-4f76-bc1e-4860445c00ff    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     643.713 47.149  18431   True    14.8945 18431   32.2545 18431   12868   10.57   -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC343" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch227_read127_strand.fast5       f861636e-24f0-4fed-b055-2ea1601ff7a9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        227     1070.111        39.85275        15983   True    11.8825 15983   27.97025        15983   9859    8.301   -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="344" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC344" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch281_read45_strand.fast5        1b7c684e-5818-4a84-bc41-fb0a2a6c09c6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        281     719.727 16.037  6681    True    4.34425 6681    11.69275        6681    3672    10.052  -0.0001</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="345" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC345" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read9_strand.fast5  ef225f6c-8d40-4379-bb30-78528bc7a614    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      379.46175       261.19475       146956  True    4.02125 146956  257.1735        146956  97730   12.778  -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC346" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch1_read18_strand.fast5  c4067b38-9230-47f6-8067-8523a4cd6943    b5e83402e47ea9927694cb6e80d61180dfc8a49a        1       913.9115        176.212 100692  True    0.0     100692  176.212 100692  61083   10.865  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="347" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC347" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch410_read2_strand.fast5 55b4e969-8678-4879-b0aa-b6c68588ebe0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        410     6.86575 177.971 77859   True    41.7165 77859   136.2545        77859   52263   11.529  -0.0001</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC348" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read52_strand.fast5 becc4d21-cd46-4d44-91e7-163ffe82effc    b5e83402e47ea9927694cb6e80d61180dfc8a49a        81      1464.2685       75.085  42905   True    0.0     42905   75.085  42905   29436   10.618  -0.0002</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC349" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch202_read37_strand.fast5        0f34150b-70ef-460f-9462-53d0467bb850    b5e83402e47ea9927694cb6e80d61180dfc8a49a        202     978.22375       702.64025       397442  True    7.11525 397442  695.525 397442  195020  11.005  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="350" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC350" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch438_read18_strand.fast5        72926f1a-9fef-45ae-bd2e-ee16ba20f021    b5e83402e47ea9927694cb6e80d61180dfc8a49a        438     638.27175       54.7345 23882   True    12.94025        23882   41.79425        23882   14317   10.854  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC351" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch244_read57_strand.fast5        bb821a5b-d052-4e42-8fea-79c27ac72eb6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        244     3365.31525      79.483  38483   True    12.13775        38483   67.34525        38483   9920    8.203   -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC352" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch117_read278_strand.fast5       53f8170a-e522-4d52-bbd8-134631af065f    b5e83402e47ea9927694cb6e80d61180dfc8a49a        117     5939.2075       28.77325        953     True    27.105  953     1.66825 953     652     7.612   -0.0021</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="353" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC353" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read37_strand.fast5        b306e42b-beba-4abd-8450-c66d72deb5d6    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     750.70275       130.9815        73487   True    2.379   73487   128.6025        73487   50079   12.389  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="354" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC354" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch450_read19_strand.fast5        a03993f5-af1f-417a-a161-c2a1aeba6dc0    b5e83402e47ea9927694cb6e80d61180dfc8a49a        450     1837.22875      32.55   13234   True    9.38975 13234   23.16025        13234   8460    9.654   -0.0002</span>

</pre>

</td>

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</td>

<td class="diff-line-num new new_line" data-linenumber="355" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

355

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC355" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch466_read27_strand.fast5        227d640b-ce35-4f54-899a-053be7aaf453    b5e83402e47ea9927694cb6e80d61180dfc8a49a        466     1262.27875      334.78875       124541  True    116.8405        124541  217.94825       124541  40121   10.992  -0.0002</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="356" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

356

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC356" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch41_read17_strand.fast5 797358c0-3c2b-445d-90dc-23fc03773c5c    b5e83402e47ea9927694cb6e80d61180dfc8a49a        41      796.35  108.718 45964   True    28.28025        45964   80.43775        45964   30232   12.612  -0.0002</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="357" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC357" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch427_read82_strand.fast5        b6297b04-d06c-49fd-a638-12fd7c651d38    b5e83402e47ea9927694cb6e80d61180dfc8a49a        427     3985.45375      29.71125        9654    True    12.816  9654    16.89525        9654    2117    9.689   -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="358" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC358" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read168_strand.fast5       31969e9e-3eef-43f4-a191-bf21461cecd7    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     4278.60525      96.5135 36857   True    32.013  36857   64.5005 36857   17307   11.211  -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="359" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC359" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch124_read84_strand.fast5        93556a18-3105-46a9-b5f5-97b5c39bf009    b5e83402e47ea9927694cb6e80d61180dfc8a49a        124     1936.194        42.8865 19680   True    8.4455  19680   34.441  19680   13629   12.207  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="360" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC360" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch134_read99_strand.fast5        f7fadf30-8f49-43fa-8d0f-d03cd1008014    b5e83402e47ea9927694cb6e80d61180dfc8a49a        134     5697.78375      183.7215        104749  True    0.40925 104749  183.31225       104749  60639   7.597   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="361" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC361" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch172_read116_strand.fast5       cdb1a77a-27c2-40da-b92a-62ceb4db13a8    b5e83402e47ea9927694cb6e80d61180dfc8a49a        172     4790.1415       183.90375       97566   True    13.16175        97566   170.742 97566   46598   10.576  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC362" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch341_read61_strand.fast5        ccf38b85-bb53-4034-b7c7-284438099fd9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        341     3966.80075      139.2955        47170   True    56.74675        47170   82.54875        47170   28621   8.747   -0.0001</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="363" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC363" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch344_read110_strand.fast5       2120bbb3-a266-4568-8f84-8be826cbe238    b5e83402e47ea9927694cb6e80d61180dfc8a49a        344     3996.12375      379.86025       111616  True    184.53125       111616  195.329 111616  72669   11.733  -0.0001</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC364" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch198_read335_strand.fast5       d9e8ec01-a31a-453c-af80-24460db627c9    b5e83402e47ea9927694cb6e80d61180dfc8a49a        198     3419.03875      127.0045        57451   True    26.4645 57451   100.54  57451   36836   11.185  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC365" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch485_read113_strand.fast5       7f8e3595-8dd0-4289-9f2a-8a114c091876    b5e83402e47ea9927694cb6e80d61180dfc8a49a        485     4269.23925      28.715  986     True    26.98825        986     1.72675 986     674     12.45   -0.001</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="366" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC366" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch373_read20_strand.fast5        8e2a24e3-7544-415e-9a54-4d9a10cc51eb    b5e83402e47ea9927694cb6e80d61180dfc8a49a        373     571.1535        284.28875       158338  True    7.19675 158338  277.092 158338  87144   11.372  -0.0002</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC367" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch396_read701_strand.fast5       04e2b985-8c2b-4a97-a9e2-80030ddabfc1    b5e83402e47ea9927694cb6e80d61180dfc8a49a        396     6805.54525      105.43925       53548   True    11.73   53548   93.70925        53548   12918   8.543   -0.0002</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="368" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC368" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch81_read101_strand.fast5        34879fda-f781-475c-8747-5e1b22f95f21    b5e83402e47ea9927694cb6e80d61180dfc8a49a        81      2689.99175      173.02925       96370   True    4.3805  96370   168.64875       96370   65456   10.347  -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="369" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

369

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<pre style="margin: 0;">+<span id="LC369" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch451_read62_strand.fast5        3d9d01cc-7e74-44ef-86b2-48552514f851    b5e83402e47ea9927694cb6e80d61180dfc8a49a        451     2840.72575      142.27525       66740   True    25.479  66740   116.79625       66740   24111   8.087   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="370" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

370

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<pre style="margin: 0;">+<span id="LC370" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch283_read106_strand.fast5       ad989cd2-0408-45b6-b8d5-ae456180c90a    b5e83402e47ea9927694cb6e80d61180dfc8a49a        283     5026.3605       611.76225       341340  True    14.41625        341340  597.346 341340  137822  7.035   -0.0002</span>

</pre>

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</td>

<td class="diff-line-num new new_line" data-linenumber="371" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

371

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<pre style="margin: 0;">+<span id="LC371" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch210_read94_strand.fast5        0112c3a2-1cea-4788-837c-1004f544d283    b5e83402e47ea9927694cb6e80d61180dfc8a49a        210     3455.443        1474.272        837665  True    8.35725 837665  1465.91475      837665  341725  11.846  -0.0002</span>

</pre>

</td>

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<td class="diff-line-num new new_line" data-linenumber="372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

372

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<pre style="margin: 0;">+<span id="LC372" class="line" lang="plaintext">nanopore2_20170302_FNFAF09967_MN17024_sequencing_run_170301_MG1655_PC_RAD002_87615_ch31_read14_strand.fast5 71bcbd58-47c9-479b-b47f-d5c254f7ad53    b5e83402e47ea9927694cb6e80d61180dfc8a49a        31      1014.14725      1102.06475      622247  True    13.13125        622247  1088.9335       622247  393431  10.573  -0.0002</span></pre>

</td>

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</table>

<br>

</li>

<li id="4576f2477f20d8168b8e45dc0b67ad6b5f437a90">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#4576f2477f20d8168b8e45dc0b67ad6b5f437a90"><strong>debian/python3-nanoget-examples.install</strong></a>

<hr>

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</td>

<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

1

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="nx">debian</span><span class="o" style="font-weight: 600;">/</span><span class="nx">missing</span><span class="o" style="font-weight: 600;">-</span><span class="nx">source</span><span class="o" style="font-weight: 600;">/</span><span class="nx">nanotest</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">doc</span><span class="o" style="font-weight: 600;">/</span><span class="nx">python3</span><span class="o" style="font-weight: 600;">-</span><span class="nx">nanoget</span><span class="o" style="font-weight: 600;">/</span><span class="nx">examples</span></span></pre>

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</table>

<br>

</li>

<li id="a845fd45d1f15299e50b928f83edfb28d37b2a04">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#a845fd45d1f15299e50b928f83edfb28d37b2a04"><strong>debian/python3-nanoget.install</strong></a>

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</td>

<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

1

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="c1" style="color: #998; font-style: italic;"># usr</span></span></pre>

</td>

</tr>

</table>

<br>

</li>

<li id="8756c63497c8dc39f7773438edf53b220c773f67">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>

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1

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<td class="diff-line-num new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">#!/usr/bin/make -f</span>

</pre>

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2

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<td class="diff-line-num new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

2

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"># DH_VERBOSE := 1</span>

</pre>

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4

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<td class="diff-line-num new_line old" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">export LC_ALL=C.UTF-8</span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

4

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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

6

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">include /usr/share/dpkg/default.mk</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

7

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"># this provides:</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

8

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"># DEB_SOURCE: the source package name</span>

</pre>

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9

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"># DEB_VERSION: the full version of the package (epoch + upstream vers. + revision)</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

10

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"># DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

11

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<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"># DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch</span>

</pre>

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</tr>

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<td class="diff-line-num old old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

12

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"># DEB_VERSION_UPSTREAM: the package's upstream version</span>

</pre>

</td>

</tr>

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<td class="diff-line-num old old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

13

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"># DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

14

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"># SOURCE_DATE_EPOCH: the source release date as seconds since the epoch, as</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

15

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">#                    specified by <https://reproducible-builds.org/specs/source-date-epoch/></span>

</pre>

</td>

</tr>

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<td class="diff-line-num old old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

16

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"></span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

17

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"># for hardening you might like to uncomment this:</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

18

</td>

<td class="diff-line-num new_line old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"># export DEB_BUILD_MAINT_OPTIONS=hardening=+all</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

5

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">export PYBUILD_NAME=nanoget</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

19

</td>

<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

20

</td>

<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">%:</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

21

</td>

<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">      dh $@ --with python3 --buildsystem=pybuild</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

22

</td>

<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

23

</td>

<td class="diff-line-num new_line old" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext">### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

10

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">override_dh_installexamples:</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

11

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">     dh_installexamples</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

12

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">     mv `find debian/python3-$(PYBUILD_NAME) -name test.py` debian/python3-$(PYBUILD_NAME)-examples/usr/share/doc/python3-$(PYBUILD_NAME)/examples</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

13

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">     find debian -name __pycache__ -type d | xargs rm -rf</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

14

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext">     find debian -name scripts -type d -empty | xargs rmdir</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

15

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

24

</td>

<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

16

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">#override_dh_auto_test:</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

25

</td>

<td class="diff-line-num new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

17

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))</span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

26

</td>

<td class="diff-line-num new_line old" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext">#    <span class="idiff left right">do_stuff_for_testing</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

18

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext">#    <span class="idiff left right">PYTHONPATH=$(shell pybuild --print build_dir --interpreter python3) python3 scripts/test.py | true</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

27

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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

19

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">#endif</span></pre>

</td>

</tr>

</table>

<br>

</li>

<li id="d0b2adb0358f0eab7dd3bb1849dd4e795a81f242">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#d0b2adb0358f0eab7dd3bb1849dd4e795a81f242"><strong>debian/source/include-binaries</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

1

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">debian/missing-source/nanotest/alignment.bam</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

2

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">debian/missing-source/nanotest/alignment.bam.bai_orig</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

3

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">debian/missing-source/nanotest/reads.fa.gz</span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">debian/missing-source/nanotest/reads.fastq.gz</span></pre>

</td>

</tr>

</table>

<br>

</li>

<li id="8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">

<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/1f088309c78e0056868b741d7113668bf31690c0...af8488974d0488df82f007be0e099474d8c531b7#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

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<td class="diff-line-num old_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

</td>

<td class="diff-line-num new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC1" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;">#!/bin/bash</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

2

</td>

<td class="diff-line-num new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

2

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC2" class="line" lang="shell"><span class="nb" style="color: #0086b3;">set</span> <span class="nt" style="color: #000080;">-e</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

</td>

<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC3" class="line" lang="shell"></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

4

</td>

<td class="diff-line-num new_line old" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC4" class="line" lang="shell"><span class="nv" style="color: #008080;">pkg</span><span class="o" style="font-weight: 600;">=</span><span class="c" style="color: #998; font-style: italic;"><span class="idiff left right">#PACKAGENAME#</span></span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="shell"><span class="nv" style="color: #008080;">pkg</span><span class="o" style="font-weight: 600;">=</span><span class="idiff left right">python3-nanoget</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

</td>

<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC5" class="line" lang="shell"></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

</td>

<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC6" class="line" lang="shell"><span class="nb" style="color: #0086b3;">export </span><span class="nv" style="color: #008080;">LC_ALL</span><span class="o" style="font-weight: 600;">=</span>C.UTF-8</span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

</td>

<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC7" class="line" lang="shell"><span class="k" style="font-weight: 600;">if</span> <span class="o" style="font-weight: 600;">[</span> <span class="s2" style="color: #d14;">"</span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="s2" style="color: #d14;">"</span> <span class="o" style="font-weight: 600;">=</span> <span class="s2" style="color: #d14;">""</span> <span class="o" style="font-weight: 600;">]</span> <span class="p">;</span> <span class="k" style="font-weight: 600;">then</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

</td>

<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC8" class="line" lang="shell"><span class="k" style="font-weight: 600;">  </span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="o" style="font-weight: 600;">=</span><span class="si" style="color: #d14;">$(</span><span class="nb" style="color: #0086b3;">mktemp</span> <span class="nt" style="color: #000080;">-d</span> /tmp/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}</span><span class="nt" style="color: #000080;">-test</span>.XXXXXX<span class="si" style="color: #d14;">)</span></span>

</pre>

</td>

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<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

9

</td>

<td class="diff-line-num new_line old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC9" class="line" lang="shell">  <span class="c" style="color: #998; font-style: italic;"># Double quote below to expand the temporary directory variable now versus</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

10

</td>

<td class="diff-line-num new_line old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

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<pre style="margin: 0;">-<span id="LC10" class="line" lang="shell">  <span class="c" style="color: #998; font-style: italic;"># later is on purpose.</span></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

11

</td>

<td class="diff-line-num new_line old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC11" class="line" lang="shell">  <span class="c" style="color: #998; font-style: italic;"># shellcheck disable=SC2064</span></span>

</pre>

</td>

</tr>

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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

12

</td>

<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC9" class="line" lang="shell">  <span class="nb" style="color: #0086b3;">trap</span> <span class="s2" style="color: #d14;">"rm -rf </span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="s2" style="color: #d14;">"</span> 0 INT QUIT ABRT PIPE TERM</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

13

</td>

<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

10

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC10" class="line" lang="shell"><span class="k" style="font-weight: 600;">fi</span></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

14

</td>

<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

11

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC11" class="line" lang="shell"></span>

</pre>

</td>

</tr>

<tr class="line_holder match" id="" style="line-height: 1.6;">

<td class="diff-line-num unfold js-unfold old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,4 +13,13 @@ cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

16

</td>

<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

13

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC13" class="line" lang="shell"></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

17

</td>

<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

14

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC14" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cd</span> <span class="s2" style="color: #d14;">"</span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="s2" style="color: #d14;">"</span></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

18

</td>

<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

15

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC15" class="line" lang="shell"></span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

19

</td>

<td class="diff-line-num new_line old" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC19" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;">#do_stuff_to_test_package#</span></span></pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

16

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC16" class="line" lang="shell"><span class="nb" style="color: #0086b3;">gunzip </span>nanotest/[as]<span class="k" style="font-weight: 600;">*</span>.gz</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

17

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC17" class="line" lang="shell"></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

18

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC18" class="line" lang="shell">python3 test.py</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

19

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC19" class="line" lang="shell"></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

20

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC20" class="line" lang="shell"><span class="k" style="font-weight: 600;">if </span>diff nanotest/alignment.bam.bai_orig nanotest/alignment.bam.bai <span class="p">;</span> <span class="k" style="font-weight: 600;">then</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

21

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC21" class="line" lang="shell"><span class="k" style="font-weight: 600;">    </span><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"Pass"</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

22

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC22" class="line" lang="shell"><span class="k" style="font-weight: 600;">else</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

23

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC23" class="line" lang="shell"><span class="k" style="font-weight: 600;">    </span><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"Fail"</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

24

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC24" class="line" lang="shell">    <span class="nb" style="color: #0086b3;">exit </span>1</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

25

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC25" class="line" lang="shell"><span class="k" style="font-weight: 600;">fi</span></span></pre>

</td>

</tr>

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