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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1017d619b350d2986ea753d57989d7f77eca7dfb">1017d619</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-27T13:45:14+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1017d619b350d2986ea753d57989d7f77eca7dfb#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 27 Apr 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 27 Apr 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   |     Tasks                                           |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    17<span class="idiff left right">1</span> | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |     9<span class="idiff left right">3</span> | {covid-19,practice,imaging}                         | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">6</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi                   |     3<span class="idiff left right">9</span> | {laboratory,practice,imaging,covid-19,his,oncology} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    17<span class="idiff left right">3</span> | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |     9<span class="idiff left right">4</span> | {covid-19,practice,imaging}                         | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">5</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi                   |     3<span class="idiff left right">8</span> | {laboratory,practice,imaging,covid-19,his,oncology} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> dicomscope                    |     32 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools                   |     31 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> amide                         |     30 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> htsjdk                        |     29 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dcm2niix                      |     28 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> gdcm                          |     28 | {imaging,covid-19}                                  | </span>
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<td class="diff-line-num new_line old" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gnumed-server                 |     19 | {covid-19,practice}                                 | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> htsjdk                        |     30 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> dcm2niix                      |     29 | {imaging}                                           | </span>
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<td class="diff-line-num new old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> gdcm                          |     29 | {imaging,covid-19}                                  | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> openslide                     |     19 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> gnumed-server                 |     18 | {covid-19,practice}                                 | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> pixelmed                      |     18 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> king                          |     17 | {typesetting,imaging}                               | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> minc-tools                    |     17 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> plastimatch                   |     17 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> hunspell-en-med               |     16 | {tools}                                             | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> invesalius                    |     16 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> ngs-sdk                       |     16 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> plastimatch                   |     16 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> adun.app                      |     14 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> biosig4c++                    |     14 | {imaging,physics}                                   | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> vtk-dicom                     |     14 | {imaging}                                           | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,41 +27,44 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> gasic                         |     11 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> obitools                      |     11 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> gdcm                          |     10 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> insighttoolkit4               |     10 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> jebl2                         |     10 | {bio-dev}                                           | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> mipe                          |      9 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> ncbi-entrez-direct            |      9 | {bio}                                               | </span>
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<td class="diff-line-num new_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> ngs-sdk                       |      9 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> parsnp                        |      9 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> tree-puzzle                   |      9 | {bio-phylogeny,cloud,bio}                           | </span>
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<td class="diff-line-num new new_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> ampliconnoise                 |      8 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> biojava-live                  |      8 | {bio-dev}                                           | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> ea-utils                      |      8 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> fitgcp                        |      8 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext"> ampliconnoise                 |      7 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> insighttoolkit4               |      8 | {imaging-dev}                                       | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> melting                       |      8 | {bio,cloud}                                         | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> cgview                        |      7 | {bio}                                               | </span>
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<td class="diff-line-num new new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> embassy-domainatrix           |      7 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> fastlink                      |      7 | {bio,cloud}                                         | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> jaligner                      |      7 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> librg-utils-perl              |      7 | {bio}                                               | </span>
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<td class="diff-line-num new_line old" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> melting                       |      7 | {bio,cloud}                                         | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> paml                          |      7 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> staden                        |      7 | {bio}                                               | </span>
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<td class="diff-line-num old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
49
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<td class="diff-line-num new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
49
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> alter-sequence-alignment      |      6 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> anfo                          |      6 | {bio,cloud}                                         | </span>
</pre>
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50
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<td class="diff-line-num new_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> arden                         |      6 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
51
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<td class="diff-line-num new_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
52
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> biomaj3-cli                   |      6 | {cloud}                                             | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
53
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> bppsuite                      |      6 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> cluster3                      |      6 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> codonw                        |      6 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> dazzdb                        |      6 | {bio}                                               | </span>
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<td class="diff-line-num new_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> diamond-aligner               |      6 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> ecopcr                        |      6 | {bio}                                               | </span>
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<td class="diff-line-num old_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> edtsurf                       |      6 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num new_line old" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> embassy-domainatrix           |      6 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> embassy-domalign              |      6 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> embassy-domsearch             |      6 | {bio,cloud}                                         | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> freebayes                     |      6 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="62" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> freecontact                   |      6 | {cloud,bio}                                         | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> indelible                     |      6 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> king-probe                    |      6 | {bio}                                               | </span>
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<td class="diff-line-num new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> libminc                       |      6 | {imaging-dev}                                       | </span>
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<td class="diff-line-num new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> libncl                        |      6 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext"> maqview                       |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> mrs                           |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> ncbi-seg                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> neobio                        |      6 | {cloud,bio}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -78,7 +80,7 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> sibsim4                       |      6 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> sigma-align                   |      6 | {bio,cloud,bio-phylogeny}                           | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> spread-phy                    |      6 | {bio,bio-phylogeny}                                 | </span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext"> <span class="idiff left right">anfo                          |      5</span> | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> <span class="idiff left right">squizz                        |      6</span> | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> beads                         |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> biomaj3-daemon                |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> bio-rainbow                   |      5 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -86,16 +88,14 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> bitseq                        |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> centrifuge                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> clonalorigin                  |      5 | {bio}                                               | </span>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> cluster3                      |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> daligner                      |      5 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> delly                         |      5 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> embassy-domalign              |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext"> embassy-domsearch             |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> gatb-core                     |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> harvest-tools                 |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> jellyfish1                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> lagan                         |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> mapsembler2                   |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="plaintext"> maqview                       |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> mhap                          |      5 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> microbegps                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> paraclu                       |      5 | {bio,cloud}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -113,7 +113,6 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> saint                         |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> seqtools                      |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> sickle                        |      5 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> squizz                        |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> transrate-tools               |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> transtermhp                   |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> treeview                      |      5 | {bio-phylogeny,bio}                                 | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -152,10 +151,10 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="plaintext"> relion                        |      4 | {bio}                                               | </span>
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<td class="diff-line-num old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> roguenarok                    |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> scythe                        |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext"> segemehl                      |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> sga                           |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> soapsnp                       |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="plaintext"> sprai                         |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC158" class="line" lang="plaintext"> stacks                        |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="plaintext"> tnseq-transit                 |      4 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="plaintext"> tracetuner                    |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="plaintext"> bart-view                     |      3 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"> runcircos-gui                 |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext"> samblaster                    |      3 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"> scrm                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="plaintext"> segemehl                      |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> seqmagick                     |      3 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> snap-aligner                  |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> soapaligner                   |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> spaced                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="plaintext"> stacks                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> suitename                     |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> surankco                      |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> vsearch                       |      3 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -201,7 +200,6 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> getdata                       |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="plaintext"> libvistaio                    |      2 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="plaintext"> logol                         |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="plaintext"> maxflow                       |      2 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> nanook                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="plaintext"> ngs-sdk                       |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="plaintext"> openslide                     |      2 | {imaging-dev}                                       | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -296,8 +294,8 @@ Last-Update: Mon, 27 Apr 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="plaintext"> orthanc-imagej                |      0 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="plaintext"> pbcopper                      |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="plaintext"> pbseqlib                      |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> relion                        |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="plaintext"> relion                        |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC298" class="line" lang="plaintext"> relion                        |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="plaintext"> sambamba                      |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="plaintext"> sbmltoolbox                   |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="plaintext"> seq-gen                       |      0 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="plaintext"> vtk-dicom                     |      0 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="plaintext"> wtdbg2                        |      0 | {covid-19}                                          | </span>
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="plaintext"> bustools                      |     -1 | {bio}                                               | </span>
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<td class="diff-line-num new_line old" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC312" class="line" lang="plaintext">(33<span class="idiff left right">7</span> rows)</span>
</pre>
</td>
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<tr class="line_holder new" id="" style="line-height: 1.6;">
<td class="diff-line-num new old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
310
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC310" class="line" lang="plaintext">(33<span class="idiff left right">4</span> rows)</span>
</pre>
</td>
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<tr class="line_holder" id="" style="line-height: 1.6;">
<td class="diff-line-num old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
313
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<td class="diff-line-num new_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
311
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC311" class="line" lang="plaintext"></span></pre>
</td>
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<li id="2654e31016bcee9bbe05d462121706cc8ed368af">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1017d619b350d2986ea753d57989d7f77eca7dfb#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
The diff for this file was not included because it is too large.
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