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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/manta">Debian Med / manta</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/manta/-/commit/1cd85e93fa9915e47e765540c51ccc0a7cef5bfb">1cd85e93</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-05-11T14:47:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.0+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<li class="file-stats">
<a href="#64ecc0f26b44f4b9d3445be30fc84c78bcbb017e">
COPYRIGHT.txt
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<li class="file-stats">
<a href="#38f19af7ed107ef74ba38b780659ded160c3be4f">
docs/developerGuide/README.md
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<li class="file-stats">
<a href="#7a963c7976a9a27341c486f4a156df1ffb2481e7">
docs/developerGuide/debugFullRun.md
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</li>
<li class="file-stats">
<a href="#d066085e296796e103f25dfc6e3ca51643d12a45">
docs/developerGuide/debugSingleSV.md
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<li class="file-stats">
<a href="#7e4345e5dde1c55745d43779ce7227d543f513f5">
docs/methods/primary/methods.tex
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<li class="file-stats">
<a href="#66db6f171dd6eb0b141be872538092bd510e596c">
docs/userGuide/README.md
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<li class="file-stats">
<a href="#99fed6930dcbe9d4ee8fecef75d6ac99b2e11a33">
redist/CMakeLists.txt
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<li class="file-stats">
<a href="#2020ecf7bc4c4e3a0a76fc3248171dbbc97e9780">
redist/README.md
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<li class="file-stats">
<a href="#e24567bfaee0ded447be4b0657e96cc36641f116">
<span class="new-file">
+
redist/ctpl-0.0.2/LICENSE
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<li class="file-stats">
<a href="#b0314985a6132073b477d2a86fec9b791d22cddc">
<span class="new-file">
+
redist/ctpl-0.0.2/README.md
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<li class="file-stats">
<a href="#571593eaffd973b76726aa79f9b08144e61bf845">
<span class="new-file">
+
redist/ctpl-0.0.2/ctpl.h
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<li class="file-stats">
<a href="#5f0ba77bcafde05db53c3360005f468ae684387d">
<span class="new-file">
+
redist/ctpl-0.0.2/ctpl_stl.h
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<li class="file-stats">
<a href="#631c8d07f5ea23b9a9f6c57f5389dfcf94bc33b7">
src/CMakeLists.txt
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<li class="file-stats">
<a href="#beb9644dd8db56dc8a43b9f6bb7c8a83ce2c8436">
<span class="new-file">
+
src/c++/.clang-format
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<li class="file-stats">
<a href="#dd10d67cd632572e0f140660a798c5597658c622">
src/c++/CMakeLists.txt
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<li class="file-stats">
<a href="#21393f595f26242d9076af2e2504856aff5007b4">
src/c++/bin/CMakeLists.txt
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<li class="file-stats">
<a href="#3eb112ad1c0cf1a26d8003aca3fb746b7ea972ca">
src/c++/bin/CheckSVLoci.cpp
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<li class="file-stats">
<a href="#05e82184107a3036e51c64caeb03f775750b1081">
src/c++/bin/DumpSVLoci.cpp
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<li class="file-stats">
<a href="#89d1ce2f92236f01fff503afc1e751b0c35f382d">
src/c++/bin/EstimateSVLoci.cpp
</a>
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<li class="file-stats">
<a href="#b9a24049d2491a1c3bcce43df22287dee65e54a9">
src/c++/bin/GenerateSVCandidates.cpp
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<li class="file-stats">
<a href="#76fb0df3d5efd8308a0a82f1c6e05c6f4b190d9f">
src/c++/bin/GetAlignmentStats.cpp
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<li class="file-stats">
<a href="#8c80dbcbc60a599c00b4bea2b2af1072f74e2854">
src/c++/bin/GetChromDepth.cpp
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<li class="file-stats">
<a href="#1f591586ecfc5e28d0d64188e2e4920b3a3b0dcb">
src/c++/bin/MergeAlignmentStats.cpp
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<li class="file-stats">
<a href="#af3f64509c1875e80fec7087cf38da26244ec8f7">
<span class="deleted-file">
−
src/c++/bin/MergeEdgeStats.cpp
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</a>
</li>
<li class="file-stats">
<a href="#a27f28df9360d4c8dc59b5220a298d28fe264a2f">
src/c++/bin/MergeSVLoci.cpp
</a>
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<li class="file-stats">
<a href="#5a0c20dd0cd85d4ef2bcde0f1fa15513be933dbc">
src/c++/bin/SummarizeAlignmentStats.cpp
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</li>
<li class="file-stats">
<a href="#13d9876d6745d8ecdc6aaad799937a3f01b8c002">
src/c++/bin/SummarizeSVLoci.cpp
</a>
</li>
<li class="file-stats">
<a href="#35e7d77d200ccd4c25868c94e6cc7228a907f7ea">
src/c++/bin/TestAssembler.cpp
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</li>
<li class="file-stats">
<a href="#2a8b217d30ec1e569ec53bdcb2cd92132d90e451">
src/c++/lib/CMakeLists.txt
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</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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