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<h3>
Ole Streicher pushed to branch upstream
at <a href="https://salsa.debian.org/python-team/modules/tifffile">Debian Python Team / DPMT / tifffile</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e">cddd23a4</a></strong>
<div>
<span>by Ole Streicher</span>
<i>at 2020-05-15T20:16:00+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 20200511</pre>
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<h4>19 changed files:</h4>
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<li class="file-stats">
<a href="#dbc56b7644003bb7d3028dd647c953d162a09aff">
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ACKNOWLEDGEMENTS.rst
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<li class="file-stats">
<a href="#4990be809a537bf86e4be2fe2e8251c83d8bd129">
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CHANGES.rst
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<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
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<li class="file-stats">
<a href="#8875df48c18030126ef5ef5a6f5c93b23451fb9f">
MANIFEST.in
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<li class="file-stats">
<a href="#7d26833a43d8865f6d9679068f6f9ee7d6e13dcf">
PKG-INFO
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<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
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<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<a href="#5978e2a758618b83aff2ba9c6eabe1c2db687823">
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−
setup_tiffile.py
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<a href="#626af34e8204774ea46e20955936146dedc828eb">
tests/conftest.py
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<a href="#0e68eb77c1fac130dbc2b1470ebea5146df3de0b">
tests/test_tifffile.py
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<a href="#624d16e4d51d3d7766973c48f57be57a653d8843">
tifffile.egg-info/PKG-INFO
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<a href="#011cbb90323ac69f4f6e70b621d4fc3319649927">
tifffile.egg-info/SOURCES.txt
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<a href="#6000dbe87c32bc435db544e8382e5f5b92e11e77">
tifffile.egg-info/requires.txt
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<a href="#85d98a4428185089b7087f93f8f67c463c7f97eb">
tifffile/__init__.py
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<a href="#2cdc4fd751aed69f9e2d0745721613fe9d1716f4">
tifffile/__main__.py
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<li class="file-stats">
<a href="#bc202f398b0197034f21f80808f47ee2a6dcf459">
tifffile/lsm2bin.py
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<a href="#0897a6ad59d4e84cc745635b88c27baf0a78bd92">
tifffile/tifffile.py
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<a href="#3acaf79eb91797daaf3cb983175bf48362192cf0">
tifffile/tifffile_geodb.py
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<a href="#2a8227a96cefa9bb7fb9ecf3547861080d92376d">
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−
tiffile.py
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<h4>Changes:</h4>
<li id="dbc56b7644003bb7d3028dd647c953d162a09aff">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#dbc56b7644003bb7d3028dd647c953d162a09aff"><strong>ACKNOWLEDGEMENTS.rst</strong></a>
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<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Acknowledgements</span>
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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">----------------</span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">* Egor Zindy, for lsm_scan_info specifics.</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">* Wim Lewis for a bug fix and some LSM functions.</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">* Hadrien Mary for help on reading MicroManager files.</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">* Christian Kliche for help writing tiled and color-mapped files.</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">* Grzegorz Bokota, for reporting and fixing OME-XML handling issues.</span></pre>
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</li>
<li id="4990be809a537bf86e4be2fe2e8251c83d8bd129">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#4990be809a537bf86e4be2fe2e8251c83d8bd129"><strong>CHANGES.rst</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Revisions</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">---------</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">2020.5.11</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Pass 2908 tests.</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Fix reading ImageJ grayscale mode RGB images (#6).</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> Remove napari reader plugin.</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">2020.5.7</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> Add napari reader plugin (tentative).</span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> Fix writing single tiles larger than image data (#3).</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> Always store ExtraSamples values in tuple (breaking).</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">2020.5.5</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> Allow to write tiled TIFF from iterator of tiles (WIP).</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> Add function to iterate over decoded segments of TiffPage (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> Pass chunks of segments to ThreadPoolExecutor.map to reduce memory usage.</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> Fix reading invalid files with too many strips.</span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> Fix writing over-aligned image data.</span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> Detect OME-XML without declaration (#2).</span>
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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> Support LERC compression (WIP).</span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> Delay load imagecodecs functions.</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> Remove maxsize parameter from asarray (breaking).</span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> Deprecate ijmetadata parameter from TiffWriter.save (use metadata).</span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext">2020.2.16</span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> Add function to decode individual strips or tiles.</span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> Read strips and tiles in order of their offsets.</span>
</pre>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> Enable multi-threading when decompressing multiple strips.</span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> Replace TiffPage.tags dictionary with TiffTags (breaking).</span>
</pre>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> Replace TIFF.TAGS dictionary with TiffTagRegistry.</span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> Remove TIFF.TAG_NAMES (breaking).</span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> Improve handling of TiffSequence parameters in imread.</span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> Match last uncommon parts of file paths to FileSequence pattern (breaking).</span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> Allow letters in FileSequence pattern for indexing well plate rows.</span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> Allow to reorder axes in FileSequence.</span>
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33
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> Allow to write > 4 GB arrays to plain TIFF when using compression.</span>
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34
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> Allow to write zero size numpy arrays to nonconformant TIFF (tentative).</span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> Fix xml2dict.</span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> Require imagecodecs >= 2020.1.31.</span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> Remove support for imagecodecs-lite (breaking).</span>
</pre>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> Remove verify parameter to asarray function (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> Remove deprecated lzw_decode functions (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> Remove support for Python 2.7 and 3.5 (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext">2019.7.26</span>
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<td class="diff-line-num new new_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> Fix infinite loop reading more than two tags of same code in IFD.</span>
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<td class="diff-line-num new new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> Delay import of logging module.</span>
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<td class="diff-line-num new new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext">2019.7.20</span>
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<td class="diff-line-num new new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> Fix OME-XML detection for files created by Imaris.</span>
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<td class="diff-line-num new new_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> Remove or replace assert statements.</span>
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<td class="diff-line-num new new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext">2019.7.2</span>
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<td class="diff-line-num new new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> Do not write SampleFormat tag for unsigned data types.</span>
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<td class="diff-line-num new new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> Write ByteCount tag values as SHORT or LONG if possible.</span>
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<td class="diff-line-num new new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
50
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> Allow to specify axes in FileSequence pattern via group names.</span>
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<td class="diff-line-num new new_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> Add option to concurrently read FileSequence using threads.</span>
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<td class="diff-line-num new new_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
52
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> Derive TiffSequence from FileSequence.</span>
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<td class="diff-line-num new new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> Use str(datetime.timedelta) to format Timer duration.</span>
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<td class="diff-line-num new new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> Use perf_counter for Timer if possible.</span>
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<td class="diff-line-num new new_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext">2019.6.18</span>
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<td class="diff-line-num new new_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> Fix reading planar RGB ImageJ files created by Bio-Formats.</span>
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<td class="diff-line-num new new_line" data-linenumber="57" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> Fix reading single-file, multi-image OME-TIFF without UUID.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> Presume LSM stores uncompressed images contiguously per page.</span>
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<td class="diff-line-num new new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> Reformat some complex expressions.</span>
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<td class="diff-line-num new new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext">2019.5.30</span>
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<td class="diff-line-num new new_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> Ignore invalid frames in OME-TIFF.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="62" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> Set default subsampling to (2, 2) for RGB JPEG compression.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> Fix reading and writing planar RGB JPEG compression.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> Replace buffered_read with FileHandle.read_segments.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> Include page or frame numbers in exceptions and warnings.</span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"> Add Timer class.</span>
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<td class="diff-line-num new new_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext">2019.5.22</span>
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<td class="diff-line-num new new_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> Add optional chroma subsampling for JPEG compression.</span>
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<td class="diff-line-num new new_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="plaintext"> Enable writing PNG, JPEG, JPEGXR, and JPEG2K compression (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext"> Fix writing tiled images with WebP compression.</span>
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<td class="diff-line-num new new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> Improve handling GeoTIFF sparse files.</span>
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<td class="diff-line-num new new_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext">2019.3.18</span>
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<td class="diff-line-num new new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="plaintext"> Fix regression decoding JPEG with RGB photometrics.</span>
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<td class="diff-line-num new new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> Fix reading OME-TIFF files with corrupted but unused pages.</span>
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<td class="diff-line-num new new_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> Allow to load TiffFrame without specifying keyframe.</span>
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<td class="diff-line-num new new_line" data-linenumber="76" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext"> Calculate virtual TiffFrames for non-BigTIFF ScanImage files > 2GB.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> Rename property is_chroma_subsampled to is_subsampled (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> Make more attributes and methods private (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="plaintext">2019.3.8</span>
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<td class="diff-line-num new new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> Fix MemoryError when RowsPerStrip > ImageLength.</span>
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext"> Fix SyntaxWarning on Python 3.8.</span>
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<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> Fail to decode JPEG to planar RGB (tentative).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> Separate public from private test files (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="plaintext"> Allow testing without data files or imagecodecs.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="plaintext">2019.2.22</span>
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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="plaintext"> Use imagecodecs-lite as a fallback for imagecodecs.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext"> Simplify reading numpy arrays from file.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="plaintext"> Use TiffFrames when reading arrays from page sequences.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext"> Support slices and iterators in TiffPageSeries sequence interface.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
90
</td>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="plaintext"> Auto-detect uniform series.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> Use page hash to determine generic series.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="plaintext"> Turn off TiffPages cache (tentative).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="plaintext"> Pass through more parameters in imread.</span>
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<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext"> Discontinue movie parameter in imread and TiffFile (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext"> Discontinue bigsize parameter in imwrite (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="plaintext"> Raise TiffFileError in case of issues with TIFF structure.</span>
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<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="plaintext"> Return TiffFile.ome_metadata as XML (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext"> Ignore OME series when last dimensions are not stored in TIFF pages.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="plaintext">2019.2.10</span>
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<td class="diff-line-num new new_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="plaintext"> Assemble IFDs in memory to speed-up writing on some slow media.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> Handle discontinued arguments fastij, multifile_close, and pages.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext">2019.1.30</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="plaintext"> Use black background in imshow.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext"> Do not write datetime tag by default (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext"> Fix OME-TIFF with SamplesPerPixel > 1.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="plaintext"> Allow 64-bit IFD offsets for NDPI (files > 4GB still not supported).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext">2019.1.4</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext"> Fix decoding deflate without imagecodecs.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="plaintext">2019.1.1</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="plaintext"> Update copyright year.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="plaintext"> Require imagecodecs >= 2018.12.16.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="plaintext"> Do not use JPEG tables from keyframe.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext"> Enable decoding large JPEG in NDPI.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext"> Decode some old-style JPEG.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext"> Reorder OME channel axis to match PlanarConfiguration storage.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext"> Return tiled images as contiguous arrays.</span>
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<td class="diff-line-num new new_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="plaintext"> Add decode_lzw proxy function for compatibility with old czifile module.</span>
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<td class="diff-line-num new new_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext"> Use dedicated logger.</span>
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<td class="diff-line-num new new_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext">2018.11.28</span>
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<td class="diff-line-num new new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="plaintext"> Make SubIFDs accessible as TiffPage.pages.</span>
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<td class="diff-line-num new new_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="plaintext"> Make parsing of TiffSequence axes pattern optional (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="plaintext"> Limit parsing of TiffSequence axes pattern to file names, not path names.</span>
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<td class="diff-line-num new new_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext"> Do not interpolate in imshow if image dimensions <= 512, else use bilinear.</span>
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<td class="diff-line-num new new_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="plaintext"> Use logging.warning instead of warnings.warn in many cases.</span>
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<td class="diff-line-num new new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext"> Fix numpy FutureWarning for out == 'memmap'.</span>
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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext"> Adjust ZSTD and WebP compression to libtiff-4.0.10 (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> Decode old-style LZW with imagecodecs >= 2018.11.8.</span>
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<td class="diff-line-num new new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="plaintext"> Remove TiffFile.qptiff_metadata (QPI metadata are per page).</span>
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<td class="diff-line-num new new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="plaintext"> Do not use keyword arguments before variable positional arguments.</span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext"> Make either all or none return statements in a function return expression.</span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="plaintext"> Use pytest parametrize to generate tests.</span>
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<td class="diff-line-num new new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="plaintext"> Replace test classes with functions.</span>
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<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext">2018.11.6</span>
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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext"> Rename imsave function to imwrite.</span>
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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext"> Readd Python implementations of packints, delta, and bitorder codecs.</span>
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<td class="diff-line-num new new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="plaintext"> Fix TiffFrame.compression AttributeError.</span>
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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext">2018.10.18</span>
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<td class="diff-line-num new new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="plaintext"> Rename tiffile package to tifffile.</span>
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<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="plaintext">2018.10.10</span>
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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="plaintext"> Read ZIF, the Zoomable Image Format (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext"> Decode YCbCr JPEG as RGB (tentative).</span>
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<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="plaintext"> Improve restoration of incomplete tiles.</span>
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<td class="diff-line-num new new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext"> Allow to write grayscale with extrasamples without specifying planarconfig.</span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext"> Enable decoding of PNG and JXR via imagecodecs.</span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"> Deprecate 32-bit platforms (too many memory errors during tests).</span>
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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext">2018.9.27</span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="plaintext"> Read Olympus SIS (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext"> Allow to write non-BigTIFF files up to ~4 GB (fix).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="plaintext"> Fix parsing date and time fields in SEM metadata.</span>
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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext"> Detect some circular IFD references.</span>
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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext"> Enable WebP codecs via imagecodecs.</span>
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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="plaintext"> Add option to read TiffSequence from ZIP containers.</span>
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<td class="diff-line-num new new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="plaintext"> Remove TiffFile.isnative.</span>
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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext"> Move TIFF struct format constants out of TiffFile namespace.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="plaintext">2018.8.31</span>
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<td class="diff-line-num new new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="plaintext"> Fix wrong TiffTag.valueoffset.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="plaintext"> Towards reading Hamamatsu NDPI (WIP).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="plaintext"> Enable PackBits compression of byte and bool arrays.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="plaintext"> Fix parsing NULL terminated CZ_SEM strings.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="plaintext">2018.8.24</span>
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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="plaintext"> Move tifffile.py and related modules into tiffile package.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext"> Move usage examples to module docstring.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="plaintext"> Enable multi-threading for compressed tiles and pages by default.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="plaintext"> Add option to concurrently decode image tiles using threads.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="plaintext"> Do not skip empty tiles (fix).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="plaintext"> Read JPEG and J2K compressed strips and tiles.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="plaintext"> Allow floating-point predictor on write.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="plaintext"> Add option to specify subfiletype on write.</span>
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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="plaintext"> Depend on imagecodecs package instead of _tifffile, lzma, etc modules.</span>
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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext"> Remove reverse_bitorder, unpack_ints, and decode functions.</span>
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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="plaintext"> Use pytest instead of unittest.</span>
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<td class="diff-line-num new new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="plaintext">2018.6.20</span>
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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="plaintext"> Save RGBA with unassociated extrasample by default (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext"> Add option to specify ExtraSamples values.</span>
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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext">2018.6.17 (included with 0.15.1)</span>
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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="plaintext"> Towards reading JPEG and other compressions via imagecodecs package (WIP).</span>
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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="plaintext"> Read SampleFormat VOID as UINT.</span>
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<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="plaintext"> Add function to validate TIFF using 'jhove -m TIFF-hul'.</span>
</pre>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="plaintext"> Save bool arrays as bilevel TIFF.</span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="plaintext"> Accept pathlib.Path as filenames.</span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="plaintext"> Move 'software' argument from TiffWriter __init__ to save.</span>
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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="plaintext"> Raise DOS limit to 16 TB.</span>
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<td class="diff-line-num new new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="plaintext"> Lazy load LZMA and ZSTD compressors and decompressors.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="plaintext"> Add option to save IJMetadata tags.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="plaintext"> Return correct number of pages for truncated series (fix).</span>
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<td class="diff-line-num new new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="plaintext"> Move EXIF tags to TIFF.TAG as per TIFF/EP standard.</span>
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<td class="diff-line-num new new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="plaintext">2018.2.18</span>
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<td class="diff-line-num new new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext"> Always save RowsPerStrip and Resolution tags as required by TIFF standard.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="plaintext"> Do not use badly typed ImageDescription.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="plaintext"> Coerce bad ASCII string tags to bytes.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="plaintext"> Tuning of __str__ functions.</span>
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<td class="diff-line-num new new_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="plaintext"> Fix reading 'undefined' tag values.</span>
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<td class="diff-line-num new new_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="plaintext"> Read and write ZSTD compressed data.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="plaintext"> Use hexdump to print bytes.</span>
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<td class="diff-line-num new new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext"> Determine TIFF byte order from data dtype in imsave.</span>
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<td class="diff-line-num new new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="plaintext"> Add option to specify RowsPerStrip for compressed strips.</span>
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<td class="diff-line-num new new_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="plaintext"> Allow memory-map of arrays with non-native byte order.</span>
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<td class="diff-line-num new new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="plaintext"> Attempt to handle ScanImage <= 5.1 files.</span>
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<td class="diff-line-num new new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="plaintext"> Restore TiffPageSeries.pages sequence interface.</span>
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<td class="diff-line-num new new_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="plaintext"> Use numpy.frombuffer instead of fromstring to read from binary data.</span>
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<td class="diff-line-num new new_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="plaintext"> Parse GeoTIFF metadata.</span>
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<td class="diff-line-num new new_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="plaintext"> Add option to apply horizontal differencing before compression.</span>
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<td class="diff-line-num new new_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="plaintext"> Towards reading PerkinElmer QPI (QPTIFF, no test files).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="plaintext"> Do not index out of bounds data in tifffile.c unpackbits and decodelzw.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="plaintext">2017.9.29</span>
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<td class="diff-line-num new new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="plaintext"> Many backward incompatible changes improving speed and resource usage:</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="plaintext"> Add detail argument to __str__ function. Remove info functions.</span>
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<td class="diff-line-num new new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="plaintext"> Fix potential issue correcting offsets of large LSM files with positions.</span>
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<td class="diff-line-num new new_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="plaintext"> Remove TiffFile sequence interface; use TiffFile.pages instead.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="plaintext"> Do not make tag values available as TiffPage attributes.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext"> Use str (not bytes) type for tag and metadata strings (WIP).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="plaintext"> Use documented standard tag and value names (WIP).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="plaintext"> Use enums for some documented TIFF tag values.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="plaintext"> Remove 'memmap' and 'tmpfile' options; use out='memmap' instead.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="plaintext"> Add option to specify output in asarray functions.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="plaintext"> Add option to concurrently decode pages using threads.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="plaintext"> Add TiffPage.asrgb function (WIP).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="plaintext"> Do not apply colormap in asarray.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="plaintext"> Remove 'colormapped', 'rgbonly', and 'scale_mdgel' options from asarray.</span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="plaintext"> Consolidate metadata in TiffFile _metadata functions.</span>
</pre>
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221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext"> Remove non-tag metadata properties from TiffPage.</span>
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222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="plaintext"> Add function to convert LSM to tiled BIN files.</span>
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<td class="diff-line-num new new_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="plaintext"> Align image data in file.</span>
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224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext"> Make TiffPage.dtype a numpy.dtype.</span>
</pre>
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225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="plaintext"> Add 'ndim' and 'size' properties to TiffPage and TiffPageSeries.</span>
</pre>
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226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="plaintext"> Allow imsave to write non-BigTIFF files up to ~4 GB.</span>
</pre>
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227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="plaintext"> Only read one page for shaped series if possible.</span>
</pre>
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228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="plaintext"> Add memmap function to create memory-mapped array stored in TIFF file.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
229
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="plaintext"> Add option to save empty arrays to TIFF files.</span>
</pre>
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230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="plaintext"> Add option to save truncated TIFF files.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="plaintext"> Allow single tile images to be saved contiguously.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="plaintext"> Add optional movie mode for files with uniform pages.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
233
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="plaintext"> Lazy load pages.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="plaintext"> Use lightweight TiffFrame for IFDs sharing properties with key TiffPage.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
235
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="plaintext"> Move module constants to 'TIFF' namespace (speed up module import).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
236
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext"> Remove 'fastij' option from TiffFile.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
237
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="plaintext"> Remove 'pages' parameter from TiffFile.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="plaintext"> Remove TIFFfile alias.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="plaintext"> Deprecate Python 2.</span>
</pre>
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240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="plaintext"> Require enum34 and futures packages on Python 2.7.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="plaintext"> Remove Record class and return all metadata as dict instead.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="plaintext"> Add functions to parse STK, MetaSeries, ScanImage, SVS, Pilatus metadata.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
243
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="plaintext"> Read tags from EXIF and GPS IFDs.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
244
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="plaintext"> Use pformat for tag and metadata values.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
245
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="plaintext"> Fix reading some UIC tags.</span>
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<td class="diff-line-num new new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="plaintext"> Do not modify input array in imshow (fix).</span>
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247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="plaintext"> Fix Python implementation of unpack_ints.</span>
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248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="plaintext">2017.5.23</span>
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<td class="diff-line-num new new_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="plaintext"> Write correct number of SampleFormat values (fix).</span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="plaintext"> Use Adobe deflate code to write ZIP compressed files.</span>
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<td class="diff-line-num new new_line" data-linenumber="251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="plaintext"> Add option to pass tag values as packed binary data for writing.</span>
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<td class="diff-line-num new new_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
252
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="plaintext"> Defer tag validation to attribute access.</span>
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<td class="diff-line-num new new_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
253
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="plaintext"> Use property instead of lazyattr decorator for simple expressions.</span>
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<td class="diff-line-num new new_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="plaintext">2017.3.17</span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="plaintext"> Write IFDs and tag values on word boundaries.</span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="plaintext"> Read ScanImage metadata.</span>
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257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="plaintext"> Remove is_rgb and is_indexed attributes from TiffFile.</span>
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258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="plaintext"> Create files used by doctests.</span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="plaintext">2017.1.12 (included with scikit-image 0.14.x)</span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="plaintext"> Read Zeiss SEM metadata.</span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="plaintext"> Read OME-TIFF with invalid references to external files.</span>
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<td class="diff-line-num new new_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="plaintext"> Rewrite C LZW decoder (5x faster).</span>
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<td class="diff-line-num new new_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="plaintext"> Read corrupted LSM files missing EOI code in LZW stream.</span>
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<td class="diff-line-num new new_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="plaintext">2017.1.1</span>
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<td class="diff-line-num new new_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="plaintext"> Add option to append images to existing TIFF files.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="plaintext"> Read files without pages.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="plaintext"> Read S-FEG and Helios NanoLab tags created by FEI software.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="plaintext"> Allow saving Color Filter Array (CFA) images.</span>
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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="plaintext"> Add info functions returning more information about TiffFile and TiffPage.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="plaintext"> Add option to read specific pages only.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="plaintext"> Remove maxpages argument (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="plaintext"> Remove test_tifffile function.</span>
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<td class="diff-line-num new new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="plaintext">2016.10.28</span>
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<td class="diff-line-num new new_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="plaintext"> Improve detection of ImageJ hyperstacks.</span>
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<td class="diff-line-num new new_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="plaintext"> Read TVIPS metadata created by EM-MENU (by Marco Oster).</span>
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<td class="diff-line-num new new_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="plaintext"> Add option to disable using OME-XML metadata.</span>
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<td class="diff-line-num new new_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="plaintext"> Allow non-integer range attributes in modulo tags (by Stuart Berg).</span>
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<td class="diff-line-num new new_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="plaintext">2016.6.21</span>
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<td class="diff-line-num new new_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="plaintext"> Do not always memmap contiguous data in page series.</span>
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<td class="diff-line-num new new_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
280
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<pre style="margin: 0;">+<span id="LC280" class="line" lang="plaintext">2016.5.13</span>
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<td class="diff-line-num new new_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
281
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="plaintext"> Add option to specify resolution unit.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
282
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="plaintext"> Write grayscale images with extra samples when planarconfig is specified.</span>
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<td class="diff-line-num new new_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
283
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="plaintext"> Do not write RGB color images with 2 samples.</span>
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<td class="diff-line-num new new_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="plaintext"> Reorder TiffWriter.save keyword arguments (breaking).</span>
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<td class="diff-line-num new new_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
285
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<pre style="margin: 0;">+<span id="LC285" class="line" lang="plaintext">2016.4.18</span>
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<td class="diff-line-num new new_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
286
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="plaintext"> TiffWriter, imread, and imsave accept open binary file streams.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
287
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<pre style="margin: 0;">+<span id="LC287" class="line" lang="plaintext">2016.04.13</span>
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<td class="diff-line-num new new_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
288
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="plaintext"> Fix reversed fill order in 2 and 4 bps images.</span>
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<td class="diff-line-num new new_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="plaintext"> Implement reverse_bitorder in C.</span>
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<td class="diff-line-num new new_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
290
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="plaintext">2016.03.18</span>
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<td class="diff-line-num new new_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
291
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<pre style="margin: 0;">+<span id="LC291" class="line" lang="plaintext"> Fix saving additional ImageJ metadata.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
292
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="plaintext">2016.2.22</span>
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<td class="diff-line-num new new_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
293
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="plaintext"> Write 8 bytes double tag values using offset if necessary (bug fix).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
294
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC294" class="line" lang="plaintext"> Add option to disable writing second image description tag.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
295
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<pre style="margin: 0;">+<span id="LC295" class="line" lang="plaintext"> Detect tags with incorrect counts.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
296
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="plaintext"> Disable color mapping for LSM.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
297
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="plaintext">2015.11.13</span>
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<td class="diff-line-num new new_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
298
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<pre style="margin: 0;">+<span id="LC298" class="line" lang="plaintext"> Read LSM 6 mosaics.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
299
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="plaintext"> Add option to specify directory of memory-mapped files.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
300
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<pre style="margin: 0;">+<span id="LC300" class="line" lang="plaintext"> Add command line options to specify vmin and vmax values for colormapping.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
301
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="plaintext">2015.10.06</span>
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<td class="diff-line-num new new_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
302
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC302" class="line" lang="plaintext"> New helper function to apply colormaps.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
303
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC303" class="line" lang="plaintext"> Renamed is_palette attributes to is_indexed (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
304
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="plaintext"> Color-mapped samples are now contiguous (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
305
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC305" class="line" lang="plaintext"> Do not color-map ImageJ hyperstacks (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
306
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC306" class="line" lang="plaintext"> Towards reading Leica SCN.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
307
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="plaintext">2015.9.25</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
308
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC308" class="line" lang="plaintext"> Read images with reversed bit order (FillOrder is LSB2MSB).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
309
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="plaintext">2015.9.21</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
310
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="plaintext"> Read RGB OME-TIFF.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
311
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<pre style="margin: 0;">+<span id="LC311" class="line" lang="plaintext"> Warn about malformed OME-XML.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
312
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<pre style="margin: 0;">+<span id="LC312" class="line" lang="plaintext">2015.9.16</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
313
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="plaintext"> Detect some corrupted ImageJ metadata.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
314
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC314" class="line" lang="plaintext"> Better axes labels for 'shaped' files.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
315
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC315" class="line" lang="plaintext"> Do not create TiffTag for default values.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
316
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC316" class="line" lang="plaintext"> Chroma subsampling is not supported.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
317
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC317" class="line" lang="plaintext"> Memory-map data in TiffPageSeries if possible (optional).</span>
</pre>
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</td>
<td class="diff-line-num new new_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
318
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="plaintext">2015.8.17</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
319
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC319" class="line" lang="plaintext"> Write ImageJ hyperstacks (optional).</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
320
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC320" class="line" lang="plaintext"> Read and write LZMA compressed data.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
321
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC321" class="line" lang="plaintext"> Specify datetime when saving (optional).</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
322
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<pre style="margin: 0;">+<span id="LC322" class="line" lang="plaintext"> Save tiled and color-mapped images (optional).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
323
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<pre style="margin: 0;">+<span id="LC323" class="line" lang="plaintext"> Ignore void bytecounts and offsets if possible.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
324
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC324" class="line" lang="plaintext"> Ignore bogus image_depth tag created by ISS Vista software.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
325
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<pre style="margin: 0;">+<span id="LC325" class="line" lang="plaintext"> Decode floating-point horizontal differencing (not tiled).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
326
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC326" class="line" lang="plaintext"> Save image data contiguously if possible.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
327
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC327" class="line" lang="plaintext"> Only read first IFD from ImageJ files if possible.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
328
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC328" class="line" lang="plaintext"> Read ImageJ 'raw' format (files larger than 4 GB).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
329
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC329" class="line" lang="plaintext"> TiffPageSeries class for pages with compatible shape and data type.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
330
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC330" class="line" lang="plaintext"> Try to read incomplete tiles.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
331
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC331" class="line" lang="plaintext"> Open file dialog if no filename is passed on command line.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
332
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC332" class="line" lang="plaintext"> Ignore errors when decoding OME-XML.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
333
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC333" class="line" lang="plaintext"> Rename decoder functions (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="334" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
334
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<pre style="margin: 0;">+<span id="LC334" class="line" lang="plaintext">2014.8.24</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="335" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
335
</td>
<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC335" class="line" lang="plaintext"> TiffWriter class for incremental writing images.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
336
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<pre style="margin: 0;">+<span id="LC336" class="line" lang="plaintext"> Simplify examples.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="337" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
337
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<pre style="margin: 0;">+<span id="LC337" class="line" lang="plaintext">2014.8.19</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
338
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC338" class="line" lang="plaintext"> Add memmap function to FileHandle.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
339
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC339" class="line" lang="plaintext"> Add function to determine if image data in TiffPage is memory-mappable.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="340" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
340
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="plaintext"> Do not close files if multifile_close parameter is False.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="341" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
341
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="plaintext">2014.8.10</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="342" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
342
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="plaintext"> Return all extrasamples by default (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="343" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
343
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="plaintext"> Read data from series of pages into memory-mapped array (optional).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="344" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
344
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC344" class="line" lang="plaintext"> Squeeze OME dimensions (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="345" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
345
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<pre style="margin: 0;">+<span id="LC345" class="line" lang="plaintext"> Workaround missing EOI code in strips.</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="346" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
346
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<pre style="margin: 0;">+<span id="LC346" class="line" lang="plaintext"> Support image and tile depth tags (SGI extension).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="347" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
347
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<pre style="margin: 0;">+<span id="LC347" class="line" lang="plaintext"> Better handling of STK/UIC tags (breaking).</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="348" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="plaintext"> Disable color mapping for STK.</span>
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<td class="diff-line-num new new_line" data-linenumber="349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
349
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="plaintext"> Julian to datetime converter.</span>
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350
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="plaintext"> TIFF ASCII type may be NULL separated.</span>
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<td class="diff-line-num new new_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="plaintext"> Unwrap strip offsets for LSM files greater than 4 GB.</span>
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352
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="plaintext"> Correct strip byte counts in compressed LSM files.</span>
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353
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="plaintext"> Skip missing files in OME series.</span>
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354
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="plaintext"> Read embedded TIFF files.</span>
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355
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="plaintext">2014.2.05</span>
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356
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="plaintext"> Save rational numbers as type 5 (bug fix).</span>
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357
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="plaintext">2013.12.20</span>
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358
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="plaintext"> Keep other files in OME multi-file series closed.</span>
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359
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="plaintext"> FileHandle class to abstract binary file handle.</span>
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360
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="plaintext"> Disable color mapping for bad OME-TIFF produced by bio-formats.</span>
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361
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="plaintext"> Read bad OME-XML produced by ImageJ when cropping.</span>
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362
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="plaintext">2013.11.3</span>
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363
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<pre style="margin: 0;">+<span id="LC363" class="line" lang="plaintext"> Allow zlib compress data in imsave function (optional).</span>
</pre>
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364
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<pre style="margin: 0;">+<span id="LC364" class="line" lang="plaintext"> Memory-map contiguous image data (optional).</span>
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365
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="plaintext">2013.10.28</span>
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366
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="plaintext"> Read MicroManager metadata and little-endian ImageJ tag.</span>
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367
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<pre style="margin: 0;">+<span id="LC367" class="line" lang="plaintext"> Save extra tags in imsave function.</span>
</pre>
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368
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="plaintext"> Save tags in ascending order by code (bug fix).</span>
</pre>
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369
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="plaintext">2012.10.18</span>
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370
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<pre style="margin: 0;">+<span id="LC370" class="line" lang="plaintext"> Accept file like objects (read from OIB files).</span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="plaintext">2012.8.21</span>
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<td class="diff-line-num new new_line" data-linenumber="372" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="plaintext"> Rename TIFFfile to TiffFile and TIFFpage to TiffPage.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="plaintext"> TiffSequence class for reading sequence of TIFF files.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="374" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="plaintext"> Read UltraQuant tags.</span>
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<pre style="margin: 0;">+<span id="LC375" class="line" lang="plaintext"> Allow float numbers as resolution in imsave function.</span>
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<pre style="margin: 0;">+<span id="LC376" class="line" lang="plaintext">2012.8.3</span>
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<pre style="margin: 0;">+<span id="LC377" class="line" lang="plaintext"> Read MD GEL tags and NIH Image header.</span>
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<pre style="margin: 0;">+<span id="LC378" class="line" lang="plaintext">2012.7.25</span>
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="plaintext"> Read ImageJ tags.</span>
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="plaintext"> ...</span></pre>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">Copyright (c) 2008-2018, Christoph Gohlk</span>e</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"><span class="idiff left right">Produced at the Laboratory for Fluorescence Dynamics</span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext"><span class="idiff left right">BSD 3-Clause Licens</span>e</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"><span class="idiff left right">Copyright (c) 2008-2020, Christoph Gohlke</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Redistribution and use in source and binary forms, with or without</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">modification, are permitted provided that the following conditions are met:</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"><span class="idiff left right">*</span> Redistributions of source code must retain the above copyright notice,</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> this list of conditions and the following disclaimer.</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"><span class="idiff left right">1.</span> Redistributions of source code must retain the above copyright notice,</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> <span class="idiff left right"> </span>this list of conditions and the following disclaimer.</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"><span class="idiff left right">*</span> Redistributions in binary form must reproduce the above copyright notice,</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> this list of conditions and the following disclaimer in the documentation</span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> and/or other materials provided with the distribution.</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"><span class="idiff left right">2.</span> Redistributions in binary form must reproduce the above copyright notice,</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> <span class="idiff left right"> </span>this list of conditions and the following disclaimer in the documentation</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> <span class="idiff left right"> </span>and/or other materials provided with the distribution.</span>
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15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"><span class="idiff left right">*</span> Neither the name of the copyright holder nor the names of its</span>
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17
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> contributors may be used to endorse or promote products derived from</span>
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18
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> this software without specific prior written permission.</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"><span class="idiff left right">3.</span> Neither the name of the copyright holder nor the names of its</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> <span class="idiff left right"> </span>contributors may be used to endorse or promote products derived from</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right"> </span>this software without specific prior written permission.</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"></span>
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20
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE</span>
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<li id="8875df48c18030126ef5ef5a6f5c93b23451fb9f">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#8875df48c18030126ef5ef5a6f5c93b23451fb9f"><strong>MANIFEST.in</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">include LICENSE</span>
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">include README.rst</span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">include CHANGES.rst</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">include ACKNOWLEDGEMENTS.rst</span>
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3
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">include tiffile.py</span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">include setup_tiffile.py</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"><span class="idiff left right"># </span>include tiffile.py</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"><span class="idiff left right"># </span>include setup_tiffile.py</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">include tests/*.py</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">recursive-exclude * __pycache__</span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Metadata</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">2.1</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="mosel"><span class="n" style="color: #333;">Name</span><span class="p">:</span> <span class="n" style="color: #333;">tifffile</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">Version: 20<span class="idiff left right">18.11.28</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">20<span class="idiff left right">20.5.11</span></span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="mosel"><span class="n" style="color: #333;">Summary</span><span class="p">:</span> <span class="n" style="color: #333;">Read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">TIFF</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">)</span> <span class="n" style="color: #333;">files</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="mosel"><span class="n" style="color: #333;">Home</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">lfd</span><span class="p">.</span><span class="n" style="color: #333;">uci</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/~</span><span class="n" style="color: #333;">gohlke</span><span class="p">/</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="mosel"><span class="n" style="color: #333;">Author</span><span class="p">:</span> <span class="n" style="color: #333;">Christoph</span> <span class="n" style="color: #333;">Gohlke</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,29 +12,29 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">library</span> <span class="k" style="font-weight: 600;">to</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">)</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> (2) read image and metadata from TIFF<span class="idiff left right"> </span>like files used in bioimaging.</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">used</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">bioimaging</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, <span class="idiff left right">NIH</span>,</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right">SGI, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS, ZIF</span>,</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> <span class="idiff left right">Q</span>PI, and GeoTIFF files.</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="mosel"> <span class="n" style="color: #333;">Image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left right">SGI</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">NIHImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ImageJ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroManager</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">FluoView</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ScanImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SEQ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">GEL</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SVS</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SCN</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">SIS</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">ZIF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">ND</span>PI</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="mosel"> <span class="n" style="color: #333;">Numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">written</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstack</span> <span class="n" style="color: #333;">compatible</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="mosel"> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mappable</span><span class="p">,</span> <span class="n" style="color: #333;">tiled</span><span class="p">,</span> <span class="n" style="color: #333;">predicted</span><span class="p">,</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">form</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right">Only a</span> subset of the TIFF specification is supported, mainly uncompressed and</span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> losslessly compressed <span class="idiff left right">1, </span>8, 16, 32 and 64-bit integer, 16, 32 and 64-bit float,</span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> grayscale and <span class="idiff left right">RGB(A)</span> images.</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left right">A</span></span> <span class="n" style="color: #333;">subset</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">specification</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">supported</span><span class="p">,</span> <span class="n" style="color: #333;">mainly</span> <span class="n" style="color: #333;">uncompressed</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="mosel"> <span class="n" style="color: #333;">losslessly</span> <span class="n" style="color: #333;">compressed</span> <span class="m" style="color: #099;">8</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="k" style="font-weight: 600;">integer</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">float</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="mosel"> <span class="n" style="color: #333;">grayscale</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;"><span class="idiff left">multi</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff right">sample</span></span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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27
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="mosel"> <span class="n" style="color: #333;">Specifically</span><span class="p">,</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">CCITT</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">OJPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> chroma subsampling without JPEG compression, <span class="idiff left right">or IPTC and XMP metadata are not</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> implemented.</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="mosel"> <span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">color</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">space</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">transformations</span></span><span class="p"><span class="idiff right">,</span></span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">samples</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">with</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">differing</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">types</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">or</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">IPTC</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">XMP</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">metadata</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">not</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">implemented</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="mosel"> <span class="n" style="color: #333;">TIFF</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">),</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">,</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">trademark</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">control</span> <span class="k" style="font-weight: 600;">of</span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> Adobe Systems Incorporated. BigTIFF allows for files <span class="idiff left right">great</span>er than 4 GB.</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> STK, LSM, FluoView, SGI, SEQ, GEL, <span class="idiff left right">and OME-TIFF, are custom extensions</span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> <span class="idiff left right">defined by Molecular Devices (Universal Imaging Corporation), Carl Zeiss</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> <span class="idiff left right">MicroImaging, Olympus, Silicon Graphics International, Media Cybernetics</span>,</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> M<span class="idiff left right">olecular Dynamics, and the Open Microscopy Environment consortium</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> respectively.</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="mosel"> <span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;"><span class="idiff left right">larg</span>er</span> <span class="n" style="color: #333;">than</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;">FluoView</span><span class="p">,</span> <span class="n" style="color: #333;">SGI</span><span class="p">,</span> <span class="n" style="color: #333;">SEQ</span><span class="p">,</span> <span class="n" style="color: #333;">GEL</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">NDPI</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">OME</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">custom</span></span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">extensions</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">defined</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">by</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Devices</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">Universal</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Imaging</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Corporation</span></span><span class="p"><span class="idiff right">),</span></span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">Carl</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Zeiss</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroImaging</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Olympus</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Silicon</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Graphics</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">International</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="mosel"> <span class="n" style="color: #333;">M<span class="idiff left">edia</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Cybernetics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Dynamics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">PerkinElmer</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Hamamatsu</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">the</span></span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">Open</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Microscopy</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Environment</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">consortium</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">respectively</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="mosel"> <span class="n" style="color: #333;">For</span> <span class="nf" style="color: #900; font-weight: 600;">command</span> <span class="n" style="color: #333;">line</span> <span class="n" style="color: #333;">usage</span> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">tifffile</span> <span class="p">--</span><span class="n" style="color: #333;">help</span><span class="p">``</span></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="mosel"> </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,29 +44,148 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="mosel"> <span class="p">:</span><span class="n" style="color: #333;">Organization</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">Laboratory</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Fluorescence</span> <span class="n" style="color: #333;">Dynamics</span><span class="p">,</span> <span class="n" style="color: #333;">University</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">California</span><span class="p">,</span> <span class="n" style="color: #333;">Irvine</span></span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> :Version: 2018.11.28</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="mosel"> <span class="p">:</span><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">BSD</span> <span class="m" style="color: #099;">3</span><span class="p">-</span><span class="n" style="color: #333;">Clause</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="mosel"> <span class="p">:</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">2020.5.11</span></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Requirements</span></span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="mosel"> <span class="p">------------</span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> * `CPython 2.7 or 3.5+ 64-bit <https://www.python.org>`_</span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> * `Numpy 1.14 <https://www.numpy.org>`_</span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> * `Imagecodecs 2018.11.8 <https://pypi.org/project/imagecodecs/>`_</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> (optional; used for decoding LZW, JPEG, etc.)</span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext"> * `Matplotlib 2.2 <https://www.matplotlib.org>`_ (optional; used for plotting)</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext"> * Python 2.7 requires 'futures', 'enum34', and 'pathlib'.</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="mosel"> <span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">release</span> <span class="n" style="color: #333;">has</span> <span class="n" style="color: #333;">been</span> <span class="n" style="color: #333;">tested</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">following</span> <span class="k" style="font-weight: 600;">requirements</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dependencies</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">work</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CPython</span> <span class="m" style="color: #099;">3.6.8</span><span class="p">,</span> <span class="m" style="color: #099;">3.7.7</span><span class="p">,</span> <span class="m" style="color: #099;">3.8.2</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">python</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Numpy</span> <span class="m" style="color: #099;">1.16.6</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imagecodecs</span> <span class="m" style="color: #099;">2020.2.18</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">etc</span><span class="p">.)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Matplotlib</span> <span class="m" style="color: #099;">3.1</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">matplotlib</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">plotting</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="mosel"> </span>
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62
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="mosel"> <span class="n" style="color: #333;">Revisions</span></span>
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59
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63
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="mosel"> <span class="p">---------</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.11</span></span>
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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="m" style="color: #099;">2908</span> <span class="n" style="color: #333;">tests</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">mode</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">images</span> <span class="p">(#</span><span class="m" style="color: #099;">6</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.7</span></span>
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<td class="diff-line-num new new_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">single</span> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">larger</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="p">(#</span><span class="m" style="color: #099;">3</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="mosel"> <span class="n" style="color: #333;">Always</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">ExtraSamples</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tuple</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.5</span></span>
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<td class="diff-line-num new new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">decoded</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffPage</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">chunks</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">ThreadPoolExecutor</span><span class="p">.</span><span class="n" style="color: #333;">map</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reduce</span> <span class="n" style="color: #333;">memory</span> <span class="n" style="color: #333;">usage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="76" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">too</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">over</span><span class="p">-</span><span class="n" style="color: #333;">aligned</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">Detect</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">declaration</span> <span class="p">(#</span><span class="m" style="color: #099;">2</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">LERC</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">functions</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">maxsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">asarray</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">Deprecate</span> <span class="n" style="color: #333;">ijmetadata</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">.</span><span class="n" style="color: #333;">save</span> <span class="p">(</span><span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">metadata</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.2.16</span></span>
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<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">individual</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tiles</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">order</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">their</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">threading</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">decompressing</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">tags</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTags</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAGS</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTagRegistry</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAG_NAMES</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="mosel"> <span class="n" style="color: #333;">Match</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">uncommon</span> <span class="n" style="color: #333;">parts</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">paths</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">letters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">indexing</span> <span class="n" style="color: #333;">well</span> <span class="n" style="color: #333;">plate</span> <span class="n" style="color: #333;">rows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reorder</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">plain</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">zero</span> <span class="n" style="color: #333;">size</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">nonconformant</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">xml2dict</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2020.1.31</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">verify</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">asarray</span> <span class="k" style="font-weight: 600;">function</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
</pre>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">deprecated</span> <span class="n" style="color: #333;">lzw_decode</span> <span class="n" style="color: #333;">functions</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">2.7</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">3.5</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.26</span></span>
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<td class="diff-line-num new new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">infinite</span> <span class="n" style="color: #333;">loop</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">two</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">same</span> <span class="n" style="color: #333;">code</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="n" style="color: #333;">import</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">logging</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.20</span></span>
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<td class="diff-line-num new new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">detection</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Imaris</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">replace</span> <span class="nb" style="color: #0086b3;">assert</span> <span class="n" style="color: #333;">statements</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.2</span></span>
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<td class="diff-line-num new new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">SampleFormat</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">unsigned</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="mosel"> <span class="n" style="color: #333;">Write</span> <span class="n" style="color: #333;">ByteCount</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">SHORT</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">LONG</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">specify</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">via</span> <span class="n" style="color: #333;">group</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">option</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">concurrently</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">threads</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="mosel"> <span class="n" style="color: #333;">Derive</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">str</span><span class="p">(</span><span class="n" style="color: #333;">datetime</span><span class="p">.</span><span class="n" style="color: #333;">timedelta</span><span class="p">)</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">duration</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">perf_counter</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Timer</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.6.18</span></span>
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<td class="diff-line-num new new_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Bio</span><span class="p">-</span><span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">single</span><span class="p">-</span><span class="n" style="color: #333;">file</span><span class="p">,</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">UUID</span><span class="p">.</span></span>
</pre>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="mosel"> <span class="n" style="color: #333;">Presume</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">uncompressed</span> <span class="n" style="color: #333;">images</span> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="mosel"> <span class="n" style="color: #333;">Reformat</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">complex</span> <span class="n" style="color: #333;">expressions</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.5.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">frames</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Set</span> <span class="n" style="color: #333;">default</span> <span class="n" style="color: #333;">subsampling</span> <span class="k" style="font-weight: 600;">to</span> <span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">buffered_read</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">FileHandle</span><span class="p">.</span><span class="n" style="color: #333;">read_segments</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Include</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">frame</span> <span class="n" style="color: #333;">numbers</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">exceptions</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">class</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.5.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">optional</span> <span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">PNG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEGXR</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">JPEG2K</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.3.18</span></span>
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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">regression</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">photometrics</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">corrupted</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">unused</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">TiffFrame</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">specifying</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="mosel"> <span class="n" style="color: #333;">Calculate</span> <span class="n" style="color: #333;">virtual</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span><span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">property</span> <span class="n" style="color: #333;">is_chroma_subsampled</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">is_subsampled</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">attributes</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">methods</span> <span class="n" style="color: #333;">private</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.3.8</span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">MemoryError</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">RowsPerStrip</span> <span class="p">></span> <span class="n" style="color: #333;">ImageLength</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">SyntaxWarning</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3.8</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="mosel"> <span class="n" style="color: #333;">Fail</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="mosel"> <span class="n" style="color: #333;">Separate</span> <span class="k" style="font-weight: 600;">public</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">private</span> <span class="n" style="color: #333;">test</span> <span class="n" style="color: #333;">files</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">testing</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.2.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">fallback</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="mosel"> <span class="n" style="color: #333;">Simplify</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">sequences</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">iterators</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TiffPageSeries</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">interface</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="mosel"> <span class="n" style="color: #333;">Auto</span><span class="p">-</span><span class="n" style="color: #333;">detect</span> <span class="n" style="color: #333;">uniform</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">hash</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">determine</span> <span class="n" style="color: #333;">generic</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="mosel"> <span class="n" style="color: #333;">Turn</span> <span class="n" style="color: #333;">off</span> <span class="n" style="color: #333;">TiffPages</span> <span class="n" style="color: #333;">cache</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">through</span> <span class="n" style="color: #333;">more</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">movie</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">TiffFile</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">bigsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imwrite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="mosel"> <span class="n" style="color: #333;">Raise</span> <span class="n" style="color: #333;">TiffFileError</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">case</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">issues</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">structure</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">ome_metadata</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">XML</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">series</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">dimensions</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.2.10</span></span>
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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="mosel"> <span class="n" style="color: #333;">Assemble</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">memory</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">speed</span><span class="p">-</span><span class="n" style="color: #333;">up</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">slow</span> <span class="n" style="color: #333;">media</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="mosel"> <span class="n" style="color: #333;">Handle</span> <span class="n" style="color: #333;">discontinued</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">fastij</span><span class="p">,</span> <span class="n" style="color: #333;">multifile_close</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">black</span> <span class="n" style="color: #333;">background</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">datetime</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">default</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">SamplesPerPixel</span> <span class="p">></span> <span class="m" style="color: #099;">1.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">NDPI</span> <span class="p">(</span><span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span><span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">still</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">supported</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.4</span></span>
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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">deflate</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="mosel"> <span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">copyright</span> <span class="n" style="color: #333;">year</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.12.16</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">tables</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">NDPI</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">old</span><span class="p">-</span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">JPEG</span><span class="p">.</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="mosel"> <span class="n" style="color: #333;">Reorder</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">channel</span> <span class="n" style="color: #333;">axis</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">match</span> <span class="n" style="color: #333;">PlanarConfiguration</span> <span class="n" style="color: #333;">storage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">contiguous</span> <span class="n" style="color: #333;">arrays</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">decode_lzw</span> <span class="n" style="color: #333;">proxy</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">compatibility</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">old</span> <span class="n" style="color: #333;">czifile</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">dedicated</span> <span class="n" style="color: #333;">logger</span><span class="p">.</span></span>
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60
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<td class="diff-line-num new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
180
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.11.28</span></span>
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<td class="diff-line-num old old_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
61
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<td class="diff-line-num new_line old" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> Pass 2739 tests.</span>
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62
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<td class="diff-line-num new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
181
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">SubIFDs</span> <span class="n" style="color: #333;">accessible</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num old old_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
63
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<td class="diff-line-num new_line old" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext"> Make parsing of TiffSequence axes pattern optional (b<span class="idiff left right">ackward incompatible</span>).</span>
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<td class="diff-line-num new old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">optional</span> <span class="p">(</span><span class="n" style="color: #333;">b<span class="idiff left right">reaking</span></span><span class="p">).</span></span>
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<td class="diff-line-num old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
64
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<td class="diff-line-num new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
183
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="mosel"> <span class="n" style="color: #333;">Limit</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">names</span><span class="p">,</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">path</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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65
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<td class="diff-line-num new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
184
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">interpolate</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">dimensions</span> <span class="p"><=</span> <span class="m" style="color: #099;">512</span><span class="p">,</span> <span class="k" style="font-weight: 600;">else</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">bilinear</span><span class="p">.</span></span>
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66
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<td class="diff-line-num new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
185
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">logging</span><span class="p">.</span><span class="n" style="color: #333;">warning</span> <span class="n" style="color: #333;">instead</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span><span class="n" style="color: #333;">warn</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">cases</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
67
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<td class="diff-line-num new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">FutureWarning</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">out</span> <span class="p">==</span> <span class="s1" style="color: #d14;">'memmap'</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
68
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<td class="diff-line-num new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="mosel"> <span class="n" style="color: #333;">Adjust</span> <span class="n" style="color: #333;">ZSTD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">libtiff</span><span class="p">-</span><span class="m" style="color: #099;">4.0.10</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num old old_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
69
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<td class="diff-line-num new_line old" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> Decode old<span class="idiff left right"> </span>style LZW with imagecodecs >= 2018.11.8.</span>
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<td class="diff-line-num new old_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">old</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">LZW</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.11.8</span><span class="p">.</span></span>
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70
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<td class="diff-line-num new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">qptiff_metadata</span> <span class="p">(</span><span class="n" style="color: #333;">QPI</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">).</span></span>
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<td class="diff-line-num old_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
71
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<td class="diff-line-num new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">keyword</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">variable</span> <span class="n" style="color: #333;">positional</span> <span class="n" style="color: #333;">arguments</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
72
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<td class="diff-line-num new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">either</span> <span class="n" style="color: #333;">all</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">none</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">statements</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">expression</span><span class="p">.</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -75,323 +194,117 @@ Description: Read and write TIFF(r) files</td>
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75
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.11.6</span></span>
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76
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">imsave</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">imwrite</span><span class="p">.</span></span>
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77
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="mosel"> <span class="n" style="color: #333;">Readd</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">implementations</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">packints</span><span class="p">,</span> <span class="n" style="color: #333;">delta</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">bitorder</span> <span class="n" style="color: #333;">codecs</span><span class="p">.</span></span>
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<td class="diff-line-num old old_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> Fix TiffFrame.compression AttributeError<span class="idiff left right"> (bug fix)</span>.</span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">TiffFrame</span><span class="p">.</span><span class="n" style="color: #333;">compression</span> <span class="n" style="color: #333;">AttributeError</span><span class="p">.</span></span>
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79
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<td class="diff-line-num new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.10.18</span></span>
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80
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> Rename tiffile package to tifffile.</span>
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81
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext"> 2018.10.10</span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="plaintext"> Pass 2710 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
83
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> Read ZIF, the Zoomable Image Format (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
84
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="plaintext"> Decode YCbCr JPEG as RGB (tentative).</span>
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<td class="diff-line-num old old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="plaintext"> Improve restoration of incomplete tiles.</span>
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<td class="diff-line-num old old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
86
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> Allow to write grayscale with extrasamples without specifying planarconfig.</span>
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<td class="diff-line-num old old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
87
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext"> Enable decoding of PNG and JXR via imagecodecs.</span>
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<td class="diff-line-num old old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
88
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="plaintext"> Deprecate 32-bit platforms (too many memory errors during tests).</span>
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<td class="diff-line-num old old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
89
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext"> 2018.9.27</span>
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90
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext"> Read Olympus SIS (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> Allow to write non-BigTIFF files up to ~4 GB (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
92
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext"> Fix parsing date and time fields in SEM metadata (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
93
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="plaintext"> Detect some circular IFD references.</span>
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<td class="diff-line-num old old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
94
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> Enable WebP codecs via imagecodecs.</span>
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<td class="diff-line-num old old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
95
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext"> Add option to read TiffSequence from ZIP containers.</span>
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<td class="diff-line-num old old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
96
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="plaintext"> Remove TiffFile.isnative.</span>
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<td class="diff-line-num old old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
97
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="plaintext"> Move TIFF struct format constants out of TiffFile namespace.</span>
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98
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="plaintext"> 2018.8.31</span>
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<td class="diff-line-num old old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
99
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="plaintext"> Pass 2699 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
100
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="plaintext"> Fix wrong TiffTag.valueoffset (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
101
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="plaintext"> Towards reading Hamamatsu NDPI (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
102
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext"> Enable PackBits compression of byte and bool arrays.</span>
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<td class="diff-line-num old old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
103
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="plaintext"> Fix parsing NULL terminated CZ_SEM strings.</span>
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<td class="diff-line-num old old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
104
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> 2018.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
105
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext"> Move tifffile.py and related modules into tiffile package.</span>
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<td class="diff-line-num old old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
106
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC106" class="line" lang="plaintext"> Move usage examples to module docstring.</span>
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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
107
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext"> Enable multi-threading for compressed tiles and pages by default.</span>
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<td class="diff-line-num old old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
108
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext"> Add option to concurrently decode image tiles using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
109
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="plaintext"> Do not skip empty tiles (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
110
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="plaintext"> Read JPEG and J2K compressed strips and tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
111
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext"> Allow floating point predictor on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
112
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="plaintext"> Add option to specify subfiletype on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
113
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext"> Depend on imagecodecs package instead of _tifffile, lzma, etc modules.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
114
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext"> Remove reverse_bitorder, unpack_ints, and decode functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
115
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="plaintext"> Use pytest instead of unittest.</span>
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<td class="diff-line-num old old_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
116
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> 2018.6.20</span>
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<td class="diff-line-num old old_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
117
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext"> Save RGBA with unassociated extrasample by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
118
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="plaintext"> Add option to specify ExtraSamples values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
119
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="plaintext"> 2018.6.17</span>
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<td class="diff-line-num old old_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
120
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="plaintext"> Pass 2680 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
121
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="plaintext"> Towards reading JPEG and other compressions via imagecodecs package (WIP).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
122
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext"> Read SampleFormat VOID as UINT.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
123
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext"> Add function to validate TIFF using 'jhove -m TIFF-hul'.</span>
</pre>
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124
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="plaintext"> Save bool arrays as bilevel TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
125
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext"> Accept pathlib.Path as filenames.</span>
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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
126
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> Move 'software' argument from TiffWriter __init__ to save.</span>
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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
127
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<pre style="margin: 0;">-<span id="LC127" class="line" lang="plaintext"> Raise DOS limit to 16 TB.</span>
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<td class="diff-line-num old old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
128
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="plaintext"> Lazy load lzma and zstd compressors and decompressors.</span>
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<td class="diff-line-num old old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
129
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="plaintext"> Add option to save IJMetadata tags.</span>
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<td class="diff-line-num old old_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
130
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<pre style="margin: 0;">-<span id="LC130" class="line" lang="plaintext"> Return correct number of pages for truncated series (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
131
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="plaintext"> Move EXIF tags to TIFF.TAG as per TIFF/EP standard.</span>
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<td class="diff-line-num old old_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
132
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext"> 2018.2.18</span>
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<td class="diff-line-num old old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
133
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<pre style="margin: 0;">-<span id="LC133" class="line" lang="plaintext"> Pass 2293 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
134
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="plaintext"> Always save RowsPerStrip and Resolution tags as required by TIFF standard.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
135
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<pre style="margin: 0;">-<span id="LC135" class="line" lang="plaintext"> Do not use badly typed ImageDescription.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
136
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext"> Coherce bad ASCII string tags to bytes.</span>
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<td class="diff-line-num old old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
137
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="plaintext"> Tuning of __str__ functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
138
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="plaintext"> Fix reading 'undefined' tag values (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
139
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="plaintext"> Read and write ZSTD compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
140
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="plaintext"> Use hexdump to print byte strings.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
141
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="plaintext"> Determine TIFF byte order from data dtype in imsave.</span>
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<td class="diff-line-num old old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
142
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> Add option to specify RowsPerStrip for compressed strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
143
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext"> Allow memory-map of arrays with non-native byte order.</span>
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<td class="diff-line-num old old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
144
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext"> Attempt to handle ScanImage <= 5.1 files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
145
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext"> Restore TiffPageSeries.pages sequence interface.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
146
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext"> Use numpy.frombuffer instead of fromstring to read from binary data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
147
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext"> Parse GeoTIFF metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
148
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<pre style="margin: 0;">-<span id="LC148" class="line" lang="plaintext"> Add option to apply horizontal differencing before compression.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
149
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext"> Towards reading PerkinElmer QPI (QPTIFF, no test files).</span>
</pre>
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150
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="plaintext"> Do not index out of bounds data in tifffile.c unpackbits and decodelzw.</span>
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<td class="diff-line-num old old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
151
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="plaintext"> 2017.9.29 (tentative)</span>
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<td class="diff-line-num old old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
152
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext"> Many backward incompatible changes improving speed and resource usage:</span>
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<td class="diff-line-num old old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
153
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<pre style="margin: 0;">-<span id="LC153" class="line" lang="plaintext"> Pass 2268 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
154
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<pre style="margin: 0;">-<span id="LC154" class="line" lang="plaintext"> Add detail argument to __str__ function. Remove info functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
155
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext"> Fix potential issue correcting offsets of large LSM files with positions.</span>
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<td class="diff-line-num old old_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
156
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<pre style="margin: 0;">-<span id="LC156" class="line" lang="plaintext"> Remove TiffFile sequence interface; use TiffFile.pages instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
157
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC157" class="line" lang="plaintext"> Do not make tag values available as TiffPage attributes.</span>
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<td class="diff-line-num old old_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
158
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<pre style="margin: 0;">-<span id="LC158" class="line" lang="plaintext"> Use str (not bytes) type for tag and metadata strings (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
159
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="plaintext"> Use documented standard tag and value names (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
160
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<pre style="margin: 0;">-<span id="LC160" class="line" lang="plaintext"> Use enums for some documented TIFF tag values.</span>
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<td class="diff-line-num old old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
161
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> Remove 'memmap' and 'tmpfile' options; use out='memmap' instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
162
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> Add option to specify output in asarray functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
163
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext"> Add option to concurrently decode pages using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
164
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="plaintext"> Add TiffPage.asrgb function (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
165
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<pre style="margin: 0;">-<span id="LC165" class="line" lang="plaintext"> Do not apply colormap in asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
166
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="plaintext"> Remove 'colormapped', 'rgbonly', and 'scale_mdgel' options from asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
167
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<pre style="margin: 0;">-<span id="LC167" class="line" lang="plaintext"> Consolidate metadata in TiffFile _metadata functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
168
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="plaintext"> Remove non-tag metadata properties from TiffPage.</span>
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<td class="diff-line-num old old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
169
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="plaintext"> Add function to convert LSM to tiled BIN files.</span>
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<td class="diff-line-num old old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
170
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="plaintext"> Align image data in file.</span>
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<td class="diff-line-num old old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
171
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<pre style="margin: 0;">-<span id="LC171" class="line" lang="plaintext"> Make TiffPage.dtype a numpy.dtype.</span>
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<td class="diff-line-num old old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
172
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC172" class="line" lang="plaintext"> Add 'ndim' and 'size' properties to TiffPage and TiffPageSeries.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
173
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"> Allow imsave to write non-BigTIFF files up to ~4 GB.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
174
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> Only read one page for shaped series if possible.</span>
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<td class="diff-line-num old old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
175
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext"> Add memmap function to create memory-mapped array stored in TIFF file.</span>
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<td class="diff-line-num old old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
176
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<pre style="margin: 0;">-<span id="LC176" class="line" lang="plaintext"> Add option to save empty arrays to TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
177
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<pre style="margin: 0;">-<span id="LC177" class="line" lang="plaintext"> Add option to save truncated TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
178
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<pre style="margin: 0;">-<span id="LC178" class="line" lang="plaintext"> Allow single tile images to be saved contiguously.</span>
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<td class="diff-line-num old old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
179
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<pre style="margin: 0;">-<span id="LC179" class="line" lang="plaintext"> Add optional movie mode for files with uniform pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
180
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC180" class="line" lang="plaintext"> Lazy load pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
181
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC181" class="line" lang="plaintext"> Use lightweight TiffFrame for IFDs sharing properties with key TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
182
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC182" class="line" lang="plaintext"> Move module constants to 'TIFF' namespace (speed up module import).</span>
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<td class="diff-line-num old old_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
183
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext"> Remove 'fastij' option from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
184
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC184" class="line" lang="plaintext"> Remove 'pages' parameter from TiffFile.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
185
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="plaintext"> Remove TIFFfile alias.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
186
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="plaintext"> Deprecate Python 2.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
187
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="plaintext"> Require enum34 and futures packages on Python 2.7.</span>
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<td class="diff-line-num old old_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
188
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext"> Remove Record class and return all metadata as dict instead.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
189
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext"> Add functions to parse STK, MetaSeries, ScanImage, SVS, Pilatus metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
190
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext"> Read tags from EXIF and GPS IFDs.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
191
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="plaintext"> Use pformat for tag and metadata values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
192
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="plaintext"> Fix reading some UIC tags (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
193
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> Do not modify input array in imshow (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
194
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext"> Fix Python implementation of unpack_ints.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
195
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext"> 2017.5.23</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
196
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="plaintext"> Pass 1961 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
197
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC197" class="line" lang="plaintext"> Write correct number of SampleFormat values (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
198
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="plaintext"> Use Adobe deflate code to write ZIP compressed files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
199
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="plaintext"> Add option to pass tag values as packed binary data for writing.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
200
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> Defer tag validation to attribute access.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
201
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="plaintext"> Use property instead of lazyattr decorator for simple expressions.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
202
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="plaintext"> 2017.3.17</span>
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<td class="diff-line-num old old_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
203
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="plaintext"> Write IFDs and tag values on word boundaries.</span>
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<td class="diff-line-num old old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
204
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="plaintext"> Read ScanImage metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
205
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC205" class="line" lang="plaintext"> Remove is_rgb and is_indexed attributes from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
206
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC206" class="line" lang="plaintext"> Create files used by doctests.</span>
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<td class="diff-line-num old old_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
207
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC207" class="line" lang="plaintext"> 2017.1.12</span>
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<td class="diff-line-num old old_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
208
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext"> Read Zeiss SEM metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
209
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="plaintext"> Read OME-TIFF with invalid references to external files.</span>
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<td class="diff-line-num old old_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
210
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="plaintext"> Rewrite C LZW decoder (5x faster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
211
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext"> Read corrupted LSM files missing EOI code in LZW stream.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
212
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext"> 2017.1.1</span>
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<td class="diff-line-num old old_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
213
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="plaintext"> Add option to append images to existing TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
214
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="plaintext"> Read files without pages.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
215
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="plaintext"> Read S-FEG and Helios NanoLab tags created by FEI software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
216
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> Allow saving Color Filter Array (CFA) images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
217
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="plaintext"> Add info functions returning more information about TiffFile and TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
218
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> Add option to read specific pages only.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
219
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="plaintext"> Remove maxpages argument (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
220
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext"> Remove test_tifffile function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
221
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> 2016.10.28</span>
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<td class="diff-line-num old old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
222
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext"> Pass 1944 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
223
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="plaintext"> Improve detection of ImageJ hyperstacks.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
224
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC224" class="line" lang="plaintext"> Read TVIPS metadata created by EM-MENU (by Marco Oster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
225
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="plaintext"> Add option to disable using OME-XML metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
226
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC226" class="line" lang="plaintext"> Allow non-integer range attributes in modulo tags (by Stuart Berg).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
227
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="plaintext"> 2016.6.21</span>
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<td class="diff-line-num old old_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
228
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext"> Do not always memmap contiguous data in page series.</span>
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<td class="diff-line-num old old_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
229
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<pre style="margin: 0;">-<span id="LC229" class="line" lang="plaintext"> 2016.5.13</span>
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<td class="diff-line-num old old_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
230
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="plaintext"> Add option to specify resolution unit.</span>
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<td class="diff-line-num old old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
231
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="plaintext"> Write grayscale images with extra samples when planarconfig is specified.</span>
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<td class="diff-line-num old old_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
232
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="plaintext"> Do not write RGB color images with 2 samples.</span>
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<td class="diff-line-num old old_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
233
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<pre style="margin: 0;">-<span id="LC233" class="line" lang="plaintext"> Reorder TiffWriter.save keyword arguments (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
234
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext"> 2016.4.18</span>
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<td class="diff-line-num old old_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
235
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="plaintext"> Pass 1932 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
236
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext"> TiffWriter, imread, and imsave accept open binary file streams.</span>
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<td class="diff-line-num old old_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
237
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext"> 2016.04.13</span>
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<td class="diff-line-num old old_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
238
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<pre style="margin: 0;">-<span id="LC238" class="line" lang="plaintext"> Correctly handle reversed fill order in 2 and 4 bps images (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
239
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="plaintext"> Implement reverse_bitorder in C.</span>
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<td class="diff-line-num old old_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
240
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext"> 2016.03.18</span>
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<td class="diff-line-num old old_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
241
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC241" class="line" lang="plaintext"> Fix saving additional ImageJ metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
242
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="plaintext"> 2016.2.22</span>
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<td class="diff-line-num old old_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
243
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<pre style="margin: 0;">-<span id="LC243" class="line" lang="plaintext"> Pass 1920 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
244
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="plaintext"> Write 8 bytes double tag values using offset if necessary (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
245
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext"> Add option to disable writing second image description tag.</span>
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<td class="diff-line-num old old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
246
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="plaintext"> Detect tags with incorrect counts.</span>
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<td class="diff-line-num old old_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
247
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext"> Disable color mapping for LSM.</span>
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<td class="diff-line-num old old_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
248
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="plaintext"> 2015.11.13</span>
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<td class="diff-line-num old old_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
249
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext"> Read LSM 6 mosaics.</span>
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<td class="diff-line-num old old_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
250
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext"> Add option to specify directory of memory-mapped files.</span>
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<td class="diff-line-num old old_line" data-linenumber="251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
251
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="plaintext"> Add command line options to specify vmin and vmax values for colormapping.</span>
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<td class="diff-line-num old old_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
252
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="plaintext"> 2015.10.06</span>
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<td class="diff-line-num old old_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
253
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="plaintext"> New helper function to apply colormaps.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
254
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<pre style="margin: 0;">-<span id="LC254" class="line" lang="plaintext"> Renamed is_palette attributes to is_indexed (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="255" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
255
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC255" class="line" lang="plaintext"> Color-mapped samples are now contiguous (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
256
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="plaintext"> Do not color-map ImageJ hyperstacks (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
257
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext"> Towards reading Leica SCN.</span>
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<td class="diff-line-num old old_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
258
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="plaintext"> 2015.9.25</span>
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<td class="diff-line-num old old_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
259
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="plaintext"> Read images with reversed bit order (FillOrder is LSB2MSB).</span>
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<td class="diff-line-num old old_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
260
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="plaintext"> 2015.9.21</span>
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<td class="diff-line-num old old_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
261
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="plaintext"> Read RGB OME-TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
262
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="plaintext"> Warn about malformed OME-XML.</span>
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<td class="diff-line-num old old_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
263
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC263" class="line" lang="plaintext"> 2015.9.16</span>
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<td class="diff-line-num old old_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
264
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="plaintext"> Detect some corrupted ImageJ metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
265
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext"> Better axes labels for 'shaped' files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
266
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="plaintext"> Do not create TiffTag for default values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
267
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="plaintext"> Chroma subsampling is not supported.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
268
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="plaintext"> Memory-map data in TiffPageSeries if possible (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
269
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="plaintext"> 2015.8.17</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
270
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="plaintext"> Pass 1906 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
271
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC271" class="line" lang="plaintext"> Write ImageJ hyperstacks (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
272
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC272" class="line" lang="plaintext"> Read and write LZMA compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
273
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext"> Specify datetime when saving (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
274
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC274" class="line" lang="plaintext"> Save tiled and color-mapped images (optional).</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
275
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC275" class="line" lang="plaintext"> Ignore void bytecounts and offsets if possible.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
276
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC276" class="line" lang="plaintext"> Ignore bogus image_depth tag created by ISS Vista software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
277
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC277" class="line" lang="plaintext"> Decode floating point horizontal differencing (not tiled).</span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
278
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC278" class="line" lang="plaintext"> Save image data contiguously if possible.</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
279
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC279" class="line" lang="plaintext"> Only read first IFD from ImageJ files if possible.</span>
</pre>
</td>
</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
280
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC280" class="line" lang="plaintext"> Read ImageJ 'raw' format (files larger than 4 GB).</span>
</pre>
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</tr>
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<td class="diff-line-num old old_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
281
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC281" class="line" lang="plaintext"> TiffPageSeries class for pages with compatible shape and data type.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
282
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="plaintext"> Try to read incomplete tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
283
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC283" class="line" lang="plaintext"> Open file dialog if no filename is passed on command line.</span>
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<td class="diff-line-num old old_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
284
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="plaintext"> Ignore errors when decoding OME-XML.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
285
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC285" class="line" lang="plaintext"> Rename decoder functions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
286
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC286" class="line" lang="plaintext"> 2014.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
287
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC287" class="line" lang="plaintext"> TiffWriter class for incremental writing images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
288
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC288" class="line" lang="plaintext"> Simplify examples.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
289
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="plaintext"> 2014.8.19</span>
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<td class="diff-line-num old old_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
290
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="plaintext"> Add memmap function to FileHandle.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
291
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="plaintext"> Add function to determine if image data in TiffPage is memory-mappable.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
292
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="plaintext"> Do not close files if multifile_close parameter is False.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
293
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC293" class="line" lang="plaintext"> 2014.8.10</span>
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<td class="diff-line-num old old_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
294
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="plaintext"> Pass 1730 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
295
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="plaintext"> Return all extrasamples by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
296
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="plaintext"> Read data from series of pages into memory-mapped array (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
297
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="plaintext"> Squeeze OME dimensions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
298
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="plaintext"> Workaround missing EOI code in strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
299
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> Support image and tile depth tags (SGI extension).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
300
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="plaintext"> Better handling of STK/UIC tags (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
301
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC301" class="line" lang="plaintext"> Disable color mapping for STK.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
302
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="plaintext"> Julian to datetime converter.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
303
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC303" class="line" lang="plaintext"> TIFF ASCII type may be NULL separated.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
304
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="plaintext"> Unwrap strip offsets for LSM files greater than 4 GB.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
305
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC305" class="line" lang="plaintext"> Correct strip byte counts in compressed LSM files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
306
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC306" class="line" lang="plaintext"> Skip missing files in OME series.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
307
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="plaintext"> Read embedded TIFF files.</span>
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<td class="diff-line-num old old_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
308
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="plaintext"> 2014.2.05</span>
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<td class="diff-line-num old old_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
309
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="plaintext"> Save rational numbers as type 5 (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
310
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="plaintext"> 2013.12.20</span>
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<td class="diff-line-num old old_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
311
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<pre style="margin: 0;">-<span id="LC311" class="line" lang="plaintext"> Keep other files in OME multi-file series closed.</span>
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<td class="diff-line-num old old_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
312
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="plaintext"> FileHandle class to abstract binary file handle.</span>
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<td class="diff-line-num old old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
313
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext"> Disable color mapping for bad OME-TIFF produced by bio-formats.</span>
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<td class="diff-line-num old old_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
314
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="plaintext"> Read bad OME-XML produced by ImageJ when cropping.</span>
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<td class="diff-line-num old old_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
315
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="plaintext"> 2013.11.3</span>
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<td class="diff-line-num old old_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
316
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="plaintext"> Allow zlib compress data in imsave function (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
317
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="plaintext"> Memory-map contiguous image data (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
318
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="plaintext"> 2013.10.28</span>
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<td class="diff-line-num old old_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
319
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext"> Read MicroManager metadata and little-endian ImageJ tag.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
320
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="plaintext"> Save extra tags in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
321
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<pre style="margin: 0;">-<span id="LC321" class="line" lang="plaintext"> Save tags in ascending order by code (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
322
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="plaintext"> 2012.10.18</span>
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<td class="diff-line-num old old_line" data-linenumber="323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
323
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<pre style="margin: 0;">-<span id="LC323" class="line" lang="plaintext"> Accept file like objects (read from OIB files).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
324
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<pre style="margin: 0;">-<span id="LC324" class="line" lang="plaintext"> 2012.8.21</span>
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<td class="diff-line-num old old_line" data-linenumber="325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
325
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC325" class="line" lang="plaintext"> Rename TIFFfile to TiffFile and TIFFpage to TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
326
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC326" class="line" lang="plaintext"> TiffSequence class for reading sequence of TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
327
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC327" class="line" lang="plaintext"> Read UltraQuant tags.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
328
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC328" class="line" lang="plaintext"> Allow float numbers as resolution in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
329
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC329" class="line" lang="plaintext"> 2012.8.3</span>
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<td class="diff-line-num old old_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
330
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC330" class="line" lang="plaintext"> Read MD GEL tags and NIH Image header.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
331
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC331" class="line" lang="plaintext"> 2012.7.25</span>
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<td class="diff-line-num old old_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
332
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC332" class="line" lang="plaintext"> Read ImageJ tags.</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
333
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<td class="diff-line-num new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="mosel"> <span class="p">...</span></span>
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334
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="mosel"> </span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="mosel"> <span class="n" style="color: #333;">Refer</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">CHANGES</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">older</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="mosel"> </span>
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335
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203
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="mosel"> <span class="n" style="color: #333;">Notes</span></span>
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336
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204
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="mosel"> <span class="p">-----</span></span>
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337
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205
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">API</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stable</span> <span class="n" style="color: #333;">yet</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">change</span> <span class="n" style="color: #333;">between</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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338
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206
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="mosel"> </span>
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339
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<td class="diff-line-num new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
207
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="mosel"> <span class="n" style="color: #333;">Tested</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">little</span><span class="p">-</span><span class="n" style="color: #333;">endian</span> <span class="n" style="color: #333;">platforms</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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340
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208
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="mosel"> </span>
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341
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<pre style="margin: 0;">-<span id="LC341" class="line" lang="plaintext"> Python 2.7, 3.4, and 32-bit versions are deprecated.</span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="mosel"> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">deprecated</span><span class="p">.</span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="mosel"> </span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="mosel"> <span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">pip</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">setuptools</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">latest</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">installing</span> <span class="n" style="color: #333;">tifffile</span><span class="p">:</span></span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="mosel"> </span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="mosel"> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">install</span> <span class="p">--</span><span class="n" style="color: #333;">upgrade</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">setuptools</span><span class="p">``</span></span>
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214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">relies</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">the</span> <span class="p">`</span><span class="n" style="color: #333;">imagecodecs</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="mosel"> </span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="mosel"> <span class="n" style="color: #333;">Several</span> <span class="n" style="color: #333;">TIFF</span><span class="p">-</span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">formats</span> <span class="k" style="font-weight: 600;">do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">strictly</span> <span class="n" style="color: #333;">adhere</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF6</span> <span class="n" style="color: #333;">specification</span><span class="p">,</span></span>
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219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="mosel"> <span class="n" style="color: #333;">some</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">sizes</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">exceed</span> <span class="n" style="color: #333;">the</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">limit</span><span class="p">:</span></span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">BigTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">identified</span> <span class="n" style="color: #333;">by</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">number</span> <span class="m" style="color: #099;">43</span> <span class="k" style="font-weight: 600;">and</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">different</span> <span class="n" style="color: #333;">file</span></span>
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<td class="diff-line-num new new_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="mosel"> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span> <span class="k" style="font-weight: 600;">with</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span> <span class="n" style="color: #333;">It</span> <span class="n" style="color: #333;">adds</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ImageJ</span><span class="p">*</span> <span class="n" style="color: #333;">hyperstacks</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">exceed</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">,</span></span>
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<td class="diff-line-num new new_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span> <span class="n" style="color: #333;">Files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">contain</span> <span class="n" style="color: #333;">one</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">size</span> <span class="p">(</span><span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">6</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span></span>
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<td class="diff-line-num new new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="mosel"> <span class="n" style="color: #333;">determined</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">Latin</span><span class="p">-</span><span class="m" style="color: #099;">1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="mosel"> <span class="n" style="color: #333;">encoded</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstacks</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
229
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">one</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">BigTIFF</span></span>
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<td class="diff-line-num new new_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="mosel"> <span class="n" style="color: #333;">files</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">UTF</span><span class="p">-</span><span class="m" style="color: #099;">8</span> <span class="n" style="color: #333;">encoded</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">found</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span></span>
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<td class="diff-line-num new new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="mosel"> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">defines</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">position</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">high</span></span>
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<td class="diff-line-num new new_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="mosel"> <span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="n" style="color: #333;">except</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span></span>
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<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
233
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="mosel"> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">LSM</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">IFDs</span> <span class="n" style="color: #333;">below</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">wraps</span> <span class="n" style="color: #333;">around</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">StripOffsets</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">position</span> <span class="n" style="color: #333;">require</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">unwrapping</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
236
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">contains</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">bytes</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">uncompressed</span></span>
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237
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="mosel"> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">NDPI</span><span class="p">*</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">some</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="mosel"> <span class="n" style="color: #333;">Tag</span> <span class="n" style="color: #333;">values</span><span class="p">/</span><span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">corrected</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">high</span> <span class="n" style="color: #333;">bits</span> <span class="n" style="color: #333;">stored</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">IFD</span></span>
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<td class="diff-line-num new new_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="mosel"> <span class="n" style="color: #333;">structures</span><span class="p">.</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">dimensions</span> <span class="p">></span> <span class="m" style="color: #099;">65536</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">readable</span></span>
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<td class="diff-line-num new new_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">libjpeg</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">NDPI</span> <span class="n" style="color: #333;">files</span> <span class="p"><</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decompress</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span></span>
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<td class="diff-line-num new new_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="mosel"> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">library</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Windows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
243
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ScanImage</span><span class="p">*</span> <span class="n" style="color: #333;">optionally</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">corrupt</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">values</span></span>
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<td class="diff-line-num new new_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
244
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">recovered</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">constant</span></span>
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<td class="diff-line-num new new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
245
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="mosel"> <span class="n" style="color: #333;">differences</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">IFD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="n" style="color: #333;">throughout</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">such</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span></span>
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<td class="diff-line-num new new_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">GeoTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">strip</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tile</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">byte</span> <span class="n" style="color: #333;">counts</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="m" style="color: #099;">0.</span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="mosel"> <span class="n" style="color: #333;">Such</span> <span class="n" style="color: #333;">segments</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">implicitly</span> <span class="k" style="font-weight: 600;">set</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">0</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">NODATA</span> <span class="n" style="color: #333;">value</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">reading</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC251" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC252" class="line" lang="mosel"> <span class="n" style="color: #333;">Other</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">scientific</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Python</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC253" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC345" class="line" lang="plaintext"> * `Python-bioformats <https://github.com/CellProfiler/python-bioformats>`_</span>
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<pre style="margin: 0;">-<span id="LC346" class="line" lang="plaintext"> * `Imread <https://github.com/luispedro/imread>`_</span>
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347
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<pre style="margin: 0;">-<span id="LC347" class="line" lang="plaintext"> * `GDAL <https://github.com/OSGeo/gdal/tree/master/gdal/swig/python>`_</span>
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<pre style="margin: 0;">-<span id="LC348" class="line" lang="plaintext"> * `OpenSlide-python <https://github.com/openslide/openslide-python>`_</span>
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<pre style="margin: 0;">-<span id="LC349" class="line" lang="plaintext"> * `PyLibTiff <https://github.com/pearu/pylibtiff>`_</span>
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350
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<pre style="margin: 0;">-<span id="LC350" class="line" lang="plaintext"> * `SimpleITK <http://www.simpleitk.org>`_</span>
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351
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<pre style="margin: 0;">-<span id="LC351" class="line" lang="plaintext"> * `PyLSM <https://launchpad.net/pylsm>`_</span>
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352
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<pre style="margin: 0;">-<span id="LC352" class="line" lang="plaintext"> * `PyMca.TiffIO.py <https://github.com/vasole/pymca>`_ (same as fabio.TiffIO)</span>
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353
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<pre style="margin: 0;">-<span id="LC353" class="line" lang="plaintext"> * `BioImageXD.Readers <http://www.bioimagexd.net/>`_</span>
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<pre style="margin: 0;">-<span id="LC354" class="line" lang="plaintext"> * `Cellcognition.io <http://cellcognition.org/>`_</span>
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<pre style="margin: 0;">-<span id="LC355" class="line" lang="plaintext"> * `pymimage <https://github.com/ardoi/pymimage>`_</span>
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<pre style="margin: 0;">-<span id="LC356" class="line" lang="plaintext"> * `pytiff <https://github.com/FZJ-INM1-BDA/pytiff>`_</span>
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<pre style="margin: 0;">-<span id="LC357" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">-<span id="LC358" class="line" lang="plaintext"> Acknowledgements</span>
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359
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<pre style="margin: 0;">-<span id="LC359" class="line" lang="plaintext"> ----------------</span>
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<pre style="margin: 0;">-<span id="LC360" class="line" lang="plaintext"> * Egor Zindy, University of Manchester, for lsm_scan_info specifics.</span>
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361
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<pre style="margin: 0;">-<span id="LC361" class="line" lang="plaintext"> * Wim Lewis for a bug fix and some LSM functions.</span>
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362
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<pre style="margin: 0;">-<span id="LC362" class="line" lang="plaintext"> * Hadrien Mary for help on reading MicroManager files.</span>
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<pre style="margin: 0;">-<span id="LC363" class="line" lang="plaintext"> * Christian Kliche for help writing tiled and color-mapped files.</span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">CellProfiler</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imread</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">luispedro</span><span class="p">/</span><span class="n" style="color: #333;">imread</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">GDAL</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">OSGeo</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">tree</span><span class="p">/</span><span class="n" style="color: #333;">master</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">swig</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">OpenSlide</span><span class="p">-</span><span class="n" style="color: #333;">python</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLibTiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">pearu</span><span class="p">/</span><span class="n" style="color: #333;">pylibtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">SimpleITK</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLSM</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">launchpad</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">pylsm</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyMca</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">.</span><span class="n" style="color: #333;">py</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vasole</span><span class="p">/</span><span class="n" style="color: #333;">pymca</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">same</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fabio</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">BioImageXD</span><span class="p">.</span><span class="n" style="color: #333;">Readers</span> <span class="p"><</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">bioimagexd</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CellCognition</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">cellcognition</span><span class="p">-</span><span class="n" style="color: #333;">project</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pymimage</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">ardoi</span><span class="p">/</span><span class="n" style="color: #333;">pymimage</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pytiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">FZJ</span><span class="p">-</span><span class="n" style="color: #333;">INM1</span><span class="p">-</span><span class="n" style="color: #333;">BDA</span><span class="p">/</span><span class="n" style="color: #333;">pytiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">ScanImageTiffReaderPython</span></span>
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<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gitlab</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vidriotech</span><span class="p">/</span><span class="n" style="color: #333;">scanimagetiffreader</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">bigtiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">bigtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="mosel"> <span class="n" style="color: #333;">Some</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">tifffile</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">:</span></span>
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271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">Apeer</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">library</span></span>
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">micro</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">ometiff</span><span class="p">-</span><span class="n" style="color: #333;">library</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Allen</span> <span class="n" style="color: #333;">Institute</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Cell</span> <span class="n" style="color: #333;">Science</span> <span class="n" style="color: #333;">imageio</span></span>
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">aicsimageio</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="mosel"> <span class="n" style="color: #333;">References</span></span>
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="mosel"> <span class="p">----------</span></span>
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<pre style="margin: 0;">-<span id="LC367" class="line" lang="plaintext"> 1<span class="idiff left right">)</span> TIFF 6.0 Specification and Supplements. Adobe Systems Incorporated.</span>
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="mosel"> <span class="m" style="color: #099;">1<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">Specification</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Supplements</span><span class="p">.</span> <span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">adobe</span><span class="p">.</span><span class="n" style="color: #333;">io</span><span class="p">/</span><span class="n" style="color: #333;">open</span><span class="p">/</span><span class="n" style="color: #333;">standards</span><span class="p">/</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;">-<span id="LC369" class="line" lang="plaintext"> 2<span class="idiff left right">)</span> TIFF File Format FAQ. https://www.awaresystems.be/imaging/tiff/faq.html</span>
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<pre style="margin: 0;">-<span id="LC370" class="line" lang="plaintext"> 3<span class="idiff left right">)</span> MetaMorph Stack (STK) Image File Format.</span>
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="mosel"> <span class="m" style="color: #099;">2<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">FAQ</span><span class="p">.</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">awaresystems</span><span class="p">.</span><span class="n" style="color: #333;">be</span><span class="p">/</span><span class="n" style="color: #333;">imaging</span><span class="p">/</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span><span class="n" style="color: #333;">faq</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="mosel"> <span class="m" style="color: #099;">3<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">MetaMorph</span> <span class="n" style="color: #333;">Stack</span> <span class="p">(</span><span class="n" style="color: #333;">STK</span><span class="p">)</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">.</span></span>
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371
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<pre style="margin: 0;"> <span id="LC283" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">mdc</span><span class="p">.</span><span class="n" style="color: #333;">custhelp</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">app</span><span class="p">/</span><span class="n" style="color: #333;">answers</span><span class="p">/</span><span class="n" style="color: #333;">detail</span><span class="p">/</span><span class="n" style="color: #333;">a_id</span><span class="p">/</span><span class="m" style="color: #099;">18862</span></span>
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<pre style="margin: 0;">-<span id="LC372" class="line" lang="plaintext"> 4<span class="idiff left right">)</span> Image File Format Description LSM 5/7 Release 6.0 (ZEN 2010).</span>
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284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="mosel"> <span class="m" style="color: #099;">4<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">Description</span> <span class="n" style="color: #333;">LSM</span> <span class="m" style="color: #099;">5</span><span class="p">/</span><span class="m" style="color: #099;">7</span> <span class="n" style="color: #333;">Release</span> <span class="m" style="color: #099;">6.0</span> <span class="p">(</span><span class="n" style="color: #333;">ZEN</span> <span class="m" style="color: #099;">2010</span><span class="p">).</span></span>
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<pre style="margin: 0;"> <span id="LC285" class="line" lang="mosel"> <span class="n" style="color: #333;">Carl</span> <span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">MicroImaging</span> <span class="n" style="color: #333;">GmbH</span><span class="p">.</span> <span class="n" style="color: #333;">BioSciences</span><span class="p">.</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">10</span><span class="p">,</span> <span class="m" style="color: #099;">2011</span></span>
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374
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<pre style="margin: 0;">-<span id="LC374" class="line" lang="plaintext"> 5<span class="idiff left right">)</span> The OME-TIFF format.</span>
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="mosel"> <span class="m" style="color: #099;">5<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">format</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC287" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">docs</span><span class="p">.</span><span class="n" style="color: #333;">openmicroscopy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="k" style="font-weight: 600;">model</span><span class="p">/</span><span class="m" style="color: #099;">5.6.4</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span></span>
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<pre style="margin: 0;">-<span id="LC376" class="line" lang="plaintext"> 6<span class="idiff left right">)</span> UltraQuant(r) Version 6.0 for Windows Start-Up Guide.</span>
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="mosel"> <span class="m" style="color: #099;">6<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">UltraQuant</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">)</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Windows</span> <span class="n" style="color: #333;">Start</span><span class="p">-</span><span class="n" style="color: #333;">Up</span> <span class="n" style="color: #333;">Guide</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC289" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">ultralum</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">images</span><span class="p">%</span><span class="m" style="color: #099;">20ul</span><span class="n" style="color: #333;">tralum</span><span class="p">/</span><span class="n" style="color: #333;">pdf</span><span class="p">/</span><span class="n" style="color: #333;">UQStart</span><span class="p">%</span><span class="m" style="color: #099;">20U</span><span class="n" style="color: #333;">p</span><span class="p">%</span><span class="m" style="color: #099;">20</span><span class="n" style="color: #333;">Guide</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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<pre style="margin: 0;">-<span id="LC378" class="line" lang="plaintext"> 7<span class="idiff left right">)</span> Micro-Manager File Formats.</span>
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="mosel"> <span class="m" style="color: #099;">7<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
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379
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">micro</span><span class="p">-</span><span class="n" style="color: #333;">manager</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager_File_Formats</span></span>
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<pre style="margin: 0;">-<span id="LC380" class="line" lang="plaintext"> 8<span class="idiff left right">)</span> Tags for TIFF and Related Specifications. Digital Preservation.</span>
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="mosel"> <span class="m" style="color: #099;">8<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Tags</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Related</span> <span class="n" style="color: #333;">Specifications</span><span class="p">.</span> <span class="n" style="color: #333;">Digital</span> <span class="n" style="color: #333;">Preservation</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">.</span><span class="n" style="color: #333;">gov</span><span class="p">/</span><span class="n" style="color: #333;">preservation</span><span class="p">/</span><span class="n" style="color: #333;">digital</span><span class="p">/</span><span class="n" style="color: #333;">formats</span><span class="p">/</span><span class="n" style="color: #333;">content</span><span class="p">/</span><span class="n" style="color: #333;">tiff_tags</span><span class="p">.</span><span class="n" style="color: #333;">shtml</span></span>
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<pre style="margin: 0;">-<span id="LC382" class="line" lang="plaintext"> 9<span class="idiff left right">)</span> ScanImage BigTiff Specification - ScanImage 2016.</span>
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294
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="mosel"> <span class="m" style="color: #099;">9<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">BigTiff</span> <span class="n" style="color: #333;">Specification</span> <span class="p">-</span> <span class="n" style="color: #333;">ScanImage</span> <span class="m" style="color: #099;">2016.</span></span>
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383
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295
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">scanimage</span><span class="p">.</span><span class="n" style="color: #333;">vidriotechnologies</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">display</span><span class="p">/</span><span class="n" style="color: #333;">SI2016</span><span class="p">/</span></span>
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384
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296
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="mosel"> <span class="n" style="color: #333;">ScanImage</span><span class="p">+</span><span class="n" style="color: #333;">BigTiff</span><span class="p">+</span><span class="n" style="color: #333;">Specification</span></span>
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385
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<pre style="margin: 0;">-<span id="LC385" class="line" lang="plaintext"> 10<span class="idiff left right">)</span> CIPA DC-008-2016: Exchangeable image file format for digital still cameras:</span>
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<td class="diff-line-num new old_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
297
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="mosel"> <span class="m" style="color: #099;">10<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">CIPA</span> <span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">:</span> <span class="n" style="color: #333;">Exchangeable</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">digital</span> <span class="n" style="color: #333;">still</span> <span class="n" style="color: #333;">cameras</span><span class="p">:</span></span>
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386
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298
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="mosel"> <span class="n" style="color: #333;">Exif</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">2.31</span><span class="p">.</span></span>
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387
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299
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cipa</span><span class="p">.</span><span class="n" style="color: #333;">jp</span><span class="p">/</span><span class="n" style="color: #333;">std</span><span class="p">/</span><span class="n" style="color: #333;">documents</span><span class="p">/</span><span class="n" style="color: #333;">e</span><span class="p">/</span><span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="n" style="color: #333;">Translation</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">-</span><span class="n" style="color: #333;">E</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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388
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<pre style="margin: 0;">-<span id="LC388" class="line" lang="plaintext"> 11) ZIF, the Zoomable Image File format. http://zif.photo/</span>
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<pre style="margin: 0;">+<span id="LC300" class="line" lang="mosel"> <span class="m" style="color: #099;">11.</span> <span class="n" style="color: #333;">ZIF</span><span class="p">,</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Zoomable</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">format</span><span class="p">.</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">zif</span><span class="p">.</span><span class="n" style="color: #333;">photo</span><span class="p">/</span></span>
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="mosel"> <span class="m" style="color: #099;">12.</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gdal</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">drivers</span><span class="p">/</span><span class="n" style="color: #333;">raster</span><span class="p">/</span><span class="n" style="color: #333;">gtiff</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="mosel"> <span class="n" style="color: #333;">Examples</span></span>
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304
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<pre style="margin: 0;"> <span id="LC304" class="line" lang="mosel"> <span class="p">--------</span></span>
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392
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305
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<pre style="margin: 0;"> <span id="LC305" class="line" lang="mosel"> <span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="m" style="color: #099;">3</span><span class="n" style="color: #333;">D</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC394" class="line" lang="plaintext"> >>> data = numpy.random.randint(0, 2**1<span class="idiff left right">6</span>, (4, 301, 219), 'uint16')</span>
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">**</span><span class="m" style="color: #099;">1<span class="idiff left right">2</span></span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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309
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">whole</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -402,7 +315,7 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image_stack</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;"> <span id="LC316" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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404
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<pre style="margin: 0;"> <span id="LC317" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC405" class="line" lang="plaintext"> Read the image from <span class="idiff left right">first page (IFD) in the TIFF file</span>:</span>
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;"><span class="idiff left">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">in</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">file</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">as</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">numpy</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff right">array</span></span><span class="p">:</span></span>
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406
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<pre style="margin: 0;"> <span id="LC319" class="line" lang="mosel"> </span>
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407
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<pre style="margin: 0;"> <span id="LC320" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC321" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -424,14 +337,36 @@ Description: Read and write TIFF(r) files</td>
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424
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<pre style="margin: 0;"> <span id="LC337" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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425
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338
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<pre style="margin: 0;"> <span id="LC338" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'axes'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'TZCYX'</span><span class="p">})</span></span>
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426
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339
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<pre style="margin: 0;"> <span id="LC339" class="line" lang="mosel"> </span>
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427
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<pre style="margin: 0;">-<span id="LC427" class="line" lang="plaintext"> Save a volume with xyz voxel size 2.6755x2.6755x3.9474 µm^3 to ImageJ file:</span>
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="mosel"> <span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">volume</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">xyz</span> <span class="n" style="color: #333;">voxel</span> <span class="n" style="color: #333;">size</span> <span class="m" style="color: #099;">2.6755</span><span class="n" style="color: #333;">x2</span><span class="m" style="color: #099;">.6755</span><span class="n" style="color: #333;">x3</span><span class="m" style="color: #099;">.9474</span> <span class="n" style="color: #333;">micron</span><span class="p">^</span><span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">ImageJ</span></span>
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="mosel"> <span class="n" style="color: #333;">formatted</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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428
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342
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<pre style="margin: 0;"> <span id="LC342" class="line" lang="mosel"> </span>
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429
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343
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<pre style="margin: 0;"> <span id="LC343" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">volume</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randn</span><span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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430
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344
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<pre style="margin: 0;"> <span id="LC344" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">volume</span><span class="p">.</span><span class="n" style="color: #333;">shape</span> <span class="p">=</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">1</span> <span class="p">#</span> <span class="n" style="color: #333;">dimensions</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TZCYXS</span> <span class="n" style="color: #333;">order</span></span>
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431
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<pre style="margin: 0;"> <span id="LC345" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">volume</span><span class="p">,</span> <span class="n" style="color: #333;">imagej</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">,</span> <span class="n" style="color: #333;">resolution</span><span class="p">=(</span><span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">,</span> <span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">),</span></span>
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432
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346
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<pre style="margin: 0;"> <span id="LC346" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'spacing'</span><span class="p">:</span> <span class="m" style="color: #099;">3.947368</span><span class="p">,</span> <span class="s1" style="color: #d14;">'unit'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'um'</span><span class="p">})</span></span>
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433
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347
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<pre style="margin: 0;"> <span id="LC347" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC434" class="line" lang="plaintext"> Read hyperstack and metadata from ImageJ file:</span>
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348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="mosel"> <span class="n" style="color: #333;">Get</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">volume</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tif</span> <span class="p">=</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">len</span><span class="p">(</span><span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">)</span> <span class="p">#</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span></span>
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="mosel"> <span class="m" style="color: #099;">57</span></span>
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span></span>
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'YX'</span></span>
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">series</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span></span>
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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363
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<pre style="margin: 0;">+<span id="LC363" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;">+<span id="LC364" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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366
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'ZYX'</span></span>
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<pre style="margin: 0;">+<span id="LC367" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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368
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="mosel"> </span>
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369
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">hyperstack</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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435
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370
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<pre style="margin: 0;"> <span id="LC370" class="line" lang="mosel"> </span>
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436
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371
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<pre style="margin: 0;"> <span id="LC371" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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437
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372
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<pre style="margin: 0;"> <span id="LC372" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">imagej_hyperstack</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -441,35 +376,58 @@ Description: Read and write TIFF(r) files</td>
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441
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376
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<pre style="margin: 0;"> <span id="LC376" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imagej_metadata</span><span class="p">[</span><span class="s1" style="color: #d14;">'slices'</span><span class="p">]</span></span>
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442
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377
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<pre style="margin: 0;"> <span id="LC377" class="line" lang="mosel"> <span class="m" style="color: #099;">57</span></span>
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443
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378
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<pre style="margin: 0;"> <span id="LC378" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
379
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="s2" style="color: #d14;">"XResolution"</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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380
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
381
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<pre style="margin: 0;">+<span id="LC381" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
382
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<pre style="margin: 0;">+<span id="LC382" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tag</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">].</span><span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s1" style="color: #d14;">'XResolution'</span><span class="p">]</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">2000</span><span class="p">,</span> <span class="m" style="color: #099;">5351</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
385
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<pre style="margin: 0;">+<span id="LC385" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span></span>
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<td class="diff-line-num new new_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
386
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'XResolution'</span></span>
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387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">code</span></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="mosel"> <span class="m" style="color: #099;">282</span></span>
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<td class="diff-line-num new new_line" data-linenumber="389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="k" style="font-weight: 600;">count</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="mosel"> <span class="m" style="color: #099;">1</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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392
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<pre style="margin: 0;">+<span id="LC392" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'2I'</span></span>
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393
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<pre style="margin: 0;">+<span id="LC393" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
394
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<pre style="margin: 0;">+<span id="LC394" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">selected</span> <span class="k" style="font-weight: 600;">range</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
395
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<pre style="margin: 0;">+<span id="LC395" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
396
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<pre style="margin: 0;">+<span id="LC396" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">40</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC397" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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398
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<pre style="margin: 0;">+<span id="LC398" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">18</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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399
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<pre style="margin: 0;">+<span id="LC399" class="line" lang="mosel"> </span>
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444
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400
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<pre style="margin: 0;"> <span id="LC400" class="line" lang="mosel"> <span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">empty</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mapped</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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445
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401
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<pre style="margin: 0;"> <span id="LC401" class="line" lang="mosel"> </span>
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446
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402
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<pre style="margin: 0;"> <span id="LC402" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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447
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<td class="diff-line-num new_line" data-linenumber="403" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
403
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<pre style="margin: 0;"> <span id="LC403" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span> <span class="p">=</span> <span class="m" style="color: #099;">1.0</span></span>
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448
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404
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<pre style="margin: 0;"> <span id="LC404" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">.</span><span class="n" style="color: #333;">flush</span><span class="p">()</span></span>
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449
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<pre style="margin: 0;">-<span id="LC449" class="line" lang="plaintext"> >>> memmap_image.shape, memmap_image.dtype</span>
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450
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<pre style="margin: 0;">-<span id="LC450" class="line" lang="plaintext"> ((256, 256), dtype('float32'))</span>
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451
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405
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<pre style="margin: 0;"> <span id="LC405" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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452
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406
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<pre style="margin: 0;"> <span id="LC406" class="line" lang="mosel"> </span>
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453
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<pre style="margin: 0;">-<span id="LC453" class="line" lang="plaintext"> Memory-map image data in the TIFF file:</span>
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407
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<pre style="margin: 0;">+<span id="LC407" class="line" lang="mosel"> <span class="n" style="color: #333;">Memory</span><span class="p">-</span><span class="n" style="color: #333;">map</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;"><span class="idiff left">of</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff right"> </span><span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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454
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408
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<pre style="margin: 0;"> <span id="LC408" class="line" lang="mosel"> </span>
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409
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<pre style="margin: 0;"> <span id="LC409" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">page</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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456
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410
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span></span>
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457
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411
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<pre style="margin: 0;"> <span id="LC411" class="line" lang="mosel"> <span class="m" style="color: #099;">1.0</span></span>
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458
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412
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<pre style="margin: 0;"> <span id="LC412" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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459
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413
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<pre style="margin: 0;"> <span id="LC413" class="line" lang="mosel"> </span>
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460
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<pre style="margin: 0;">-<span id="LC460" class="line" lang="plaintext"> Successively append images to a BigTIFF file:</span>
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414
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<pre style="margin: 0;">+<span id="LC414" class="line" lang="mosel"> <span class="n" style="color: #333;">Successively</span> <span class="n" style="color: #333;">append</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">file</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">which</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">can</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">exceed</span></span><span class="idiff"> </span><span class="m" style="color: #099;"><span class="idiff">4</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">GB</span></span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC416" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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463
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<pre style="margin: 0;"> <span id="LC417" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">bigtiff</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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464
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<pre style="margin: 0;"> <span id="LC418" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span></span>
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<pre style="margin: 0;"> <span id="LC419" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">],</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC420" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC421" class="line" lang="mosel"> <span class="n" style="color: #333;">Append</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">existing</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC422" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC423" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC424" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">append</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC425" class="line" lang="mosel"> </span>
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467
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<pre style="margin: 0;"> <span id="LC426" class="line" lang="mosel"> <span class="n" style="color: #333;">Iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">successively</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">images</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC427" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC428" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC470" class="line" lang="plaintext"> ... image_stack = tif.asarray()</span>
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<pre style="margin: 0;"> <span id="LC429" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC472" class="line" lang="plaintext"> ... for tag in page.tags<span class="idiff left right">.values()</span>:</span>
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<pre style="margin: 0;">+<span id="LC430" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">tags</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC431" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tag_name</span><span class="p">,</span> <span class="n" style="color: #333;">tag_value</span> <span class="p">=</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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432
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<pre style="margin: 0;"> <span id="LC432" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC433" class="line" lang="mosel"> </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -479,7 +437,7 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC437" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data1</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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480
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438
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<pre style="margin: 0;"> <span id="LC438" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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481
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439
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<pre style="margin: 0;"> <span id="LC439" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data0</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'rgb'</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC482" class="line" lang="plaintext"> ... tif.save(data1, compress=6, photometric='minisblack')</span>
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440
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<pre style="margin: 0;">+<span id="LC440" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data1</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">contiguous</span></span><span class="p"><span class="idiff">=</span></span><span class="nb" style="color: #0086b3;"><span class="idiff right">False</span></span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC441" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC442" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">second</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC443" class="line" lang="mosel"> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="487" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="445" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -487,7 +445,7 @@ Description: Read and write TIFF(r) files</td>
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445
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<pre style="margin: 0;"> <span id="LC445" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series1</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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488
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446
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<pre style="margin: 0;"> <span id="LC446" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">)</span></span>
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489
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447
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<pre style="margin: 0;"> <span id="LC447" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC490" class="line" lang="plaintext"> Read an image stack from a se<span class="idiff left right">quence</span> of TIFF files with a file name pattern:</span>
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448
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<pre style="margin: 0;">+<span id="LC448" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">se<span class="idiff left right">ries</span></span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">name</span> <span class="n" style="color: #333;">pattern</span><span class="p">:</span></span>
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491
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<pre style="margin: 0;"> <span id="LC449" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC450" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T001.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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493
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<pre style="margin: 0;"> <span id="LC451" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T002.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -500,18 +458,22 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC458" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;"> <span id="LC459" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC460" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC461" class="line" lang="mosel"> <span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span><span class="p">:</span></span>
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462
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<pre style="margin: 0;">+<span id="LC462" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC463" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">def</span> <span class="n" style="color: #333;">tiles</span><span class="p">():</span></span>
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<pre style="margin: 0;">+<span id="LC464" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">).</span><span class="n" style="color: #333;">reshape</span><span class="p">((</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC465" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span> <span class="n" style="color: #333;">yield</span> <span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC466" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">tiles</span><span class="p">(),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">48</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">),</span> <span class="n" style="color: #333;">tile</span><span class="p">=(</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC467" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC468" class="line" lang="mosel"><span class="n" style="color: #333;">Platform</span><span class="p">:</span> <span class="n" style="color: #333;">any</span></span>
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<pre style="margin: 0;"> <span id="LC469" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Development</span> <span class="n" style="color: #333;">Status</span> <span class="p">::</span> <span class="m" style="color: #099;">4</span> <span class="p">-</span> <span class="n" style="color: #333;">Beta</span></span>
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<pre style="margin: 0;"> <span id="LC470" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">License</span> <span class="p">::</span> <span class="n" style="color: #333;">OSI</span> <span class="n" style="color: #333;">Approved</span> <span class="p">::</span> <span class="n" style="color: #333;">BSD</span> <span class="n" style="color: #333;">License</span></span>
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<pre style="margin: 0;"> <span id="LC471" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Science</span><span class="p">/</span><span class="n" style="color: #333;">Research</span></span>
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<pre style="margin: 0;"> <span id="LC472" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Developers</span></span>
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<pre style="margin: 0;"> <span id="LC473" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Operating</span> <span class="nf" style="color: #900; font-weight: 600;">System</span> <span class="p">::</span> <span class="n" style="color: #333;">OS</span> <span class="n" style="color: #333;">Independent</span></span>
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<pre style="margin: 0;">-<span id="LC509" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 2</span>
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<pre style="margin: 0;">-<span id="LC510" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 2.7</span>
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<pre style="margin: 0;">-<span id="LC511" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3</span>
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<pre style="margin: 0;">-<span id="LC512" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3.4</span>
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<pre style="margin: 0;">-<span id="LC513" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3.5</span>
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<pre style="margin: 0;">+<span id="LC474" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3</span> <span class="p">::</span> <span class="n" style="color: #333;">Only</span></span>
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514
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<pre style="margin: 0;"> <span id="LC475" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.6</span></span>
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515
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476
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<pre style="margin: 0;"> <span id="LC476" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.7</span></span>
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516
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<pre style="margin: 0;">-<span id="LC516" class="line" lang="plaintext">Requires-Python: >=2.7</span>
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477
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<pre style="margin: 0;">+<span id="LC477" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.8</span></span>
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478
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<pre style="margin: 0;">+<span id="LC478" class="line" lang="mosel"><span class="n" style="color: #333;">Requires</span><span class="p">-</span><span class="n" style="color: #333;">Python</span><span class="p">:</span> <span class="p">>=</span><span class="m" style="color: #099;">3.6</span></span>
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517
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<pre style="margin: 0;"> <span id="LC479" class="line" lang="mosel"><span class="n" style="color: #333;">Provides</span><span class="p">-</span><span class="n" style="color: #333;">Extra</span><span class="p">:</span> <span class="n" style="color: #333;">all</span></span></pre>
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<li id="561b88e19de321ca62c7590bbb350765fb110905">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#561b88e19de321ca62c7590bbb350765fb110905"><strong>README.rst</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,29 +4,29 @@ Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="mosel"><span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">library</span> <span class="k" style="font-weight: 600;">to</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">)</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">(2) read image and metadata from TIFF<span class="idiff left right"> </span>like files used in bioimaging.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">used</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">bioimaging</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, <span class="idiff left right">NIH</span>,</span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"><span class="idiff left right">SGI, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS, ZIF</span>,</span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"><span class="idiff left right">Q</span>PI, and GeoTIFF files.</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="mosel"><span class="n" style="color: #333;">Image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left right">SGI</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">NIHImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ImageJ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroManager</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">FluoView</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ScanImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SEQ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">GEL</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SVS</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SCN</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">SIS</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">ZIF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">ND</span>PI</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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12
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="mosel"></span>
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"><span class="n" style="color: #333;">Numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">written</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstack</span> <span class="n" style="color: #333;">compatible</span></span>
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"><span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mappable</span><span class="p">,</span> <span class="n" style="color: #333;">tiled</span><span class="p">,</span> <span class="n" style="color: #333;">predicted</span><span class="p">,</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">form</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="mosel"></span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"><span class="idiff left right">Only a</span> subset of the TIFF specification is supported, mainly uncompressed and</span>
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17
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<td class="diff-line-num new_line old" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext">losslessly compressed <span class="idiff left right">1, </span>8, 16, 32 and 64-bit integer, 16, 32 and 64-bit float,</span>
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<td class="diff-line-num new_line old" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext">grayscale and <span class="idiff left right">RGB(A)</span> images.</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left right">A</span></span> <span class="n" style="color: #333;">subset</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">specification</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">supported</span><span class="p">,</span> <span class="n" style="color: #333;">mainly</span> <span class="n" style="color: #333;">uncompressed</span> <span class="k" style="font-weight: 600;">and</span></span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="mosel"><span class="n" style="color: #333;">losslessly</span> <span class="n" style="color: #333;">compressed</span> <span class="m" style="color: #099;">8</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="k" style="font-weight: 600;">integer</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">float</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="mosel"><span class="n" style="color: #333;">grayscale</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;"><span class="idiff left">multi</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff right">sample</span></span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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19
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="mosel"><span class="n" style="color: #333;">Specifically</span><span class="p">,</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">CCITT</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">OJPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext">chroma subsampling without JPEG compression, <span class="idiff left right">or IPTC and XMP metadata are not</span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">implemented.</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="mosel"><span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">color</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">space</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">transformations</span></span><span class="p"><span class="idiff right">,</span></span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">samples</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">with</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">differing</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">types</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">or</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">IPTC</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">XMP</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">metadata</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">not</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">implemented</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="mosel"><span class="n" style="color: #333;">TIFF</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">),</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">,</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">trademark</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">control</span> <span class="k" style="font-weight: 600;">of</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext">Adobe Systems Incorporated. BigTIFF allows for files <span class="idiff left right">great</span>er than 4 GB.</span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext">STK, LSM, FluoView, SGI, SEQ, GEL, <span class="idiff left right">and OME-TIFF, are custom extensions</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"><span class="idiff left right">defined by Molecular Devices (Universal Imaging Corporation), Carl Zeiss</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"><span class="idiff left right">MicroImaging, Olympus, Silicon Graphics International, Media Cybernetics</span>,</span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext">M<span class="idiff left right">olecular Dynamics, and the Open Microscopy Environment consortium</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext">respectively.</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="mosel"><span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;"><span class="idiff left right">larg</span>er</span> <span class="n" style="color: #333;">than</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="mosel"><span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;">FluoView</span><span class="p">,</span> <span class="n" style="color: #333;">SGI</span><span class="p">,</span> <span class="n" style="color: #333;">SEQ</span><span class="p">,</span> <span class="n" style="color: #333;">GEL</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">NDPI</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">OME</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">custom</span></span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">extensions</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">defined</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">by</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Devices</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">Universal</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Imaging</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Corporation</span></span><span class="p"><span class="idiff right">),</span></span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">Carl</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Zeiss</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroImaging</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Olympus</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Silicon</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Graphics</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">International</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="mosel"><span class="n" style="color: #333;">M<span class="idiff left">edia</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Cybernetics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Dynamics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">PerkinElmer</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Hamamatsu</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">the</span></span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="mosel"><span class="n" style="color: #333;"><span class="idiff left">Open</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Microscopy</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Environment</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">consortium</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">respectively</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="mosel"><span class="n" style="color: #333;">For</span> <span class="nf" style="color: #900; font-weight: 600;">command</span> <span class="n" style="color: #333;">line</span> <span class="n" style="color: #333;">usage</span> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">tifffile</span> <span class="p">--</span><span class="n" style="color: #333;">help</span><span class="p">``</span></span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="mosel"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -36,29 +36,148 @@ For command line usage run ``python -m tifffile --help``</td>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="mosel"><span class="p">:</span><span class="n" style="color: #333;">Organization</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="mosel"> <span class="n" style="color: #333;">Laboratory</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Fluorescence</span> <span class="n" style="color: #333;">Dynamics</span><span class="p">,</span> <span class="n" style="color: #333;">University</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">California</span><span class="p">,</span> <span class="n" style="color: #333;">Irvine</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext">:Version: 2018.11.28</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="mosel"><span class="p">:</span><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">BSD</span> <span class="m" style="color: #099;">3</span><span class="p">-</span><span class="n" style="color: #333;">Clause</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="mosel"><span class="p">:</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">2020.5.11</span></span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="mosel"><span class="k" style="font-weight: 600;">Requirements</span></span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="mosel"><span class="p">------------</span></span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext">* `CPython 2.7 or 3.5+ 64-bit <https://www.python.org>`_</span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext">* `Numpy 1.14 <https://www.numpy.org>`_</span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext">* `Imagecodecs 2018.11.8 <https://pypi.org/project/imagecodecs/>`_</span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> (optional; used for decoding LZW, JPEG, etc.)</span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext">* `Matplotlib 2.2 <https://www.matplotlib.org>`_ (optional; used for plotting)</span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext">* Python 2.7 requires 'futures', 'enum34', and 'pathlib'.</span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="mosel"><span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">release</span> <span class="n" style="color: #333;">has</span> <span class="n" style="color: #333;">been</span> <span class="n" style="color: #333;">tested</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">following</span> <span class="k" style="font-weight: 600;">requirements</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dependencies</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="mosel"><span class="p">(</span><span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">work</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CPython</span> <span class="m" style="color: #099;">3.6.8</span><span class="p">,</span> <span class="m" style="color: #099;">3.7.7</span><span class="p">,</span> <span class="m" style="color: #099;">3.8.2</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">python</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Numpy</span> <span class="m" style="color: #099;">1.16.6</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imagecodecs</span> <span class="m" style="color: #099;">2020.2.18</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">etc</span><span class="p">.)</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Matplotlib</span> <span class="m" style="color: #099;">3.1</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">matplotlib</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">plotting</span><span class="p">)</span></span>
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49
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53
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="mosel"></span>
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50
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54
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="mosel"><span class="n" style="color: #333;">Revisions</span></span>
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51
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55
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="mosel"><span class="p">---------</span></span>
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56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="mosel"><span class="m" style="color: #099;">2020.5.11</span></span>
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57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="m" style="color: #099;">2908</span> <span class="n" style="color: #333;">tests</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">mode</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">images</span> <span class="p">(#</span><span class="m" style="color: #099;">6</span><span class="p">).</span></span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span><span class="p">.</span></span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="mosel"><span class="m" style="color: #099;">2020.5.7</span></span>
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<td class="diff-line-num new new_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="62" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">single</span> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">larger</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="p">(#</span><span class="m" style="color: #099;">3</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="mosel"> <span class="n" style="color: #333;">Always</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">ExtraSamples</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tuple</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="mosel"><span class="m" style="color: #099;">2020.5.5</span></span>
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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">decoded</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffPage</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">chunks</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">ThreadPoolExecutor</span><span class="p">.</span><span class="n" style="color: #333;">map</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reduce</span> <span class="n" style="color: #333;">memory</span> <span class="n" style="color: #333;">usage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">too</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">over</span><span class="p">-</span><span class="n" style="color: #333;">aligned</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="mosel"> <span class="n" style="color: #333;">Detect</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">declaration</span> <span class="p">(#</span><span class="m" style="color: #099;">2</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">LERC</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">functions</span><span class="p">.</span></span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">maxsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">asarray</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="mosel"> <span class="n" style="color: #333;">Deprecate</span> <span class="n" style="color: #333;">ijmetadata</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">.</span><span class="n" style="color: #333;">save</span> <span class="p">(</span><span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">metadata</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="mosel"><span class="m" style="color: #099;">2020.2.16</span></span>
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<td class="diff-line-num new new_line" data-linenumber="76" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">individual</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tiles</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">order</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">their</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">threading</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">decompressing</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">tags</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTags</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAGS</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTagRegistry</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAG_NAMES</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="mosel"> <span class="n" style="color: #333;">Match</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">uncommon</span> <span class="n" style="color: #333;">parts</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">paths</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">letters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">indexing</span> <span class="n" style="color: #333;">well</span> <span class="n" style="color: #333;">plate</span> <span class="n" style="color: #333;">rows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reorder</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">plain</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">zero</span> <span class="n" style="color: #333;">size</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">nonconformant</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">xml2dict</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2020.1.31</span><span class="p">.</span></span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">verify</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">asarray</span> <span class="k" style="font-weight: 600;">function</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">deprecated</span> <span class="n" style="color: #333;">lzw_decode</span> <span class="n" style="color: #333;">functions</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">2.7</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">3.5</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="mosel"><span class="m" style="color: #099;">2019.7.26</span></span>
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<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">infinite</span> <span class="n" style="color: #333;">loop</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">two</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">same</span> <span class="n" style="color: #333;">code</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="n" style="color: #333;">import</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">logging</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="mosel"><span class="m" style="color: #099;">2019.7.20</span></span>
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<td class="diff-line-num new new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">detection</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Imaris</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">replace</span> <span class="nb" style="color: #0086b3;">assert</span> <span class="n" style="color: #333;">statements</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="mosel"><span class="m" style="color: #099;">2019.7.2</span></span>
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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">SampleFormat</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">unsigned</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="mosel"> <span class="n" style="color: #333;">Write</span> <span class="n" style="color: #333;">ByteCount</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">SHORT</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">LONG</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">specify</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">via</span> <span class="n" style="color: #333;">group</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">option</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">concurrently</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">threads</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="mosel"> <span class="n" style="color: #333;">Derive</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">str</span><span class="p">(</span><span class="n" style="color: #333;">datetime</span><span class="p">.</span><span class="n" style="color: #333;">timedelta</span><span class="p">)</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">duration</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">perf_counter</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Timer</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="mosel"><span class="m" style="color: #099;">2019.6.18</span></span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Bio</span><span class="p">-</span><span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">single</span><span class="p">-</span><span class="n" style="color: #333;">file</span><span class="p">,</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">UUID</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="mosel"> <span class="n" style="color: #333;">Presume</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">uncompressed</span> <span class="n" style="color: #333;">images</span> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="mosel"> <span class="n" style="color: #333;">Reformat</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">complex</span> <span class="n" style="color: #333;">expressions</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="mosel"><span class="m" style="color: #099;">2019.5.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">frames</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Set</span> <span class="n" style="color: #333;">default</span> <span class="n" style="color: #333;">subsampling</span> <span class="k" style="font-weight: 600;">to</span> <span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">buffered_read</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">FileHandle</span><span class="p">.</span><span class="n" style="color: #333;">read_segments</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Include</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">frame</span> <span class="n" style="color: #333;">numbers</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">exceptions</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">class</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="mosel"><span class="m" style="color: #099;">2019.5.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">optional</span> <span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">PNG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEGXR</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">JPEG2K</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="mosel"><span class="m" style="color: #099;">2019.3.18</span></span>
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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">regression</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">photometrics</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">corrupted</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">unused</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">TiffFrame</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">specifying</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="mosel"> <span class="n" style="color: #333;">Calculate</span> <span class="n" style="color: #333;">virtual</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span><span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">property</span> <span class="n" style="color: #333;">is_chroma_subsampled</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">is_subsampled</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">attributes</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">methods</span> <span class="n" style="color: #333;">private</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="mosel"><span class="m" style="color: #099;">2019.3.8</span></span>
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<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">MemoryError</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">RowsPerStrip</span> <span class="p">></span> <span class="n" style="color: #333;">ImageLength</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">SyntaxWarning</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3.8</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="mosel"> <span class="n" style="color: #333;">Fail</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="mosel"> <span class="n" style="color: #333;">Separate</span> <span class="k" style="font-weight: 600;">public</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">private</span> <span class="n" style="color: #333;">test</span> <span class="n" style="color: #333;">files</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">testing</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="mosel"><span class="m" style="color: #099;">2019.2.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">fallback</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="mosel"> <span class="n" style="color: #333;">Simplify</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">sequences</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">iterators</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TiffPageSeries</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">interface</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="mosel"> <span class="n" style="color: #333;">Auto</span><span class="p">-</span><span class="n" style="color: #333;">detect</span> <span class="n" style="color: #333;">uniform</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">hash</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">determine</span> <span class="n" style="color: #333;">generic</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="mosel"> <span class="n" style="color: #333;">Turn</span> <span class="n" style="color: #333;">off</span> <span class="n" style="color: #333;">TiffPages</span> <span class="n" style="color: #333;">cache</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">through</span> <span class="n" style="color: #333;">more</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">movie</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">TiffFile</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">bigsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imwrite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="mosel"> <span class="n" style="color: #333;">Raise</span> <span class="n" style="color: #333;">TiffFileError</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">case</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">issues</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">structure</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">ome_metadata</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">XML</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">series</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">dimensions</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="mosel"><span class="m" style="color: #099;">2019.2.10</span></span>
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<td class="diff-line-num new new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="mosel"> <span class="n" style="color: #333;">Assemble</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">memory</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">speed</span><span class="p">-</span><span class="n" style="color: #333;">up</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">slow</span> <span class="n" style="color: #333;">media</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="mosel"> <span class="n" style="color: #333;">Handle</span> <span class="n" style="color: #333;">discontinued</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">fastij</span><span class="p">,</span> <span class="n" style="color: #333;">multifile_close</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="mosel"><span class="m" style="color: #099;">2019.1.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">black</span> <span class="n" style="color: #333;">background</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">datetime</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">default</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">SamplesPerPixel</span> <span class="p">></span> <span class="m" style="color: #099;">1.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">NDPI</span> <span class="p">(</span><span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span><span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">still</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">supported</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="mosel"><span class="m" style="color: #099;">2019.1.4</span></span>
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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">deflate</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="mosel"><span class="m" style="color: #099;">2019.1.1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="mosel"> <span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">copyright</span> <span class="n" style="color: #333;">year</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.12.16</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">tables</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">NDPI</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">old</span><span class="p">-</span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">JPEG</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="mosel"> <span class="n" style="color: #333;">Reorder</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">channel</span> <span class="n" style="color: #333;">axis</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">match</span> <span class="n" style="color: #333;">PlanarConfiguration</span> <span class="n" style="color: #333;">storage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">contiguous</span> <span class="n" style="color: #333;">arrays</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">decode_lzw</span> <span class="n" style="color: #333;">proxy</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">compatibility</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">old</span> <span class="n" style="color: #333;">czifile</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">dedicated</span> <span class="n" style="color: #333;">logger</span><span class="p">.</span></span>
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52
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<td class="diff-line-num new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
172
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="mosel"><span class="m" style="color: #099;">2018.11.28</span></span>
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<td class="diff-line-num old old_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
53
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<td class="diff-line-num new_line old" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> Pass 2739 tests.</span>
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54
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<td class="diff-line-num new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">SubIFDs</span> <span class="n" style="color: #333;">accessible</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num old old_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
55
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<td class="diff-line-num new_line old" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext"> Make parsing of TiffSequence axes pattern optional (b<span class="idiff left right">ackward incompatible</span>).</span>
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">optional</span> <span class="p">(</span><span class="n" style="color: #333;">b<span class="idiff left right">reaking</span></span><span class="p">).</span></span>
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56
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<td class="diff-line-num new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
175
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="mosel"> <span class="n" style="color: #333;">Limit</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">names</span><span class="p">,</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">path</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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57
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<td class="diff-line-num new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
176
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">interpolate</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">dimensions</span> <span class="p"><=</span> <span class="m" style="color: #099;">512</span><span class="p">,</span> <span class="k" style="font-weight: 600;">else</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">bilinear</span><span class="p">.</span></span>
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58
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<td class="diff-line-num new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
177
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">logging</span><span class="p">.</span><span class="n" style="color: #333;">warning</span> <span class="n" style="color: #333;">instead</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span><span class="n" style="color: #333;">warn</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">cases</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
59
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<td class="diff-line-num new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
178
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">FutureWarning</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">out</span> <span class="p">==</span> <span class="s1" style="color: #d14;">'memmap'</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
60
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<td class="diff-line-num new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
179
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<pre style="margin: 0;"> <span id="LC179" class="line" lang="mosel"> <span class="n" style="color: #333;">Adjust</span> <span class="n" style="color: #333;">ZSTD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">libtiff</span><span class="p">-</span><span class="m" style="color: #099;">4.0.10</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num old old_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
61
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<td class="diff-line-num new_line old" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> Decode old<span class="idiff left right"> </span>style LZW with imagecodecs >= 2018.11.8.</span>
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<td class="diff-line-num new old_line" data-linenumber="62" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">old</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">LZW</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.11.8</span><span class="p">.</span></span>
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62
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<td class="diff-line-num new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
181
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">qptiff_metadata</span> <span class="p">(</span><span class="n" style="color: #333;">QPI</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">).</span></span>
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<td class="diff-line-num old_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
63
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<td class="diff-line-num new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
182
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">keyword</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">variable</span> <span class="n" style="color: #333;">positional</span> <span class="n" style="color: #333;">arguments</span><span class="p">.</span></span>
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64
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183
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">either</span> <span class="n" style="color: #333;">all</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">none</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">statements</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">expression</span><span class="p">.</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -67,323 +186,117 @@ Revisions</td>
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67
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="mosel"><span class="m" style="color: #099;">2018.11.6</span></span>
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68
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">imsave</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">imwrite</span><span class="p">.</span></span>
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69
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<td class="diff-line-num new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
188
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="mosel"> <span class="n" style="color: #333;">Readd</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">implementations</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">packints</span><span class="p">,</span> <span class="n" style="color: #333;">delta</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">bitorder</span> <span class="n" style="color: #333;">codecs</span><span class="p">.</span></span>
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70
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="plaintext"> Fix TiffFrame.compression AttributeError<span class="idiff left right"> (bug fix)</span>.</span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">TiffFrame</span><span class="p">.</span><span class="n" style="color: #333;">compression</span> <span class="n" style="color: #333;">AttributeError</span><span class="p">.</span></span>
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71
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="mosel"><span class="m" style="color: #099;">2018.10.18</span></span>
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72
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="plaintext"> Rename tiffile package to tifffile.</span>
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73
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="plaintext">2018.10.10</span>
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74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext"> Pass 2710 tests.</span>
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75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="plaintext"> Read ZIF, the Zoomable Image Format (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="76" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
76
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="plaintext"> Decode YCbCr JPEG as RGB (tentative).</span>
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<td class="diff-line-num old old_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
77
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="plaintext"> Improve restoration of incomplete tiles.</span>
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78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> Allow to write grayscale with extrasamples without specifying planarconfig.</span>
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<td class="diff-line-num old old_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
79
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="plaintext"> Enable decoding of PNG and JXR via imagecodecs.</span>
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<td class="diff-line-num old old_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
80
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> Deprecate 32-bit platforms (too many memory errors during tests).</span>
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81
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext">2018.9.27</span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="plaintext"> Read Olympus SIS (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
83
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> Allow to write non-BigTIFF files up to ~4 GB (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
84
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="plaintext"> Fix parsing date and time fields in SEM metadata (bug fix).</span>
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85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="plaintext"> Detect some circular IFD references.</span>
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<td class="diff-line-num old old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
86
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> Enable WebP codecs via imagecodecs.</span>
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87
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext"> Add option to read TiffSequence from ZIP containers.</span>
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<td class="diff-line-num old old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
88
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="plaintext"> Remove TiffFile.isnative.</span>
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<td class="diff-line-num old old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
89
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext"> Move TIFF struct format constants out of TiffFile namespace.</span>
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<td class="diff-line-num old old_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
90
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext">2018.8.31</span>
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<td class="diff-line-num old old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> Pass 2699 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
92
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext"> Fix wrong TiffTag.valueoffset (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
93
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="plaintext"> Towards reading Hamamatsu NDPI (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
94
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> Enable PackBits compression of byte and bool arrays.</span>
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<td class="diff-line-num old old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
95
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext"> Fix parsing NULL terminated CZ_SEM strings.</span>
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<td class="diff-line-num old old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
96
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="plaintext">2018.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
97
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="plaintext"> Move tifffile.py and related modules into tiffile package.</span>
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<td class="diff-line-num old old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
98
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="plaintext"> Move usage examples to module docstring.</span>
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<td class="diff-line-num old old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
99
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="plaintext"> Enable multi-threading for compressed tiles and pages by default.</span>
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<td class="diff-line-num old old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
100
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="plaintext"> Add option to concurrently decode image tiles using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
101
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="plaintext"> Do not skip empty tiles (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
102
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext"> Read JPEG and J2K compressed strips and tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
103
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="plaintext"> Allow floating point predictor on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
104
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> Add option to specify subfiletype on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
105
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext"> Depend on imagecodecs package instead of _tifffile, lzma, etc modules.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
106
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC106" class="line" lang="plaintext"> Remove reverse_bitorder, unpack_ints, and decode functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
107
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext"> Use pytest instead of unittest.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
108
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext">2018.6.20</span>
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<td class="diff-line-num old old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
109
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="plaintext"> Save RGBA with unassociated extrasample by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
110
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="plaintext"> Add option to specify ExtraSamples values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
111
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext">2018.6.17</span>
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<td class="diff-line-num old old_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
112
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="plaintext"> Pass 2680 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
113
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext"> Towards reading JPEG and other compressions via imagecodecs package (WIP).</span>
</pre>
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114
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext"> Read SampleFormat VOID as UINT.</span>
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<td class="diff-line-num old old_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
115
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="plaintext"> Add function to validate TIFF using 'jhove -m TIFF-hul'.</span>
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<td class="diff-line-num old old_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
116
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> Save bool arrays as bilevel TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
117
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext"> Accept pathlib.Path as filenames.</span>
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<td class="diff-line-num old old_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
118
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="plaintext"> Move 'software' argument from TiffWriter __init__ to save.</span>
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<td class="diff-line-num old old_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
119
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="plaintext"> Raise DOS limit to 16 TB.</span>
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<td class="diff-line-num old old_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
120
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="plaintext"> Lazy load lzma and zstd compressors and decompressors.</span>
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<td class="diff-line-num old old_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
121
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="plaintext"> Add option to save IJMetadata tags.</span>
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<td class="diff-line-num old old_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
122
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext"> Return correct number of pages for truncated series (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
123
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext"> Move EXIF tags to TIFF.TAG as per TIFF/EP standard.</span>
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<td class="diff-line-num old old_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
124
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="plaintext">2018.2.18</span>
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<td class="diff-line-num old old_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
125
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext"> Pass 2293 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
126
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> Always save RowsPerStrip and Resolution tags as required by TIFF standard.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
127
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<pre style="margin: 0;">-<span id="LC127" class="line" lang="plaintext"> Do not use badly typed ImageDescription.</span>
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<td class="diff-line-num old old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
128
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="plaintext"> Coherce bad ASCII string tags to bytes.</span>
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<td class="diff-line-num old old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
129
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="plaintext"> Tuning of __str__ functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
130
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<pre style="margin: 0;">-<span id="LC130" class="line" lang="plaintext"> Fix reading 'undefined' tag values (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
131
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="plaintext"> Read and write ZSTD compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
132
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext"> Use hexdump to print byte strings.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
133
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<pre style="margin: 0;">-<span id="LC133" class="line" lang="plaintext"> Determine TIFF byte order from data dtype in imsave.</span>
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<td class="diff-line-num old old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
134
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="plaintext"> Add option to specify RowsPerStrip for compressed strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
135
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<pre style="margin: 0;">-<span id="LC135" class="line" lang="plaintext"> Allow memory-map of arrays with non-native byte order.</span>
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<td class="diff-line-num old old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
136
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext"> Attempt to handle ScanImage <= 5.1 files.</span>
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<td class="diff-line-num old old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
137
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="plaintext"> Restore TiffPageSeries.pages sequence interface.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
138
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="plaintext"> Use numpy.frombuffer instead of fromstring to read from binary data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
139
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="plaintext"> Parse GeoTIFF metadata.</span>
</pre>
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140
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="plaintext"> Add option to apply horizontal differencing before compression.</span>
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<td class="diff-line-num old old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
141
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="plaintext"> Towards reading PerkinElmer QPI (QPTIFF, no test files).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
142
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> Do not index out of bounds data in tifffile.c unpackbits and decodelzw.</span>
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<td class="diff-line-num old old_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
143
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext">2017.9.29 (tentative)</span>
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<td class="diff-line-num old old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
144
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext"> Many backward incompatible changes improving speed and resource usage:</span>
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<td class="diff-line-num old old_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
145
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext"> Pass 2268 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
146
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext"> Add detail argument to __str__ function. Remove info functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
147
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext"> Fix potential issue correcting offsets of large LSM files with positions.</span>
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<td class="diff-line-num old old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
148
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<pre style="margin: 0;">-<span id="LC148" class="line" lang="plaintext"> Remove TiffFile sequence interface; use TiffFile.pages instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
149
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext"> Do not make tag values available as TiffPage attributes.</span>
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<td class="diff-line-num old old_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
150
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="plaintext"> Use str (not bytes) type for tag and metadata strings (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
151
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="plaintext"> Use documented standard tag and value names (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
152
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext"> Use enums for some documented TIFF tag values.</span>
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<td class="diff-line-num old old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
153
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<pre style="margin: 0;">-<span id="LC153" class="line" lang="plaintext"> Remove 'memmap' and 'tmpfile' options; use out='memmap' instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
154
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<pre style="margin: 0;">-<span id="LC154" class="line" lang="plaintext"> Add option to specify output in asarray functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
155
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext"> Add option to concurrently decode pages using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
156
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<pre style="margin: 0;">-<span id="LC156" class="line" lang="plaintext"> Add TiffPage.asrgb function (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
157
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<pre style="margin: 0;">-<span id="LC157" class="line" lang="plaintext"> Do not apply colormap in asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
158
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC158" class="line" lang="plaintext"> Remove 'colormapped', 'rgbonly', and 'scale_mdgel' options from asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
159
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="plaintext"> Consolidate metadata in TiffFile _metadata functions.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
160
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC160" class="line" lang="plaintext"> Remove non-tag metadata properties from TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
161
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> Add function to convert LSM to tiled BIN files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
162
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> Align image data in file.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
163
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext"> Make TiffPage.dtype a numpy.dtype.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
164
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="plaintext"> Add 'ndim' and 'size' properties to TiffPage and TiffPageSeries.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
165
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC165" class="line" lang="plaintext"> Allow imsave to write non-BigTIFF files up to ~4 GB.</span>
</pre>
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166
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="plaintext"> Only read one page for shaped series if possible.</span>
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<td class="diff-line-num old old_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
167
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<pre style="margin: 0;">-<span id="LC167" class="line" lang="plaintext"> Add memmap function to create memory-mapped array stored in TIFF file.</span>
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<td class="diff-line-num old old_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
168
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="plaintext"> Add option to save empty arrays to TIFF files.</span>
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<td class="diff-line-num old old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
169
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="plaintext"> Add option to save truncated TIFF files.</span>
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<td class="diff-line-num old old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
170
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="plaintext"> Allow single tile images to be saved contiguously.</span>
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<td class="diff-line-num old old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
171
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<pre style="margin: 0;">-<span id="LC171" class="line" lang="plaintext"> Add optional movie mode for files with uniform pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
172
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<pre style="margin: 0;">-<span id="LC172" class="line" lang="plaintext"> Lazy load pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
173
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"> Use lightweight TiffFrame for IFDs sharing properties with key TiffPage.</span>
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<td class="diff-line-num old old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
174
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> Move module constants to 'TIFF' namespace (speed up module import).</span>
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<td class="diff-line-num old old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
175
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext"> Remove 'fastij' option from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
176
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<pre style="margin: 0;">-<span id="LC176" class="line" lang="plaintext"> Remove 'pages' parameter from TiffFile.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
177
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<pre style="margin: 0;">-<span id="LC177" class="line" lang="plaintext"> Remove TIFFfile alias.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
178
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<pre style="margin: 0;">-<span id="LC178" class="line" lang="plaintext"> Deprecate Python 2.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
179
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<pre style="margin: 0;">-<span id="LC179" class="line" lang="plaintext"> Require enum34 and futures packages on Python 2.7.</span>
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<td class="diff-line-num old old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
180
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<pre style="margin: 0;">-<span id="LC180" class="line" lang="plaintext"> Remove Record class and return all metadata as dict instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
181
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<pre style="margin: 0;">-<span id="LC181" class="line" lang="plaintext"> Add functions to parse STK, MetaSeries, ScanImage, SVS, Pilatus metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
182
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<pre style="margin: 0;">-<span id="LC182" class="line" lang="plaintext"> Read tags from EXIF and GPS IFDs.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
183
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext"> Use pformat for tag and metadata values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
184
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<pre style="margin: 0;">-<span id="LC184" class="line" lang="plaintext"> Fix reading some UIC tags (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
185
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="plaintext"> Do not modify input array in imshow (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
186
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="plaintext"> Fix Python implementation of unpack_ints.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
187
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="plaintext">2017.5.23</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
188
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext"> Pass 1961 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
189
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext"> Write correct number of SampleFormat values (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
190
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext"> Use Adobe deflate code to write ZIP compressed files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
191
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="plaintext"> Add option to pass tag values as packed binary data for writing.</span>
</pre>
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192
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="plaintext"> Defer tag validation to attribute access.</span>
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<td class="diff-line-num old old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
193
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> Use property instead of lazyattr decorator for simple expressions.</span>
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<td class="diff-line-num old old_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
194
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext">2017.3.17</span>
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<td class="diff-line-num old old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
195
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext"> Write IFDs and tag values on word boundaries.</span>
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<td class="diff-line-num old old_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
196
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="plaintext"> Read ScanImage metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
197
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC197" class="line" lang="plaintext"> Remove is_rgb and is_indexed attributes from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
198
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="plaintext"> Create files used by doctests.</span>
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<td class="diff-line-num old old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
199
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="plaintext">2017.1.12</span>
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<td class="diff-line-num old old_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
200
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> Read Zeiss SEM metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
201
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="plaintext"> Read OME-TIFF with invalid references to external files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
202
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="plaintext"> Rewrite C LZW decoder (5x faster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
203
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="plaintext"> Read corrupted LSM files missing EOI code in LZW stream.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
204
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="plaintext">2017.1.1</span>
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<td class="diff-line-num old old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
205
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC205" class="line" lang="plaintext"> Add option to append images to existing TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
206
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC206" class="line" lang="plaintext"> Read files without pages.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
207
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC207" class="line" lang="plaintext"> Read S-FEG and Helios NanoLab tags created by FEI software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
208
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext"> Allow saving Color Filter Array (CFA) images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
209
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="plaintext"> Add info functions returning more information about TiffFile and TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
210
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="plaintext"> Add option to read specific pages only.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
211
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext"> Remove maxpages argument (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
212
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext"> Remove test_tifffile function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
213
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="plaintext">2016.10.28</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
214
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="plaintext"> Pass 1944 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
215
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="plaintext"> Improve detection of ImageJ hyperstacks.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
216
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> Read TVIPS metadata created by EM-MENU (by Marco Oster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
217
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="plaintext"> Add option to disable using OME-XML metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
218
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> Allow non-integer range attributes in modulo tags (by Stuart Berg).</span>
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219
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="plaintext">2016.6.21</span>
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220
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext"> Do not always memmap contiguous data in page series.</span>
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<td class="diff-line-num old old_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
221
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext">2016.5.13</span>
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<td class="diff-line-num old old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
222
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext"> Add option to specify resolution unit.</span>
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<td class="diff-line-num old old_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
223
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="plaintext"> Write grayscale images with extra samples when planarconfig is specified.</span>
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<td class="diff-line-num old old_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
224
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<pre style="margin: 0;">-<span id="LC224" class="line" lang="plaintext"> Do not write RGB color images with 2 samples.</span>
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<td class="diff-line-num old old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
225
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="plaintext"> Reorder TiffWriter.save keyword arguments (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
226
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<pre style="margin: 0;">-<span id="LC226" class="line" lang="plaintext">2016.4.18</span>
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<td class="diff-line-num old old_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
227
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="plaintext"> Pass 1932 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
228
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext"> TiffWriter, imread, and imsave accept open binary file streams.</span>
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<td class="diff-line-num old old_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
229
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<pre style="margin: 0;">-<span id="LC229" class="line" lang="plaintext">2016.04.13</span>
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<td class="diff-line-num old old_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
230
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="plaintext"> Correctly handle reversed fill order in 2 and 4 bps images (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
231
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="plaintext"> Implement reverse_bitorder in C.</span>
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<td class="diff-line-num old old_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
232
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="plaintext">2016.03.18</span>
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<td class="diff-line-num old old_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
233
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC233" class="line" lang="plaintext"> Fix saving additional ImageJ metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
234
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext">2016.2.22</span>
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<td class="diff-line-num old old_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
235
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="plaintext"> Pass 1920 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
236
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext"> Write 8 bytes double tag values using offset if necessary (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
237
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext"> Add option to disable writing second image description tag.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
238
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<pre style="margin: 0;">-<span id="LC238" class="line" lang="plaintext"> Detect tags with incorrect counts.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
239
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="plaintext"> Disable color mapping for LSM.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
240
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext">2015.11.13</span>
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<td class="diff-line-num old old_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
241
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC241" class="line" lang="plaintext"> Read LSM 6 mosaics.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
242
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="plaintext"> Add option to specify directory of memory-mapped files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
243
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC243" class="line" lang="plaintext"> Add command line options to specify vmin and vmax values for colormapping.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
244
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="plaintext">2015.10.06</span>
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<td class="diff-line-num old old_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
245
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext"> New helper function to apply colormaps.</span>
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<td class="diff-line-num old old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
246
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="plaintext"> Renamed is_palette attributes to is_indexed (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
247
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext"> Color-mapped samples are now contiguous (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
248
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="plaintext"> Do not color-map ImageJ hyperstacks (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
249
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext"> Towards reading Leica SCN.</span>
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<td class="diff-line-num old old_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
250
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext">2015.9.25</span>
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<td class="diff-line-num old old_line" data-linenumber="251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
251
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="plaintext"> Read images with reversed bit order (FillOrder is LSB2MSB).</span>
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<td class="diff-line-num old old_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
252
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="plaintext">2015.9.21</span>
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<td class="diff-line-num old old_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
253
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="plaintext"> Read RGB OME-TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
254
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC254" class="line" lang="plaintext"> Warn about malformed OME-XML.</span>
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<td class="diff-line-num old old_line" data-linenumber="255" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
255
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC255" class="line" lang="plaintext">2015.9.16</span>
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<td class="diff-line-num old old_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
256
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="plaintext"> Detect some corrupted ImageJ metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
257
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext"> Better axes labels for 'shaped' files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
258
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="plaintext"> Do not create TiffTag for default values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
259
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="plaintext"> Chroma subsampling is not supported.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
260
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="plaintext"> Memory-map data in TiffPageSeries if possible (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
261
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="plaintext">2015.8.17</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
262
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="plaintext"> Pass 1906 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
263
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC263" class="line" lang="plaintext"> Write ImageJ hyperstacks (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
264
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="plaintext"> Read and write LZMA compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
265
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext"> Specify datetime when saving (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
266
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="plaintext"> Save tiled and color-mapped images (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
267
</td>
<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="plaintext"> Ignore void bytecounts and offsets if possible.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
268
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="plaintext"> Ignore bogus image_depth tag created by ISS Vista software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
269
</td>
<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="plaintext"> Decode floating point horizontal differencing (not tiled).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
270
</td>
<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="plaintext"> Save image data contiguously if possible.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
271
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC271" class="line" lang="plaintext"> Only read first IFD from ImageJ files if possible.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
272
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC272" class="line" lang="plaintext"> Read ImageJ 'raw' format (files larger than 4 GB).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
273
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext"> TiffPageSeries class for pages with compatible shape and data type.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
274
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC274" class="line" lang="plaintext"> Try to read incomplete tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
275
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="plaintext"> Open file dialog if no filename is passed on command line.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
276
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC276" class="line" lang="plaintext"> Ignore errors when decoding OME-XML.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
277
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC277" class="line" lang="plaintext"> Rename decoder functions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
278
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC278" class="line" lang="plaintext">2014.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
279
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC279" class="line" lang="plaintext"> TiffWriter class for incremental writing images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
280
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC280" class="line" lang="plaintext"> Simplify examples.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
281
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC281" class="line" lang="plaintext">2014.8.19</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
282
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="plaintext"> Add memmap function to FileHandle.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
283
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC283" class="line" lang="plaintext"> Add function to determine if image data in TiffPage is memory-mappable.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
284
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="plaintext"> Do not close files if multifile_close parameter is False.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
285
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC285" class="line" lang="plaintext">2014.8.10</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
286
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC286" class="line" lang="plaintext"> Pass 1730 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
287
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC287" class="line" lang="plaintext"> Return all extrasamples by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
288
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC288" class="line" lang="plaintext"> Read data from series of pages into memory-mapped array (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
289
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="plaintext"> Squeeze OME dimensions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
290
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="plaintext"> Workaround missing EOI code in strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
291
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="plaintext"> Support image and tile depth tags (SGI extension).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
292
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="plaintext"> Better handling of STK/UIC tags (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
293
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC293" class="line" lang="plaintext"> Disable color mapping for STK.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
294
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="plaintext"> Julian to datetime converter.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
295
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="plaintext"> TIFF ASCII type may be NULL separated.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
296
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="plaintext"> Unwrap strip offsets for LSM files greater than 4 GB.</span>
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<td class="diff-line-num old old_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
297
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="plaintext"> Correct strip byte counts in compressed LSM files.</span>
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<td class="diff-line-num old old_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
298
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="plaintext"> Skip missing files in OME series.</span>
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<td class="diff-line-num old old_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
299
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> Read embedded TIFF files.</span>
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<td class="diff-line-num old old_line" data-linenumber="300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
300
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="plaintext">2014.2.05</span>
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<td class="diff-line-num old old_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
301
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<pre style="margin: 0;">-<span id="LC301" class="line" lang="plaintext"> Save rational numbers as type 5 (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
302
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="plaintext">2013.12.20</span>
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<td class="diff-line-num old old_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
303
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<pre style="margin: 0;">-<span id="LC303" class="line" lang="plaintext"> Keep other files in OME multi-file series closed.</span>
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<td class="diff-line-num old old_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
304
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="plaintext"> FileHandle class to abstract binary file handle.</span>
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<td class="diff-line-num old old_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
305
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC305" class="line" lang="plaintext"> Disable color mapping for bad OME-TIFF produced by bio-formats.</span>
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<td class="diff-line-num old old_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
306
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC306" class="line" lang="plaintext"> Read bad OME-XML produced by ImageJ when cropping.</span>
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<td class="diff-line-num old old_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
307
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="plaintext">2013.11.3</span>
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<td class="diff-line-num old old_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
308
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="plaintext"> Allow zlib compress data in imsave function (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
309
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="plaintext"> Memory-map contiguous image data (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
310
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="plaintext">2013.10.28</span>
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<td class="diff-line-num old old_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
311
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC311" class="line" lang="plaintext"> Read MicroManager metadata and little-endian ImageJ tag.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
312
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="plaintext"> Save extra tags in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
313
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext"> Save tags in ascending order by code (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
314
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="plaintext">2012.10.18</span>
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<td class="diff-line-num old old_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
315
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="plaintext"> Accept file like objects (read from OIB files).</span>
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<td class="diff-line-num old old_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
316
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="plaintext">2012.8.21</span>
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<td class="diff-line-num old old_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
317
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="plaintext"> Rename TIFFfile to TiffFile and TIFFpage to TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
318
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="plaintext"> TiffSequence class for reading sequence of TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
319
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext"> Read UltraQuant tags.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
320
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="plaintext"> Allow float numbers as resolution in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
321
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<td class="diff-line-num new_line old" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC321" class="line" lang="plaintext">2012.8.3</span>
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<td class="diff-line-num old old_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
322
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="plaintext"> Read MD GEL tags and NIH Image header.</span>
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323
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<pre style="margin: 0;">-<span id="LC323" class="line" lang="plaintext">2012.7.25</span>
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324
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<pre style="margin: 0;">-<span id="LC324" class="line" lang="plaintext"> Read ImageJ tags.</span>
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325
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="mosel"> <span class="p">...</span></span>
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326
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="mosel"></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="mosel"><span class="n" style="color: #333;">Refer</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">CHANGES</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">older</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="mosel"></span>
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327
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="mosel"><span class="n" style="color: #333;">Notes</span></span>
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328
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="mosel"><span class="p">-----</span></span>
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329
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="mosel"><span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">API</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stable</span> <span class="n" style="color: #333;">yet</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">change</span> <span class="n" style="color: #333;">between</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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330
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198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="mosel"></span>
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331
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<td class="diff-line-num new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="mosel"><span class="n" style="color: #333;">Tested</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">little</span><span class="p">-</span><span class="n" style="color: #333;">endian</span> <span class="n" style="color: #333;">platforms</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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332
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="mosel"></span>
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333
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<pre style="margin: 0;">-<span id="LC333" class="line" lang="plaintext">Python 2.7, 3.4, and 32-bit versions are deprecated.</span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="mosel"><span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">deprecated</span><span class="p">.</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="mosel"></span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="mosel"><span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">pip</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">setuptools</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">latest</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">installing</span> <span class="n" style="color: #333;">tifffile</span><span class="p">:</span></span>
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="mosel"></span>
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205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="mosel"> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">install</span> <span class="p">--</span><span class="n" style="color: #333;">upgrade</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">setuptools</span><span class="p">``</span></span>
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<td class="diff-line-num new new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="mosel"><span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">relies</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">the</span> <span class="p">`</span><span class="n" style="color: #333;">imagecodecs</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="mosel"><span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="mosel"><span class="n" style="color: #333;">Several</span> <span class="n" style="color: #333;">TIFF</span><span class="p">-</span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">formats</span> <span class="k" style="font-weight: 600;">do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">strictly</span> <span class="n" style="color: #333;">adhere</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF6</span> <span class="n" style="color: #333;">specification</span><span class="p">,</span></span>
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<td class="diff-line-num new new_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="mosel"><span class="n" style="color: #333;">some</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">sizes</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">exceed</span> <span class="n" style="color: #333;">the</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">limit</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">BigTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">identified</span> <span class="n" style="color: #333;">by</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">number</span> <span class="m" style="color: #099;">43</span> <span class="k" style="font-weight: 600;">and</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">different</span> <span class="n" style="color: #333;">file</span></span>
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<td class="diff-line-num new new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="mosel"> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span> <span class="k" style="font-weight: 600;">with</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span> <span class="n" style="color: #333;">It</span> <span class="n" style="color: #333;">adds</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ImageJ</span><span class="p">*</span> <span class="n" style="color: #333;">hyperstacks</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">exceed</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">,</span></span>
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<td class="diff-line-num new new_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span> <span class="n" style="color: #333;">Files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">contain</span> <span class="n" style="color: #333;">one</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">size</span> <span class="p">(</span><span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">6</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span></span>
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<td class="diff-line-num new new_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="mosel"> <span class="n" style="color: #333;">determined</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">Latin</span><span class="p">-</span><span class="m" style="color: #099;">1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="mosel"> <span class="n" style="color: #333;">encoded</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstacks</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">one</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">BigTIFF</span></span>
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<td class="diff-line-num new new_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="mosel"> <span class="n" style="color: #333;">files</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">UTF</span><span class="p">-</span><span class="m" style="color: #099;">8</span> <span class="n" style="color: #333;">encoded</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">found</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span></span>
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<td class="diff-line-num new new_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="mosel"> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">defines</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">position</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">high</span></span>
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<td class="diff-line-num new new_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="mosel"> <span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="n" style="color: #333;">except</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span></span>
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225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="mosel"> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">LSM</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">IFDs</span> <span class="n" style="color: #333;">below</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">wraps</span> <span class="n" style="color: #333;">around</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">StripOffsets</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">position</span> <span class="n" style="color: #333;">require</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">unwrapping</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">contains</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">bytes</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">uncompressed</span></span>
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<td class="diff-line-num new new_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
229
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="mosel"> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">NDPI</span><span class="p">*</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">some</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="mosel"> <span class="n" style="color: #333;">Tag</span> <span class="n" style="color: #333;">values</span><span class="p">/</span><span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">corrected</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">high</span> <span class="n" style="color: #333;">bits</span> <span class="n" style="color: #333;">stored</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">IFD</span></span>
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<td class="diff-line-num new new_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="mosel"> <span class="n" style="color: #333;">structures</span><span class="p">.</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">dimensions</span> <span class="p">></span> <span class="m" style="color: #099;">65536</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">readable</span></span>
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<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
233
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">libjpeg</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">NDPI</span> <span class="n" style="color: #333;">files</span> <span class="p"><</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decompress</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span></span>
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<td class="diff-line-num new new_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="mosel"> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">library</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Windows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
235
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ScanImage</span><span class="p">*</span> <span class="n" style="color: #333;">optionally</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">corrupt</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">values</span></span>
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<td class="diff-line-num new new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
236
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">recovered</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">constant</span></span>
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<td class="diff-line-num new new_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
237
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="mosel"> <span class="n" style="color: #333;">differences</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">IFD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="n" style="color: #333;">throughout</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">such</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span></span>
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<td class="diff-line-num new new_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="mosel"><span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">GeoTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">strip</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tile</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">byte</span> <span class="n" style="color: #333;">counts</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="m" style="color: #099;">0.</span></span>
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241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="mosel"> <span class="n" style="color: #333;">Such</span> <span class="n" style="color: #333;">segments</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">implicitly</span> <span class="k" style="font-weight: 600;">set</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">0</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">NODATA</span> <span class="n" style="color: #333;">value</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">reading</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="mosel"><span class="n" style="color: #333;">Other</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">scientific</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Python</span><span class="p">:</span></span>
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336
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC337" class="line" lang="plaintext">* `Python-bioformats <https://github.com/CellProfiler/python-bioformats>`_</span>
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338
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<pre style="margin: 0;">-<span id="LC338" class="line" lang="plaintext">* `Imread <https://github.com/luispedro/imread>`_</span>
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339
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<pre style="margin: 0;">-<span id="LC339" class="line" lang="plaintext">* `GDAL <https://github.com/OSGeo/gdal/tree/master/gdal/swig/python>`_</span>
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340
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<pre style="margin: 0;">-<span id="LC340" class="line" lang="plaintext">* `OpenSlide-python <https://github.com/openslide/openslide-python>`_</span>
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341
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<pre style="margin: 0;">-<span id="LC341" class="line" lang="plaintext">* `PyLibTiff <https://github.com/pearu/pylibtiff>`_</span>
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342
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<pre style="margin: 0;">-<span id="LC342" class="line" lang="plaintext">* `SimpleITK <http://www.simpleitk.org>`_</span>
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343
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<pre style="margin: 0;">-<span id="LC343" class="line" lang="plaintext">* `PyLSM <https://launchpad.net/pylsm>`_</span>
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<pre style="margin: 0;">-<span id="LC344" class="line" lang="plaintext">* `PyMca.TiffIO.py <https://github.com/vasole/pymca>`_ (same as fabio.TiffIO)</span>
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345
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<pre style="margin: 0;">-<span id="LC345" class="line" lang="plaintext">* `BioImageXD.Readers <http://www.bioimagexd.net/>`_</span>
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346
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<pre style="margin: 0;">-<span id="LC346" class="line" lang="plaintext">* `Cellcognition.io <http://cellcognition.org/>`_</span>
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<pre style="margin: 0;">-<span id="LC347" class="line" lang="plaintext">* `pymimage <https://github.com/ardoi/pymimage>`_</span>
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<pre style="margin: 0;">-<span id="LC348" class="line" lang="plaintext">* `pytiff <https://github.com/FZJ-INM1-BDA/pytiff>`_</span>
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<pre style="margin: 0;">-<span id="LC349" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC350" class="line" lang="plaintext">Acknowledgements</span>
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<pre style="margin: 0;">-<span id="LC351" class="line" lang="plaintext">----------------</span>
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352
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<pre style="margin: 0;">-<span id="LC352" class="line" lang="plaintext">* Egor Zindy, University of Manchester, for lsm_scan_info specifics.</span>
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353
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<pre style="margin: 0;">-<span id="LC353" class="line" lang="plaintext">* Wim Lewis for a bug fix and some LSM functions.</span>
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354
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<pre style="margin: 0;">-<span id="LC354" class="line" lang="plaintext">* Hadrien Mary for help on reading MicroManager files.</span>
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355
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<pre style="margin: 0;">-<span id="LC355" class="line" lang="plaintext">* Christian Kliche for help writing tiled and color-mapped files.</span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">CellProfiler</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imread</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">luispedro</span><span class="p">/</span><span class="n" style="color: #333;">imread</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">GDAL</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">OSGeo</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">tree</span><span class="p">/</span><span class="n" style="color: #333;">master</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">swig</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">OpenSlide</span><span class="p">-</span><span class="n" style="color: #333;">python</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLibTiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">pearu</span><span class="p">/</span><span class="n" style="color: #333;">pylibtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">SimpleITK</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLSM</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">launchpad</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">pylsm</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyMca</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">.</span><span class="n" style="color: #333;">py</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vasole</span><span class="p">/</span><span class="n" style="color: #333;">pymca</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">same</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fabio</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">)</span></span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">BioImageXD</span><span class="p">.</span><span class="n" style="color: #333;">Readers</span> <span class="p"><</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">bioimagexd</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CellCognition</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">cellcognition</span><span class="p">-</span><span class="n" style="color: #333;">project</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pymimage</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">ardoi</span><span class="p">/</span><span class="n" style="color: #333;">pymimage</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pytiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">FZJ</span><span class="p">-</span><span class="n" style="color: #333;">INM1</span><span class="p">-</span><span class="n" style="color: #333;">BDA</span><span class="p">/</span><span class="n" style="color: #333;">pytiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">ScanImageTiffReaderPython</span></span>
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<td class="diff-line-num new new_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gitlab</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vidriotech</span><span class="p">/</span><span class="n" style="color: #333;">scanimagetiffreader</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">bigtiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">bigtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="mosel"><span class="n" style="color: #333;">Some</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">tifffile</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">Apeer</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">library</span></span>
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">micro</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">ometiff</span><span class="p">-</span><span class="n" style="color: #333;">library</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="mosel"><span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Allen</span> <span class="n" style="color: #333;">Institute</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Cell</span> <span class="n" style="color: #333;">Science</span> <span class="n" style="color: #333;">imageio</span></span>
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">aicsimageio</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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268
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC269" class="line" lang="mosel"><span class="n" style="color: #333;">References</span></span>
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358
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270
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="mosel"><span class="p">----------</span></span>
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<pre style="margin: 0;">-<span id="LC359" class="line" lang="plaintext">1<span class="idiff left right">)</span> TIFF 6.0 Specification and Supplements. Adobe Systems Incorporated.</span>
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271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="mosel"><span class="m" style="color: #099;">1<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">Specification</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Supplements</span><span class="p">.</span> <span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC272" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">adobe</span><span class="p">.</span><span class="n" style="color: #333;">io</span><span class="p">/</span><span class="n" style="color: #333;">open</span><span class="p">/</span><span class="n" style="color: #333;">standards</span><span class="p">/</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;">-<span id="LC361" class="line" lang="plaintext">2<span class="idiff left right">)</span> TIFF File Format FAQ. https://www.awaresystems.be/imaging/tiff/faq.html</span>
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362
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<pre style="margin: 0;">-<span id="LC362" class="line" lang="plaintext">3<span class="idiff left right">)</span> MetaMorph Stack (STK) Image File Format.</span>
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273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="mosel"><span class="m" style="color: #099;">2<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">FAQ</span><span class="p">.</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">awaresystems</span><span class="p">.</span><span class="n" style="color: #333;">be</span><span class="p">/</span><span class="n" style="color: #333;">imaging</span><span class="p">/</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span><span class="n" style="color: #333;">faq</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="mosel"><span class="m" style="color: #099;">3<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">MetaMorph</span> <span class="n" style="color: #333;">Stack</span> <span class="p">(</span><span class="n" style="color: #333;">STK</span><span class="p">)</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">.</span></span>
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363
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275
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<pre style="margin: 0;"> <span id="LC275" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">mdc</span><span class="p">.</span><span class="n" style="color: #333;">custhelp</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">app</span><span class="p">/</span><span class="n" style="color: #333;">answers</span><span class="p">/</span><span class="n" style="color: #333;">detail</span><span class="p">/</span><span class="n" style="color: #333;">a_id</span><span class="p">/</span><span class="m" style="color: #099;">18862</span></span>
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364
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<pre style="margin: 0;">-<span id="LC364" class="line" lang="plaintext">4<span class="idiff left right">)</span> Image File Format Description LSM 5/7 Release 6.0 (ZEN 2010).</span>
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276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="mosel"><span class="m" style="color: #099;">4<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">Description</span> <span class="n" style="color: #333;">LSM</span> <span class="m" style="color: #099;">5</span><span class="p">/</span><span class="m" style="color: #099;">7</span> <span class="n" style="color: #333;">Release</span> <span class="m" style="color: #099;">6.0</span> <span class="p">(</span><span class="n" style="color: #333;">ZEN</span> <span class="m" style="color: #099;">2010</span><span class="p">).</span></span>
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365
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277
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="mosel"> <span class="n" style="color: #333;">Carl</span> <span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">MicroImaging</span> <span class="n" style="color: #333;">GmbH</span><span class="p">.</span> <span class="n" style="color: #333;">BioSciences</span><span class="p">.</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">10</span><span class="p">,</span> <span class="m" style="color: #099;">2011</span></span>
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<pre style="margin: 0;">-<span id="LC366" class="line" lang="plaintext">5<span class="idiff left right">)</span> The OME-TIFF format.</span>
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="mosel"><span class="m" style="color: #099;">5<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">format</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC279" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">docs</span><span class="p">.</span><span class="n" style="color: #333;">openmicroscopy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="k" style="font-weight: 600;">model</span><span class="p">/</span><span class="m" style="color: #099;">5.6.4</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span></span>
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<pre style="margin: 0;">-<span id="LC368" class="line" lang="plaintext">6<span class="idiff left right">)</span> UltraQuant(r) Version 6.0 for Windows Start-Up Guide.</span>
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<pre style="margin: 0;">+<span id="LC280" class="line" lang="mosel"><span class="m" style="color: #099;">6<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">UltraQuant</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">)</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Windows</span> <span class="n" style="color: #333;">Start</span><span class="p">-</span><span class="n" style="color: #333;">Up</span> <span class="n" style="color: #333;">Guide</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC281" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">ultralum</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">images</span><span class="p">%</span><span class="m" style="color: #099;">20ul</span><span class="n" style="color: #333;">tralum</span><span class="p">/</span><span class="n" style="color: #333;">pdf</span><span class="p">/</span><span class="n" style="color: #333;">UQStart</span><span class="p">%</span><span class="m" style="color: #099;">20U</span><span class="n" style="color: #333;">p</span><span class="p">%</span><span class="m" style="color: #099;">20</span><span class="n" style="color: #333;">Guide</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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<pre style="margin: 0;">-<span id="LC370" class="line" lang="plaintext">7<span class="idiff left right">)</span> Micro-Manager File Formats.</span>
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="mosel"><span class="m" style="color: #099;">7<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC283" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">micro</span><span class="p">-</span><span class="n" style="color: #333;">manager</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager_File_Formats</span></span>
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<pre style="margin: 0;">-<span id="LC372" class="line" lang="plaintext">8<span class="idiff left right">)</span> Tags for TIFF and Related Specifications. Digital Preservation.</span>
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="mosel"><span class="m" style="color: #099;">8<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Tags</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Related</span> <span class="n" style="color: #333;">Specifications</span><span class="p">.</span> <span class="n" style="color: #333;">Digital</span> <span class="n" style="color: #333;">Preservation</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC285" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">.</span><span class="n" style="color: #333;">gov</span><span class="p">/</span><span class="n" style="color: #333;">preservation</span><span class="p">/</span><span class="n" style="color: #333;">digital</span><span class="p">/</span><span class="n" style="color: #333;">formats</span><span class="p">/</span><span class="n" style="color: #333;">content</span><span class="p">/</span><span class="n" style="color: #333;">tiff_tags</span><span class="p">.</span><span class="n" style="color: #333;">shtml</span></span>
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<pre style="margin: 0;">-<span id="LC374" class="line" lang="plaintext">9<span class="idiff left right">)</span> ScanImage BigTiff Specification - ScanImage 2016.</span>
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="mosel"><span class="m" style="color: #099;">9<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">BigTiff</span> <span class="n" style="color: #333;">Specification</span> <span class="p">-</span> <span class="n" style="color: #333;">ScanImage</span> <span class="m" style="color: #099;">2016.</span></span>
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287
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<pre style="margin: 0;"> <span id="LC287" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">scanimage</span><span class="p">.</span><span class="n" style="color: #333;">vidriotechnologies</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">display</span><span class="p">/</span><span class="n" style="color: #333;">SI2016</span><span class="p">/</span></span>
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376
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288
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<pre style="margin: 0;"> <span id="LC288" class="line" lang="mosel"> <span class="n" style="color: #333;">ScanImage</span><span class="p">+</span><span class="n" style="color: #333;">BigTiff</span><span class="p">+</span><span class="n" style="color: #333;">Specification</span></span>
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377
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<pre style="margin: 0;">-<span id="LC377" class="line" lang="plaintext">10<span class="idiff left right">)</span> CIPA DC-008-2016: Exchangeable image file format for digital still cameras:</span>
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<td class="diff-line-num new new_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="mosel"><span class="m" style="color: #099;">10<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">CIPA</span> <span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">:</span> <span class="n" style="color: #333;">Exchangeable</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">digital</span> <span class="n" style="color: #333;">still</span> <span class="n" style="color: #333;">cameras</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC290" class="line" lang="mosel"> <span class="n" style="color: #333;">Exif</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">2.31</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cipa</span><span class="p">.</span><span class="n" style="color: #333;">jp</span><span class="p">/</span><span class="n" style="color: #333;">std</span><span class="p">/</span><span class="n" style="color: #333;">documents</span><span class="p">/</span><span class="n" style="color: #333;">e</span><span class="p">/</span><span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="n" style="color: #333;">Translation</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">-</span><span class="n" style="color: #333;">E</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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<pre style="margin: 0;">-<span id="LC380" class="line" lang="plaintext">11) ZIF, the Zoomable Image File format. http://zif.photo/</span>
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="mosel"><span class="m" style="color: #099;">11.</span> <span class="n" style="color: #333;">ZIF</span><span class="p">,</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Zoomable</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">format</span><span class="p">.</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">zif</span><span class="p">.</span><span class="n" style="color: #333;">photo</span><span class="p">/</span></span>
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="mosel"><span class="m" style="color: #099;">12.</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gdal</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">drivers</span><span class="p">/</span><span class="n" style="color: #333;">raster</span><span class="p">/</span><span class="n" style="color: #333;">gtiff</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="mosel"><span class="n" style="color: #333;">Examples</span></span>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="mosel"><span class="p">--------</span></span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="mosel"><span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="m" style="color: #099;">3</span><span class="n" style="color: #333;">D</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC386" class="line" lang="plaintext">>>> data = numpy.random.randint(0, 2**1<span class="idiff left right">6</span>, (4, 301, 219), 'uint16')</span>
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">**</span><span class="m" style="color: #099;">1<span class="idiff left right">2</span></span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">whole</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -394,7 +307,7 @@ Read the whole image stack from the TIFF file as numpy array:</td>
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">image_stack</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="mosel"><span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC397" class="line" lang="plaintext">Read the image from <span class="idiff left right">first page (IFD) in the TIFF file</span>:</span>
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;"><span class="idiff left">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">in</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">file</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">as</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">numpy</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff right">array</span></span><span class="p">:</span></span>
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398
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311
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="mosel"></span>
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399
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312
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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400
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313
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<pre style="margin: 0;"> <span id="LC313" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="416" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -416,14 +329,36 @@ Save a floating-point array and metadata, using zlib compression:</td>
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416
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329
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<pre style="margin: 0;"> <span id="LC329" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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417
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<td class="diff-line-num new_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
330
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<pre style="margin: 0;"> <span id="LC330" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'axes'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'TZCYX'</span><span class="p">})</span></span>
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418
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331
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<pre style="margin: 0;"> <span id="LC331" class="line" lang="mosel"></span>
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419
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<pre style="margin: 0;">-<span id="LC419" class="line" lang="plaintext">Save a volume with xyz voxel size 2.6755x2.6755x3.9474 µm^3 to ImageJ file:</span>
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<td class="diff-line-num new new_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
332
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<pre style="margin: 0;">+<span id="LC332" class="line" lang="mosel"><span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">volume</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">xyz</span> <span class="n" style="color: #333;">voxel</span> <span class="n" style="color: #333;">size</span> <span class="m" style="color: #099;">2.6755</span><span class="n" style="color: #333;">x2</span><span class="m" style="color: #099;">.6755</span><span class="n" style="color: #333;">x3</span><span class="m" style="color: #099;">.9474</span> <span class="n" style="color: #333;">micron</span><span class="p">^</span><span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">ImageJ</span></span>
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333
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<pre style="margin: 0;">+<span id="LC333" class="line" lang="mosel"><span class="n" style="color: #333;">formatted</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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420
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334
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<pre style="margin: 0;"> <span id="LC334" class="line" lang="mosel"></span>
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421
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335
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<pre style="margin: 0;"> <span id="LC335" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">volume</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randn</span><span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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<td class="diff-line-num old_line" data-linenumber="422" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
422
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<td class="diff-line-num new_line" data-linenumber="336" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
336
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<pre style="margin: 0;"> <span id="LC336" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">volume</span><span class="p">.</span><span class="n" style="color: #333;">shape</span> <span class="p">=</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">1</span> <span class="p">#</span> <span class="n" style="color: #333;">dimensions</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TZCYXS</span> <span class="n" style="color: #333;">order</span></span>
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423
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337
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<pre style="margin: 0;"> <span id="LC337" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">volume</span><span class="p">,</span> <span class="n" style="color: #333;">imagej</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">,</span> <span class="n" style="color: #333;">resolution</span><span class="p">=(</span><span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">,</span> <span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">),</span></span>
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424
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<td class="diff-line-num new_line" data-linenumber="338" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
338
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<pre style="margin: 0;"> <span id="LC338" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'spacing'</span><span class="p">:</span> <span class="m" style="color: #099;">3.947368</span><span class="p">,</span> <span class="s1" style="color: #d14;">'unit'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'um'</span><span class="p">})</span></span>
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425
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339
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<pre style="margin: 0;"> <span id="LC339" class="line" lang="mosel"></span>
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426
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<pre style="margin: 0;">-<span id="LC426" class="line" lang="plaintext">Read hyperstack and metadata from ImageJ file:</span>
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<td class="diff-line-num new new_line" data-linenumber="340" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
340
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="mosel"><span class="n" style="color: #333;">Get</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">volume</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tif</span> <span class="p">=</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span></span>
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343
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">len</span><span class="p">(</span><span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">)</span> <span class="p">#</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span></span>
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344
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<pre style="margin: 0;">+<span id="LC344" class="line" lang="mosel"><span class="m" style="color: #099;">57</span></span>
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345
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<pre style="margin: 0;">+<span id="LC345" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">page</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span></span>
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346
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<pre style="margin: 0;">+<span id="LC346" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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347
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<pre style="margin: 0;">+<span id="LC347" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<td class="diff-line-num new new_line" data-linenumber="349" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
349
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="mosel"><span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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350
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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<td class="diff-line-num new new_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="mosel"><span class="s1" style="color: #d14;">'YX'</span></span>
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352
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">series</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">series</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span></span>
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353
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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354
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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355
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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356
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="mosel"><span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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357
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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358
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="mosel"><span class="s1" style="color: #d14;">'ZYX'</span></span>
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359
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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360
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="mosel"></span>
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361
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">hyperstack</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC362" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC363" class="line" lang="mosel"><span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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429
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<pre style="margin: 0;"> <span id="LC364" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">imagej_hyperstack</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -433,35 +368,58 @@ Read hyperstack and metadata from ImageJ file:</td>
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433
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368
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<pre style="margin: 0;"> <span id="LC368" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imagej_metadata</span><span class="p">[</span><span class="s1" style="color: #d14;">'slices'</span><span class="p">]</span></span>
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434
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369
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<pre style="margin: 0;"> <span id="LC369" class="line" lang="mosel"><span class="m" style="color: #099;">57</span></span>
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435
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370
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<pre style="margin: 0;"> <span id="LC370" class="line" lang="mosel"></span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="s2" style="color: #d14;">"XResolution"</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="mosel"></span>
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<td class="diff-line-num new new_line" data-linenumber="373" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="mosel"><span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">tag</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">].</span><span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s1" style="color: #d14;">'XResolution'</span><span class="p">]</span></span>
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375
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<pre style="margin: 0;">+<span id="LC375" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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376
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<pre style="margin: 0;">+<span id="LC376" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">2000</span><span class="p">,</span> <span class="m" style="color: #099;">5351</span><span class="p">)</span></span>
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377
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<pre style="margin: 0;">+<span id="LC377" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span></span>
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378
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<pre style="margin: 0;">+<span id="LC378" class="line" lang="mosel"><span class="s1" style="color: #d14;">'XResolution'</span></span>
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379
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">code</span></span>
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380
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="mosel"><span class="m" style="color: #099;">282</span></span>
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381
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<pre style="margin: 0;">+<span id="LC381" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="k" style="font-weight: 600;">count</span></span>
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382
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<pre style="margin: 0;">+<span id="LC382" class="line" lang="mosel"><span class="m" style="color: #099;">1</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="mosel"><span class="s1" style="color: #d14;">'2I'</span></span>
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385
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<pre style="margin: 0;">+<span id="LC385" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">selected</span> <span class="k" style="font-weight: 600;">range</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="mosel"></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">40</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">))</span></span>
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389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">18</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="mosel"></span>
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436
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<td class="diff-line-num new_line" data-linenumber="392" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
392
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<pre style="margin: 0;"> <span id="LC392" class="line" lang="mosel"><span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">empty</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mapped</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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437
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393
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<pre style="margin: 0;"> <span id="LC393" class="line" lang="mosel"></span>
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438
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<td class="diff-line-num new_line" data-linenumber="394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
394
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<pre style="margin: 0;"> <span id="LC394" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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439
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<td class="diff-line-num new_line" data-linenumber="395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
395
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<pre style="margin: 0;"> <span id="LC395" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span> <span class="p">=</span> <span class="m" style="color: #099;">1.0</span></span>
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440
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396
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<pre style="margin: 0;"> <span id="LC396" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">.</span><span class="n" style="color: #333;">flush</span><span class="p">()</span></span>
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441
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<pre style="margin: 0;">-<span id="LC441" class="line" lang="plaintext">>>> memmap_image.shape, memmap_image.dtype</span>
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442
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<pre style="margin: 0;">-<span id="LC442" class="line" lang="plaintext">((256, 256), dtype('float32'))</span>
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443
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397
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<pre style="margin: 0;"> <span id="LC397" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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444
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398
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<pre style="margin: 0;"> <span id="LC398" class="line" lang="mosel"></span>
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445
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<pre style="margin: 0;">-<span id="LC445" class="line" lang="plaintext">Memory-map image data in the TIFF file:</span>
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<td class="diff-line-num new new_line" data-linenumber="399" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
399
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<pre style="margin: 0;">+<span id="LC399" class="line" lang="mosel"><span class="n" style="color: #333;">Memory</span><span class="p">-</span><span class="n" style="color: #333;">map</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;"><span class="idiff left">of</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff right"> </span><span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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446
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400
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<pre style="margin: 0;"> <span id="LC400" class="line" lang="mosel"></span>
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447
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<td class="diff-line-num new_line" data-linenumber="401" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
401
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<pre style="margin: 0;"> <span id="LC401" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">page</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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448
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402
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<pre style="margin: 0;"> <span id="LC402" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span></span>
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449
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403
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<pre style="margin: 0;"> <span id="LC403" class="line" lang="mosel"><span class="m" style="color: #099;">1.0</span></span>
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450
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404
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<pre style="margin: 0;"> <span id="LC404" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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<pre style="margin: 0;"> <span id="LC405" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC452" class="line" lang="plaintext">Successively append images to a BigTIFF file:</span>
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<td class="diff-line-num new new_line" data-linenumber="406" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC406" class="line" lang="mosel"><span class="n" style="color: #333;">Successively</span> <span class="n" style="color: #333;">append</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">file</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">which</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">can</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">exceed</span></span><span class="idiff"> </span><span class="m" style="color: #099;"><span class="idiff">4</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">GB</span></span><span class="p">:</span></span>
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453
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407
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<pre style="margin: 0;"> <span id="LC407" class="line" lang="mosel"></span>
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408
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<pre style="margin: 0;"> <span id="LC408" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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455
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<td class="diff-line-num new_line" data-linenumber="409" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
409
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<pre style="margin: 0;"> <span id="LC409" class="line" lang="mosel"><span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">bigtiff</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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456
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410
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span></span>
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457
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411
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<pre style="margin: 0;"> <span id="LC411" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">],</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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458
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412
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<pre style="margin: 0;"> <span id="LC412" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC413" class="line" lang="mosel"><span class="n" style="color: #333;">Append</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">existing</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC414" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC415" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="416" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC416" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">append</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span></span>
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417
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<pre style="margin: 0;">+<span id="LC417" class="line" lang="mosel"></span>
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459
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<td class="diff-line-num new_line" data-linenumber="418" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC418" class="line" lang="mosel"><span class="n" style="color: #333;">Iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">successively</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">images</span><span class="p">:</span></span>
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460
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419
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<pre style="margin: 0;"> <span id="LC419" class="line" lang="mosel"></span>
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461
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<pre style="margin: 0;"> <span id="LC420" class="line" lang="mosel"><span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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462
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<pre style="margin: 0;">-<span id="LC462" class="line" lang="plaintext">... image_stack = tif.asarray()</span>
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463
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<pre style="margin: 0;"> <span id="LC421" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC464" class="line" lang="plaintext">... for tag in page.tags<span class="idiff left right">.values()</span>:</span>
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<pre style="margin: 0;">+<span id="LC422" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">tags</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC423" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">tag_name</span><span class="p">,</span> <span class="n" style="color: #333;">tag_value</span> <span class="p">=</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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<pre style="margin: 0;"> <span id="LC424" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC425" class="line" lang="mosel"></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="429" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -471,7 +429,7 @@ Save two image series to a TIFF file:</td>
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<pre style="margin: 0;"> <span id="LC429" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data1</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC430" class="line" lang="mosel"><span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC431" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data0</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'rgb'</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC474" class="line" lang="plaintext">... tif.save(data1, compress=6, photometric='minisblack')</span>
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<pre style="margin: 0;">+<span id="LC432" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data1</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">contiguous</span></span><span class="p"><span class="idiff">=</span></span><span class="nb" style="color: #0086b3;"><span class="idiff right">False</span></span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC433" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC434" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">second</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC435" class="line" lang="mosel"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="479" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -479,7 +437,7 @@ Read the second image series from the TIFF file:</td>
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<pre style="margin: 0;"> <span id="LC437" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">series1</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;"> <span id="LC438" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC439" class="line" lang="mosel"></span>
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<pre style="margin: 0;">-<span id="LC482" class="line" lang="plaintext">Read an image stack from a se<span class="idiff left right">quence</span> of TIFF files with a file name pattern:</span>
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<pre style="margin: 0;">+<span id="LC440" class="line" lang="mosel"><span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">se<span class="idiff left right">ries</span></span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">name</span> <span class="n" style="color: #333;">pattern</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC441" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC442" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T001.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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<pre style="margin: 0;"> <span id="LC443" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T002.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -491,3 +449,10 @@ Read an image stack from a sequence of TIFF files with a file name pattern:</td>
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<pre style="margin: 0;"> <span id="LC449" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">image_sequence</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC450" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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451
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<pre style="margin: 0;"> <span id="LC451" class="line" lang="mosel"><span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC452" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC453" class="line" lang="mosel"><span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC454" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC455" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">def</span> <span class="n" style="color: #333;">tiles</span><span class="p">():</span></span>
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<pre style="margin: 0;">+<span id="LC456" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">).</span><span class="n" style="color: #333;">reshape</span><span class="p">((</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC457" class="line" lang="mosel"><span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span> <span class="n" style="color: #333;">yield</span> <span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC458" class="line" lang="mosel"><span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">tiles</span><span class="p">(),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">48</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">),</span> <span class="n" style="color: #333;">tile</span><span class="p">=(</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span></pre>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#8e2edce0d507e1297474f25c00cae94258db38d8"><strong>setup.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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2
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tifffile/setup.py</span></span>
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3
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="s" style="color: #d14;">"""Tifffile package setuptools script."""</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,29 +9,47 @@ from setuptools import setup</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="n" style="color: #333;">buildnumber</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">''</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python"><span class="n" style="color: #333;">imagecodecs</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'imagecodecs>=2018.11.8'</span></span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="python"></span>
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15
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'tifffile/tifffile.py'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fh</span><span class="p">:</span></span>
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16
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"> <span class="n" style="color: #333;">code</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fh</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"><span class="n" style="color: #333;">version</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r"__version__ = '(.*?)'"</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="n" style="color: #333;">version</span> <span class="o" style="font-weight: 600;">+=</span> <span class="p">(</span><span class="s" style="color: #d14;">'.'</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">buildnumber</span><span class="p">)</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">buildnumber</span> <span class="k" style="font-weight: 600;">else</span> <span class="s" style="color: #d14;">''</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="python"><span class="n" style="color: #333;">description</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'"""(.*)\</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">.[</span><span class="s" style="color: #d14;">\r\n?|\n]'</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="python"><span class="n" style="color: #333;">readme</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'[\r\n?|\n]{2}"""(.*)"""[\r\n?|\n]{2}from'</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="python"> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">MULTILINE</span> <span class="o" style="font-weight: 600;">|</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">DOTALL</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="python"><span class="n" style="color: #333;">license</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'(# Copyright.*?[\r\n?|\n])[\r\n?|\n]+""'</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="python"> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">MULTILINE</span> <span class="o" style="font-weight: 600;">|</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">DOTALL</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"><span class="n" style="color: #333;">readme</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">'</span><span class="p">.</span><span class="n" style="color: #333;">join</span><span class="p">([</span><span class="n" style="color: #333;">description</span><span class="p">,</span> <span class="s" style="color: #d14;">'='</span> <span class="o" style="font-weight: 600;">*</span> <span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">description</span><span class="p">)]</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="python"> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">readme</span><span class="p">.</span><span class="n" style="color: #333;">splitlines</span><span class="p">()[</span><span class="mi" style="color: #099;">1</span><span class="p">:])</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python"><span class="n" style="color: #333;">license</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">license</span><span class="p">.</span><span class="n" style="color: #333;">replace</span><span class="p">(</span><span class="s" style="color: #d14;">'# '</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">).</span><span class="n" style="color: #333;">replace</span><span class="p">(</span><span class="s" style="color: #d14;">'#'</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"><span class="n" style="color: #333;">description</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'"""(.*)\</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">.(?:</span><span class="s" style="color: #d14;">\r\n|\r|\n)'</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="python"><span class="n" style="color: #333;">readme</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'(?:\r\n|\r|\n){2}"""(.*)"""(?:\r\n|\r|\n){2}__version__'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="python"> <span class="n" style="color: #333;">code</span><span class="p">,</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">MULTILINE</span> <span class="o" style="font-weight: 600;">|</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">DOTALL</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"><span class="n" style="color: #333;">readme</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">'</span><span class="p">.</span><span class="n" style="color: #333;">join</span><span class="p">([</span><span class="n" style="color: #333;">description</span><span class="p">,</span> <span class="s" style="color: #d14;">'='</span> <span class="o" style="font-weight: 600;">*</span> <span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">description</span><span class="p">)]</span> <span class="o" style="font-weight: 600;">+</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"> <span class="n" style="color: #333;">readme</span><span class="p">.</span><span class="n" style="color: #333;">splitlines</span><span class="p">()[</span><span class="mi" style="color: #099;">1</span><span class="p">:])</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"><span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'sdist'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">sys</span><span class="p">.</span><span class="n" style="color: #333;">argv</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="python"> <span class="k" style="font-weight: 600;"><span class="idiff left">with</span></span><span class="idiff"> </span><span class="nb" style="color: #0086b3;"><span class="idiff">open</span></span><span class="p"><span class="idiff">(</span></span><span class="s" style="color: #d14;"><span class="idiff">'LICENSE'</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="s" style="color: #d14;"><span class="idiff">'w'</span></span><span class="p"><span class="idiff">)</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">as</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">fh</span></span><span class="p"><span class="idiff right">:</span></span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="python"><span class="idiff left"> </span><span class="n" style="color: #333;"><span class="idiff">fh</span></span><span class="p"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">write</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">license</span></span><span class="p"><span class="idiff right">)</span></span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"><span class="idiff left right"># update README, LICENSE, and CHANGES files</span></span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'README.rst'</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fh</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python"> <span class="n" style="color: #333;">fh</span><span class="p">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">readme</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="python"> <span class="n" style="color: #333;">license</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'(# Copyright.*?(?:\r\n|\r|\n))(?:\r\n|\r|\n)+""'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="python"> <span class="n" style="color: #333;">code</span><span class="p">,</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">MULTILINE</span> <span class="o" style="font-weight: 600;">|</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">DOTALL</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="python"> <span class="n" style="color: #333;">license</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">license</span><span class="p">.</span><span class="n" style="color: #333;">replace</span><span class="p">(</span><span class="s" style="color: #d14;">'# '</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">).</span><span class="n" style="color: #333;">replace</span><span class="p">(</span><span class="s" style="color: #d14;">'#'</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="python"></span>
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<td class="diff-line-num new new_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'LICENSE'</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fh</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="python"> <span class="n" style="color: #333;">fh</span><span class="p">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="s" style="color: #d14;">'BSD 3-Clause License</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="python"> <span class="n" style="color: #333;">fh</span><span class="p">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">license</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python"> <span class="n" style="color: #333;">revisions</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r'(?:\r\n|\r|\n){2}(Revisions.*) \</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">.</span><span class="s" style="color: #d14;">\.\</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">.</span><span class="s" style="color: #d14;">', readme,</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="python"><span class="s" style="color: #d14;"> re.MULTILINE | re.DOTALL).groups()[0].strip()</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python"><span class="s" style="color: #d14;"> with open('</span><span class="n" style="color: #333;">CHANGES</span><span class="p">.</span><span class="n" style="color: #333;">rst</span><span class="s" style="color: #d14;">', 'r') as fh:</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="python"><span class="s" style="color: #d14;"> old = fh.read()</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="python"><span class="s" style="color: #d14;"> d = revisions.splitlines()[-1]</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="python"><span class="s" style="color: #d14;"> old = old.split(d)[-1]</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="python"><span class="s" style="color: #d14;"> with open('</span><span class="n" style="color: #333;">CHANGES</span><span class="p">.</span><span class="n" style="color: #333;">rst</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">w</span><span class="s" style="color: #d14;">') as fh:</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="python"><span class="s" style="color: #d14;"> fh.write(revisions.strip())</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="python"><span class="s" style="color: #d14;"> fh.write(old)</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="python"><span class="s" style="color: #d14;">setup(</span></span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="python"><span class="s" style="color: #d14;"> name='</span><span class="n" style="color: #333;">tifffile</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="python"><span class="s" style="color: #d14;"> version=version,</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -43,24 +60,24 @@ setup(</td>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="python"><span class="s" style="color: #d14;"> url='</span><span class="n" style="color: #333;">https</span><span class="p">:</span><span class="o" style="font-weight: 600;">//</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">lfd</span><span class="p">.</span><span class="n" style="color: #333;">uci</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="o" style="font-weight: 600;">/~</span><span class="n" style="color: #333;">gohlke</span><span class="o" style="font-weight: 600;">/</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="python"><span class="s" style="color: #d14;"> license='</span><span class="n" style="color: #333;">BSD</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="python"><span class="s" style="color: #d14;"> packages=['</span><span class="n" style="color: #333;">tifffile</span><span class="s" style="color: #d14;">'],</span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="python"> <span class="n" style="color: #333;">python_requires</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'>=<span class="idiff left right">2.7</span>'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="python"><span class="s" style="color: #d14;"> python_requires='</span><span class="o" style="font-weight: 600;">>=</span><span class="mf" style="color: #099;"><span class="idiff left right">3.6</span></span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="python"><span class="s" style="color: #d14;"> install_requires=[</span></span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="python"> <span class="s" style="color: #d14;">'numpy>=1.11.3'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="python"> <span class="s" style="color: #d14;">'pathlib;python_version=="2.7"'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="python"> <span class="s" style="color: #d14;">'enum34;python_version=="2.7"'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="python"> <span class="s" style="color: #d14;">'futures;python_version=="2.7"'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># require imagecodecs on Windows only</span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="python"> <span class="n" style="color: #333;">imagecodecs</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">';platform_system=="Windows"'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="python"> <span class="p">],</span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">numpy</span><span class="o" style="font-weight: 600;">>=</span><span class="mf" style="color: #099;">1.15</span><span class="p">.</span><span class="mi" style="color: #099;">1</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">imagecodecs</span><span class="o" style="font-weight: 600;">>=</span><span class="mf" style="color: #099;">2020.2</span><span class="p">.</span><span class="mi" style="color: #099;">18</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="python"><span class="s" style="color: #d14;"> ],</span></span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="python"><span class="s" style="color: #d14;"> extras_require={</span></span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="python"> <span class="s" style="color: #d14;">'all'</span><span class="p">:</span> <span class="p">[</span><span class="s" style="color: #d14;">'matplotlib>=<span class="idiff left">2.2'</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">imagecodecs</span></span><span class="p">],</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="nb" style="color: #0086b3;">all</span><span class="s" style="color: #d14;">': ['</span><span class="n" style="color: #333;">matplotlib</span><span class="o" style="font-weight: 600;">>=</span><span class="mf" style="color: #099;"><span class="idiff left">3.1</span></span><span class="s" style="color: #d14;"><span class="idiff right">'</span>],</span></span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="python"><span class="s" style="color: #d14;"> },</span></span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="python"> <span class="n" style="color: #333;">tests_require</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'pytest'</span><span class="p">,</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">],</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="python"><span class="s" style="color: #d14;"> tests_require=[</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">pytest</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">czifile</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">cmapfile</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">oiffile</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">lfdfiles</span><span class="s" style="color: #d14;">', '</span><span class="n" style="color: #333;">roifile</span><span class="s" style="color: #d14;">'</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="python"><span class="s" style="color: #d14;"> ],</span></span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="python"><span class="s" style="color: #d14;"> entry_points={</span></span>
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75
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">console_scripts</span><span class="s" style="color: #d14;">': [</span></span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">tifffile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">tifffile</span><span class="p">:</span><span class="n" style="color: #333;">main</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="python"> <span class="s" style="color: #d14;">'lsm2bin = tifffile.lsm2bin:main'</span></span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="python"> <span class="p">]},</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">lsm2bin</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">tifffile</span><span class="p">.</span><span class="n" style="color: #333;">lsm2bin</span><span class="p">:</span><span class="n" style="color: #333;">main</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="python"><span class="s" style="color: #d14;"> ],</span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="python"><span class="s" style="color: #d14;"> # '</span><span class="n" style="color: #333;">napari</span><span class="p">.</span><span class="n" style="color: #333;">plugin</span><span class="s" style="color: #d14;">': ['</span><span class="n" style="color: #333;">tifffile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">tifffile</span><span class="p">.</span><span class="n" style="color: #333;">napari_tifffile</span><span class="s" style="color: #d14;">'],</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="python"><span class="s" style="color: #d14;"> },</span></span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="python"><span class="s" style="color: #d14;"> platforms=['</span><span class="nb" style="color: #0086b3;">any</span><span class="s" style="color: #d14;">'],</span></span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="python"><span class="s" style="color: #d14;"> classifiers=[</span></span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Development</span> <span class="n" style="color: #333;">Status</span> <span class="p">::</span> <span class="mi" style="color: #099;">4</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">Beta</span><span class="s" style="color: #d14;">',</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -68,12 +85,9 @@ setup(</td>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Science</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">Research</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Developers</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Operating</span> <span class="n" style="color: #333;">System</span> <span class="p">::</span> <span class="n" style="color: #333;">OS</span> <span class="n" style="color: #333;">Independent</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 2'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 2.7'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.4'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.5'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="mi" style="color: #099;">3</span> <span class="p">::</span> <span class="n" style="color: #333;">Only</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="mf" style="color: #099;">3.6</span><span class="s" style="color: #d14;">',</span></span>
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90
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="mf" style="color: #099;">3.7</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="python"> <span class="p">],</span></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="python"><span class="s" style="color: #d14;"> '</span><span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="mf" style="color: #099;">3.8</span><span class="s" style="color: #d14;">',</span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="python"><span class="s" style="color: #d14;"> ],</span></span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="python"><span class="s" style="color: #d14;">)</span></span></pre>
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<li id="5978e2a758618b83aff2ba9c6eabe1c2db687823">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#5978e2a758618b83aff2ba9c6eabe1c2db687823"><strong>setup_tiffile.py</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># setup_tiffile.py</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;">"""Tiffile module setuptools script."""</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">re</span></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">setuptools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">setup</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="python"><span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'tifffile/tifffile.py'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fh</span><span class="p">:</span></span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"> <span class="n" style="color: #333;">code</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fh</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python"><span class="n" style="color: #333;">version</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">re</span><span class="p">.</span><span class="n" style="color: #333;">search</span><span class="p">(</span><span class="s" style="color: #d14;">r"__version__ = '(.*?)'"</span><span class="p">,</span> <span class="n" style="color: #333;">code</span><span class="p">).</span><span class="n" style="color: #333;">groups</span><span class="p">()[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="python"><span class="n" style="color: #333;">setup</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="python"> <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'tiffile'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="python"> <span class="n" style="color: #333;">version</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">version</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="python"> <span class="n" style="color: #333;">description</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'The tiffile package is deprecated. '</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="python"> <span class="s" style="color: #d14;">'Please use the tifffile package instead.'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="python"> <span class="n" style="color: #333;">author</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Christoph Gohlke'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="python"> <span class="n" style="color: #333;">author_email</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'cgohlke@uci.edu'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="python"> <span class="n" style="color: #333;">url</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'https://www.lfd.uci.edu/~gohlke/'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="python"> <span class="n" style="color: #333;">license</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'BSD'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="python"> <span class="n" style="color: #333;">py_modules</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'tiffile'</span><span class="p">],</span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="python"> <span class="n" style="color: #333;">install_requires</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'tifffile'</span><span class="p">],</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">platforms</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'any'</span><span class="p">],</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">classifiers</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python"> <span class="s" style="color: #d14;">'Development Status :: 4 - Beta'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="python"> <span class="s" style="color: #d14;">'License :: OSI Approved :: BSD License'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="python"> <span class="s" style="color: #d14;">'Intended Audience :: Science/Research'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="python"> <span class="s" style="color: #d14;">'Intended Audience :: Developers'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="python"> <span class="s" style="color: #d14;">'Operating System :: OS Independent'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 2'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 2.7'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.4'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.5'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.6'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 3.7'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="python"> <span class="p">],</span></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="python"><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#626af34e8204774ea46e20955936146dedc828eb"><strong>tests/conftest.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tifffile/tests/conftest.py</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="n" style="color: #333;">collect_ignore</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="s" style="color: #d14;">'_tmp'</span><span class="p">,</span> <span class="s" style="color: #d14;">'data'</span><span class="p">]</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,10 +5,14 @@ collect_ignore = ['_tmp', 'data']</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">pytest_report_header</span><span class="p">(</span><span class="n" style="color: #333;">config</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">tifffile</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">imagecodecs</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="s" style="color: #d14;">'versions: tifffile-%s, imagecodecs-%s, numpy-%s'</span> <span class="o" style="font-weight: 600;">%</span> <span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python"> <span class="n" style="color: #333;">tifffile</span><span class="p">.</span><span class="n" style="color: #333;">__version__</span><span class="p">,</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span><span class="n" style="color: #333;">__version__</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">__version__</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">__version__</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">numpy</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">__version__</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tifffile</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">test_tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">config</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">imagecodecs</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">__version__</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">imagecodecs</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"> <span class="n" style="color: #333;">imagecodecs</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'N/A'</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="p">(</span><span class="s" style="color: #d14;">'versions: tifffile-%s, imagecodecs-%s, numpy-%s</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">'</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"> <span class="s" style="color: #d14;">'test config: %s'</span> <span class="o" style="font-weight: 600;">%</span> <span class="p">(</span><span class="n" style="color: #333;">tifffile</span><span class="p">,</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">,</span> <span class="n" style="color: #333;">config</span><span class="p">()))</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">Exception</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"> <span class="k" style="font-weight: 600;">pass</span></span></pre>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#0e68eb77c1fac130dbc2b1470ebea5146df3de0b"><strong>tests/test_tifffile.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">Metadata</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">2.1</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="mosel"><span class="n" style="color: #333;">Name</span><span class="p">:</span> <span class="n" style="color: #333;">tifffile</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">Version: 20<span class="idiff left right">18.11.28</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">20<span class="idiff left right">20.5.11</span></span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="mosel"><span class="n" style="color: #333;">Summary</span><span class="p">:</span> <span class="n" style="color: #333;">Read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">TIFF</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">)</span> <span class="n" style="color: #333;">files</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="mosel"><span class="n" style="color: #333;">Home</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">lfd</span><span class="p">.</span><span class="n" style="color: #333;">uci</span><span class="p">.</span><span class="n" style="color: #333;">edu</span><span class="p">/~</span><span class="n" style="color: #333;">gohlke</span><span class="p">/</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="mosel"><span class="n" style="color: #333;">Author</span><span class="p">:</span> <span class="n" style="color: #333;">Christoph</span> <span class="n" style="color: #333;">Gohlke</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,29 +12,29 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">library</span> <span class="k" style="font-weight: 600;">to</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">)</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> (2) read image and metadata from TIFF<span class="idiff left right"> </span>like files used in bioimaging.</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">used</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">bioimaging</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> Image and metadata can be read from TIFF, BigTIFF, OME-TIFF, STK, LSM, <span class="idiff left right">NIH</span>,</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right">SGI, ImageJ, MicroManager, FluoView, ScanImage, SEQ, GEL, SVS, SCN, SIS, ZIF</span>,</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> <span class="idiff left right">Q</span>PI, and GeoTIFF files.</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="mosel"> <span class="n" style="color: #333;">Image</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left right">SGI</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">NIHImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ImageJ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroManager</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">FluoView</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">ScanImage</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SEQ</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">GEL</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SVS</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">SCN</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">SIS</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">ZIF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">ND</span>PI</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="mosel"> <span class="n" style="color: #333;">Numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">written</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">TIFF</span><span class="p">,</span> <span class="n" style="color: #333;">BigTIFF</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstack</span> <span class="n" style="color: #333;">compatible</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="mosel"> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mappable</span><span class="p">,</span> <span class="n" style="color: #333;">tiled</span><span class="p">,</span> <span class="n" style="color: #333;">predicted</span><span class="p">,</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">form</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right">Only a</span> subset of the TIFF specification is supported, mainly uncompressed and</span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> losslessly compressed <span class="idiff left right">1, </span>8, 16, 32 and 64-bit integer, 16, 32 and 64-bit float,</span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> grayscale and <span class="idiff left right">RGB(A)</span> images.</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left right">A</span></span> <span class="n" style="color: #333;">subset</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">specification</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">supported</span><span class="p">,</span> <span class="n" style="color: #333;">mainly</span> <span class="n" style="color: #333;">uncompressed</span> <span class="k" style="font-weight: 600;">and</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="mosel"> <span class="n" style="color: #333;">losslessly</span> <span class="n" style="color: #333;">compressed</span> <span class="m" style="color: #099;">8</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="k" style="font-weight: 600;">integer</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">32</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">float</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="mosel"> <span class="n" style="color: #333;">grayscale</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;"><span class="idiff left">multi</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff right">sample</span></span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="mosel"> <span class="n" style="color: #333;">Specifically</span><span class="p">,</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">CCITT</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">OJPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> chroma subsampling without JPEG compression, <span class="idiff left right">or IPTC and XMP metadata are not</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> implemented.</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="mosel"> <span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">color</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">space</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">transformations</span></span><span class="p"><span class="idiff right">,</span></span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">samples</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">with</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">differing</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">types</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">or</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">IPTC</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">XMP</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">metadata</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">not</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">implemented</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="mosel"> <span class="n" style="color: #333;">TIFF</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">),</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Tagged</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">,</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">trademark</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">under</span> <span class="n" style="color: #333;">control</span> <span class="k" style="font-weight: 600;">of</span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> Adobe Systems Incorporated. BigTIFF allows for files <span class="idiff left right">great</span>er than 4 GB.</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> STK, LSM, FluoView, SGI, SEQ, GEL, <span class="idiff left right">and OME-TIFF, are custom extensions</span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> <span class="idiff left right">defined by Molecular Devices (Universal Imaging Corporation), Carl Zeiss</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> <span class="idiff left right">MicroImaging, Olympus, Silicon Graphics International, Media Cybernetics</span>,</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> M<span class="idiff left right">olecular Dynamics, and the Open Microscopy Environment consortium</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> respectively.</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="mosel"> <span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;"><span class="idiff left right">larg</span>er</span> <span class="n" style="color: #333;">than</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="mosel"> <span class="n" style="color: #333;">STK</span><span class="p">,</span> <span class="n" style="color: #333;">LSM</span><span class="p">,</span> <span class="n" style="color: #333;">FluoView</span><span class="p">,</span> <span class="n" style="color: #333;">SGI</span><span class="p">,</span> <span class="n" style="color: #333;">SEQ</span><span class="p">,</span> <span class="n" style="color: #333;">GEL</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left">QPTIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">NDPI</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">OME</span></span><span class="p"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">are</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">custom</span></span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">extensions</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">defined</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">by</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Devices</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">Universal</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Imaging</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Corporation</span></span><span class="p"><span class="idiff right">),</span></span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">Carl</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Zeiss</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">MicroImaging</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Olympus</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Silicon</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Graphics</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">International</span></span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="mosel"> <span class="n" style="color: #333;">M<span class="idiff left">edia</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Cybernetics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Molecular</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Dynamics</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">PerkinElmer</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Hamamatsu</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">and</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">the</span></span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="mosel"> <span class="n" style="color: #333;"><span class="idiff left">Open</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Microscopy</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">Environment</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">consortium</span></span><span class="idiff right"> </span><span class="n" style="color: #333;">respectively</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="mosel"> <span class="n" style="color: #333;">For</span> <span class="nf" style="color: #900; font-weight: 600;">command</span> <span class="n" style="color: #333;">line</span> <span class="n" style="color: #333;">usage</span> <span class="nf" style="color: #900; font-weight: 600;">run</span> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">tifffile</span> <span class="p">--</span><span class="n" style="color: #333;">help</span><span class="p">``</span></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="mosel"> </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,29 +44,148 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="mosel"> <span class="p">:</span><span class="n" style="color: #333;">Organization</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">Laboratory</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Fluorescence</span> <span class="n" style="color: #333;">Dynamics</span><span class="p">,</span> <span class="n" style="color: #333;">University</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">California</span><span class="p">,</span> <span class="n" style="color: #333;">Irvine</span></span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> :Version: 2018.11.28</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="mosel"> <span class="p">:</span><span class="n" style="color: #333;">License</span><span class="p">:</span> <span class="n" style="color: #333;">BSD</span> <span class="m" style="color: #099;">3</span><span class="p">-</span><span class="n" style="color: #333;">Clause</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="mosel"> <span class="p">:</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">2020.5.11</span></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Requirements</span></span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="mosel"> <span class="p">------------</span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> * `CPython 2.7 or 3.5+ 64-bit <https://www.python.org>`_</span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> * `Numpy 1.14 <https://www.numpy.org>`_</span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> * `Imagecodecs 2018.11.8 <https://pypi.org/project/imagecodecs/>`_</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> (optional; used for decoding LZW, JPEG, etc.)</span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext"> * `Matplotlib 2.2 <https://www.matplotlib.org>`_ (optional; used for plotting)</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext"> * Python 2.7 requires 'futures', 'enum34', and 'pathlib'.</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="mosel"> <span class="n" style="color: #333;">This</span> <span class="n" style="color: #333;">release</span> <span class="n" style="color: #333;">has</span> <span class="n" style="color: #333;">been</span> <span class="n" style="color: #333;">tested</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">following</span> <span class="k" style="font-weight: 600;">requirements</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dependencies</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">work</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CPython</span> <span class="m" style="color: #099;">3.6.8</span><span class="p">,</span> <span class="m" style="color: #099;">3.7.7</span><span class="p">,</span> <span class="m" style="color: #099;">3.8.2</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">python</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Numpy</span> <span class="m" style="color: #099;">1.16.6</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imagecodecs</span> <span class="m" style="color: #099;">2020.2.18</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">etc</span><span class="p">.)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Matplotlib</span> <span class="m" style="color: #099;">3.1</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">matplotlib</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">required</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">plotting</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="mosel"> </span>
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62
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="mosel"> <span class="n" style="color: #333;">Revisions</span></span>
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59
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63
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="mosel"> <span class="p">---------</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.11</span></span>
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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="m" style="color: #099;">2908</span> <span class="n" style="color: #333;">tests</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">mode</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">images</span> <span class="p">(#</span><span class="m" style="color: #099;">6</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.7</span></span>
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<td class="diff-line-num new new_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">napari</span> <span class="n" style="color: #333;">reader</span> <span class="n" style="color: #333;">plugin</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">single</span> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">larger</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="p">(#</span><span class="m" style="color: #099;">3</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="mosel"> <span class="n" style="color: #333;">Always</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">ExtraSamples</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tuple</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.5.5</span></span>
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<td class="diff-line-num new new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">decoded</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffPage</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">chunks</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">segments</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">ThreadPoolExecutor</span><span class="p">.</span><span class="n" style="color: #333;">map</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reduce</span> <span class="n" style="color: #333;">memory</span> <span class="n" style="color: #333;">usage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="76" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">too</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="77" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">over</span><span class="p">-</span><span class="n" style="color: #333;">aligned</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="mosel"> <span class="n" style="color: #333;">Detect</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">declaration</span> <span class="p">(#</span><span class="m" style="color: #099;">2</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">LERC</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">functions</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="81" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">maxsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">asarray</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="mosel"> <span class="n" style="color: #333;">Deprecate</span> <span class="n" style="color: #333;">ijmetadata</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">.</span><span class="n" style="color: #333;">save</span> <span class="p">(</span><span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">metadata</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="mosel"> <span class="m" style="color: #099;">2020.2.16</span></span>
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<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">individual</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tiles</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">strips</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">order</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">their</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">threading</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">decompressing</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">strips</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">tags</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTags</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAGS</span> <span class="n" style="color: #333;">dictionary</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffTagRegistry</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">TAG_NAMES</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="mosel"> <span class="n" style="color: #333;">Match</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">uncommon</span> <span class="n" style="color: #333;">parts</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">paths</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">letters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">indexing</span> <span class="n" style="color: #333;">well</span> <span class="n" style="color: #333;">plate</span> <span class="n" style="color: #333;">rows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">reorder</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">plain</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">zero</span> <span class="n" style="color: #333;">size</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">nonconformant</span> <span class="n" style="color: #333;">TIFF</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">xml2dict</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2020.1.31</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">verify</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">asarray</span> <span class="k" style="font-weight: 600;">function</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
</pre>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">deprecated</span> <span class="n" style="color: #333;">lzw_decode</span> <span class="n" style="color: #333;">functions</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">support</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">2.7</span> <span class="k" style="font-weight: 600;">and</span> <span class="m" style="color: #099;">3.5</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.26</span></span>
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<td class="diff-line-num new new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">infinite</span> <span class="n" style="color: #333;">loop</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">than</span> <span class="n" style="color: #333;">two</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">same</span> <span class="n" style="color: #333;">code</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="mosel"> <span class="n" style="color: #333;">Delay</span> <span class="n" style="color: #333;">import</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">logging</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.20</span></span>
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<td class="diff-line-num new new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">detection</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Imaris</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">replace</span> <span class="nb" style="color: #0086b3;">assert</span> <span class="n" style="color: #333;">statements</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.7.2</span></span>
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<td class="diff-line-num new new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">SampleFormat</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">unsigned</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="mosel"> <span class="n" style="color: #333;">Write</span> <span class="n" style="color: #333;">ByteCount</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">SHORT</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">LONG</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">specify</span> <span class="n" style="color: #333;">axes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">via</span> <span class="n" style="color: #333;">group</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">option</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">concurrently</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">FileSequence</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">threads</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="mosel"> <span class="n" style="color: #333;">Derive</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">FileSequence</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">str</span><span class="p">(</span><span class="n" style="color: #333;">datetime</span><span class="p">.</span><span class="n" style="color: #333;">timedelta</span><span class="p">)</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">duration</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">perf_counter</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Timer</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">possible</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.6.18</span></span>
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<td class="diff-line-num new new_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">created</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">Bio</span><span class="p">-</span><span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">single</span><span class="p">-</span><span class="n" style="color: #333;">file</span><span class="p">,</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">UUID</span><span class="p">.</span></span>
</pre>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="mosel"> <span class="n" style="color: #333;">Presume</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">uncompressed</span> <span class="n" style="color: #333;">images</span> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="mosel"> <span class="n" style="color: #333;">Reformat</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">complex</span> <span class="n" style="color: #333;">expressions</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.5.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">invalid</span> <span class="n" style="color: #333;">frames</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Set</span> <span class="n" style="color: #333;">default</span> <span class="n" style="color: #333;">subsampling</span> <span class="k" style="font-weight: 600;">to</span> <span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="mosel"> <span class="n" style="color: #333;">Replace</span> <span class="n" style="color: #333;">buffered_read</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">FileHandle</span><span class="p">.</span><span class="n" style="color: #333;">read_segments</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Include</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">frame</span> <span class="n" style="color: #333;">numbers</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">exceptions</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">Timer</span> <span class="n" style="color: #333;">class</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.5.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">optional</span> <span class="n" style="color: #333;">chroma</span> <span class="n" style="color: #333;">subsampling</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">PNG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="n" style="color: #333;">JPEGXR</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">JPEG2K</span> <span class="n" style="color: #333;">compression</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="mosel"> <span class="n" style="color: #333;">Improve</span> <span class="n" style="color: #333;">handling</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.3.18</span></span>
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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">regression</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">RGB</span> <span class="n" style="color: #333;">photometrics</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">corrupted</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">unused</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="k" style="font-weight: 600;">to</span> <span class="nf" style="color: #900; font-weight: 600;">load</span> <span class="n" style="color: #333;">TiffFrame</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">specifying</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="mosel"> <span class="n" style="color: #333;">Calculate</span> <span class="n" style="color: #333;">virtual</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span><span class="n" style="color: #333;">GB</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">property</span> <span class="n" style="color: #333;">is_chroma_subsampled</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">is_subsampled</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">attributes</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">methods</span> <span class="n" style="color: #333;">private</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.3.8</span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">MemoryError</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">RowsPerStrip</span> <span class="p">></span> <span class="n" style="color: #333;">ImageLength</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">SyntaxWarning</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3.8</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="mosel"> <span class="n" style="color: #333;">Fail</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">decode</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">planar</span> <span class="n" style="color: #333;">RGB</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="mosel"> <span class="n" style="color: #333;">Separate</span> <span class="k" style="font-weight: 600;">public</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">private</span> <span class="n" style="color: #333;">test</span> <span class="n" style="color: #333;">files</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="n" style="color: #333;">testing</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.2.22</span></span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">-</span><span class="n" style="color: #333;">lite</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">fallback</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="mosel"> <span class="n" style="color: #333;">Simplify</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">TiffFrames</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">arrays</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">sequences</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="mosel"> <span class="n" style="color: #333;">Support</span> <span class="n" style="color: #333;">slices</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">iterators</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TiffPageSeries</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">interface</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="mosel"> <span class="n" style="color: #333;">Auto</span><span class="p">-</span><span class="n" style="color: #333;">detect</span> <span class="n" style="color: #333;">uniform</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">page</span> <span class="n" style="color: #333;">hash</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">determine</span> <span class="n" style="color: #333;">generic</span> <span class="n" style="color: #333;">series</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="mosel"> <span class="n" style="color: #333;">Turn</span> <span class="n" style="color: #333;">off</span> <span class="n" style="color: #333;">TiffPages</span> <span class="n" style="color: #333;">cache</span> <span class="p">(</span><span class="n" style="color: #333;">tentative</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="mosel"> <span class="n" style="color: #333;">Pass</span> <span class="n" style="color: #333;">through</span> <span class="n" style="color: #333;">more</span> <span class="k" style="font-weight: 600;">parameters</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">movie</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imread</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">TiffFile</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="mosel"> <span class="n" style="color: #333;">Discontinue</span> <span class="n" style="color: #333;">bigsize</span> <span class="n" style="color: #333;">parameter</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imwrite</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="mosel"> <span class="n" style="color: #333;">Raise</span> <span class="n" style="color: #333;">TiffFileError</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">case</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">issues</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">structure</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">ome_metadata</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">XML</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="mosel"> <span class="n" style="color: #333;">Ignore</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">series</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">last</span> <span class="n" style="color: #333;">dimensions</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.2.10</span></span>
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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="mosel"> <span class="n" style="color: #333;">Assemble</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">memory</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">speed</span><span class="p">-</span><span class="n" style="color: #333;">up</span> <span class="n" style="color: #333;">writing</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">slow</span> <span class="n" style="color: #333;">media</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="mosel"> <span class="n" style="color: #333;">Handle</span> <span class="n" style="color: #333;">discontinued</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">fastij</span><span class="p">,</span> <span class="n" style="color: #333;">multifile_close</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.30</span></span>
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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">black</span> <span class="n" style="color: #333;">background</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">datetime</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">default</span> <span class="p">(</span><span class="n" style="color: #333;">breaking</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">SamplesPerPixel</span> <span class="p">></span> <span class="m" style="color: #099;">1.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="mosel"> <span class="n" style="color: #333;">Allow</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">NDPI</span> <span class="p">(</span><span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span><span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">still</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">supported</span><span class="p">).</span></span>
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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.4</span></span>
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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">deflate</span> <span class="n" style="color: #333;">without</span> <span class="n" style="color: #333;">imagecodecs</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="mosel"> <span class="m" style="color: #099;">2019.1.1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="mosel"> <span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">copyright</span> <span class="n" style="color: #333;">year</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="mosel"> <span class="n" style="color: #333;">Require</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.12.16</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">tables</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">keyframe</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="mosel"> <span class="n" style="color: #333;">Enable</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">NDPI</span><span class="p">.</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">some</span> <span class="n" style="color: #333;">old</span><span class="p">-</span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">JPEG</span><span class="p">.</span></span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="mosel"> <span class="n" style="color: #333;">Reorder</span> <span class="n" style="color: #333;">OME</span> <span class="n" style="color: #333;">channel</span> <span class="n" style="color: #333;">axis</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">match</span> <span class="n" style="color: #333;">PlanarConfiguration</span> <span class="n" style="color: #333;">storage</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="mosel"> <span class="n" style="color: #333;">Return</span> <span class="n" style="color: #333;">tiled</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">contiguous</span> <span class="n" style="color: #333;">arrays</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="mosel"> <span class="n" style="color: #333;">Add</span> <span class="n" style="color: #333;">decode_lzw</span> <span class="n" style="color: #333;">proxy</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">compatibility</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">old</span> <span class="n" style="color: #333;">czifile</span> <span class="n" style="color: #333;">module</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">dedicated</span> <span class="n" style="color: #333;">logger</span><span class="p">.</span></span>
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60
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<td class="diff-line-num new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
180
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.11.28</span></span>
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<td class="diff-line-num old old_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
61
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<td class="diff-line-num new_line old" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> Pass 2739 tests.</span>
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62
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<td class="diff-line-num new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
181
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">SubIFDs</span> <span class="n" style="color: #333;">accessible</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">TiffPage</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">.</span></span>
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<td class="diff-line-num old old_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
63
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<td class="diff-line-num new_line old" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext"> Make parsing of TiffSequence axes pattern optional (b<span class="idiff left right">ackward incompatible</span>).</span>
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<td class="diff-line-num new old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="n" style="color: #333;">optional</span> <span class="p">(</span><span class="n" style="color: #333;">b<span class="idiff left right">reaking</span></span><span class="p">).</span></span>
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<td class="diff-line-num old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
64
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<td class="diff-line-num new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
183
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="mosel"> <span class="n" style="color: #333;">Limit</span> <span class="n" style="color: #333;">parsing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TiffSequence</span> <span class="n" style="color: #333;">axes</span> <span class="n" style="color: #333;">pattern</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">names</span><span class="p">,</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">path</span> <span class="n" style="color: #333;">names</span><span class="p">.</span></span>
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65
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<td class="diff-line-num new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
184
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">interpolate</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">imshow</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">dimensions</span> <span class="p"><=</span> <span class="m" style="color: #099;">512</span><span class="p">,</span> <span class="k" style="font-weight: 600;">else</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">bilinear</span><span class="p">.</span></span>
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66
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<td class="diff-line-num new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
185
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="mosel"> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">logging</span><span class="p">.</span><span class="n" style="color: #333;">warning</span> <span class="n" style="color: #333;">instead</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">warnings</span><span class="p">.</span><span class="n" style="color: #333;">warn</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">many</span> <span class="n" style="color: #333;">cases</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
67
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<td class="diff-line-num new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">numpy</span> <span class="n" style="color: #333;">FutureWarning</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">out</span> <span class="p">==</span> <span class="s1" style="color: #d14;">'memmap'</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
68
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<td class="diff-line-num new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="mosel"> <span class="n" style="color: #333;">Adjust</span> <span class="n" style="color: #333;">ZSTD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">WebP</span> <span class="n" style="color: #333;">compression</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">libtiff</span><span class="p">-</span><span class="m" style="color: #099;">4.0.10</span> <span class="p">(</span><span class="n" style="color: #333;">WIP</span><span class="p">).</span></span>
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<td class="diff-line-num old old_line" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
69
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<td class="diff-line-num new_line old" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> Decode old<span class="idiff left right"> </span>style LZW with imagecodecs >= 2018.11.8.</span>
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<td class="diff-line-num new old_line" data-linenumber="70" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="mosel"> <span class="n" style="color: #333;">Decode</span> <span class="n" style="color: #333;">old</span><span class="p"><span class="idiff left right">-</span></span><span class="n" style="color: #333;">style</span> <span class="n" style="color: #333;">LZW</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="p">>=</span> <span class="m" style="color: #099;">2018.11.8</span><span class="p">.</span></span>
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70
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<td class="diff-line-num new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="mosel"> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">.</span><span class="n" style="color: #333;">qptiff_metadata</span> <span class="p">(</span><span class="n" style="color: #333;">QPI</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">per</span> <span class="n" style="color: #333;">page</span><span class="p">).</span></span>
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<td class="diff-line-num old_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
71
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<td class="diff-line-num new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">Do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">use</span> <span class="n" style="color: #333;">keyword</span> <span class="n" style="color: #333;">arguments</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">variable</span> <span class="n" style="color: #333;">positional</span> <span class="n" style="color: #333;">arguments</span><span class="p">.</span></span>
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<td class="diff-line-num old_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
72
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<td class="diff-line-num new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="mosel"> <span class="n" style="color: #333;">Make</span> <span class="n" style="color: #333;">either</span> <span class="n" style="color: #333;">all</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">none</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">statements</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="k" style="font-weight: 600;">function</span> <span class="n" style="color: #333;">return</span> <span class="n" style="color: #333;">expression</span><span class="p">.</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -75,323 +194,117 @@ Description: Read and write TIFF(r) files</td>
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75
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.11.6</span></span>
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76
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="mosel"> <span class="n" style="color: #333;">Rename</span> <span class="n" style="color: #333;">imsave</span> <span class="k" style="font-weight: 600;">function</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">imwrite</span><span class="p">.</span></span>
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77
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="mosel"> <span class="n" style="color: #333;">Readd</span> <span class="n" style="color: #333;">Python</span> <span class="n" style="color: #333;">implementations</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">packints</span><span class="p">,</span> <span class="n" style="color: #333;">delta</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">bitorder</span> <span class="n" style="color: #333;">codecs</span><span class="p">.</span></span>
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<td class="diff-line-num old old_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> Fix TiffFrame.compression AttributeError<span class="idiff left right"> (bug fix)</span>.</span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="mosel"> <span class="n" style="color: #333;">Fix</span> <span class="n" style="color: #333;">TiffFrame</span><span class="p">.</span><span class="n" style="color: #333;">compression</span> <span class="n" style="color: #333;">AttributeError</span><span class="p">.</span></span>
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79
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<td class="diff-line-num new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="mosel"> <span class="m" style="color: #099;">2018.10.18</span></span>
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80
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> Rename tiffile package to tifffile.</span>
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81
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext"> 2018.10.10</span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="plaintext"> Pass 2710 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="83" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
83
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> Read ZIF, the Zoomable Image Format (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
84
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="plaintext"> Decode YCbCr JPEG as RGB (tentative).</span>
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<td class="diff-line-num old old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="plaintext"> Improve restoration of incomplete tiles.</span>
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<td class="diff-line-num old old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
86
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> Allow to write grayscale with extrasamples without specifying planarconfig.</span>
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<td class="diff-line-num old old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
87
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext"> Enable decoding of PNG and JXR via imagecodecs.</span>
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<td class="diff-line-num old old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
88
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="plaintext"> Deprecate 32-bit platforms (too many memory errors during tests).</span>
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<td class="diff-line-num old old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
89
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext"> 2018.9.27</span>
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90
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext"> Read Olympus SIS (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> Allow to write non-BigTIFF files up to ~4 GB (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
92
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="plaintext"> Fix parsing date and time fields in SEM metadata (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
93
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="plaintext"> Detect some circular IFD references.</span>
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<td class="diff-line-num old old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
94
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> Enable WebP codecs via imagecodecs.</span>
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<td class="diff-line-num old old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
95
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext"> Add option to read TiffSequence from ZIP containers.</span>
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<td class="diff-line-num old old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
96
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="plaintext"> Remove TiffFile.isnative.</span>
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<td class="diff-line-num old old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
97
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="plaintext"> Move TIFF struct format constants out of TiffFile namespace.</span>
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98
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="plaintext"> 2018.8.31</span>
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<td class="diff-line-num old old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
99
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="plaintext"> Pass 2699 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
100
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="plaintext"> Fix wrong TiffTag.valueoffset (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
101
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="plaintext"> Towards reading Hamamatsu NDPI (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
102
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext"> Enable PackBits compression of byte and bool arrays.</span>
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<td class="diff-line-num old old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
103
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="plaintext"> Fix parsing NULL terminated CZ_SEM strings.</span>
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<td class="diff-line-num old old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
104
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> 2018.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
105
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext"> Move tifffile.py and related modules into tiffile package.</span>
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<td class="diff-line-num old old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
106
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC106" class="line" lang="plaintext"> Move usage examples to module docstring.</span>
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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
107
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext"> Enable multi-threading for compressed tiles and pages by default.</span>
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<td class="diff-line-num old old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
108
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext"> Add option to concurrently decode image tiles using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
109
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="plaintext"> Do not skip empty tiles (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
110
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="plaintext"> Read JPEG and J2K compressed strips and tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
111
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext"> Allow floating point predictor on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
112
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="plaintext"> Add option to specify subfiletype on write.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
113
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext"> Depend on imagecodecs package instead of _tifffile, lzma, etc modules.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
114
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext"> Remove reverse_bitorder, unpack_ints, and decode functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
115
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="plaintext"> Use pytest instead of unittest.</span>
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<td class="diff-line-num old old_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
116
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> 2018.6.20</span>
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<td class="diff-line-num old old_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
117
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext"> Save RGBA with unassociated extrasample by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
118
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="plaintext"> Add option to specify ExtraSamples values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
119
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="plaintext"> 2018.6.17</span>
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<td class="diff-line-num old old_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
120
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="plaintext"> Pass 2680 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
121
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="plaintext"> Towards reading JPEG and other compressions via imagecodecs package (WIP).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
122
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext"> Read SampleFormat VOID as UINT.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
123
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext"> Add function to validate TIFF using 'jhove -m TIFF-hul'.</span>
</pre>
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124
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="plaintext"> Save bool arrays as bilevel TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
125
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext"> Accept pathlib.Path as filenames.</span>
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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
126
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> Move 'software' argument from TiffWriter __init__ to save.</span>
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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
127
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<pre style="margin: 0;">-<span id="LC127" class="line" lang="plaintext"> Raise DOS limit to 16 TB.</span>
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<td class="diff-line-num old old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
128
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="plaintext"> Lazy load lzma and zstd compressors and decompressors.</span>
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<td class="diff-line-num old old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
129
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="plaintext"> Add option to save IJMetadata tags.</span>
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<td class="diff-line-num old old_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
130
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<pre style="margin: 0;">-<span id="LC130" class="line" lang="plaintext"> Return correct number of pages for truncated series (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
131
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="plaintext"> Move EXIF tags to TIFF.TAG as per TIFF/EP standard.</span>
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<td class="diff-line-num old old_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
132
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext"> 2018.2.18</span>
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<td class="diff-line-num old old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
133
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<pre style="margin: 0;">-<span id="LC133" class="line" lang="plaintext"> Pass 2293 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
134
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="plaintext"> Always save RowsPerStrip and Resolution tags as required by TIFF standard.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
135
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<pre style="margin: 0;">-<span id="LC135" class="line" lang="plaintext"> Do not use badly typed ImageDescription.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
136
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext"> Coherce bad ASCII string tags to bytes.</span>
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<td class="diff-line-num old old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
137
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="plaintext"> Tuning of __str__ functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
138
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="plaintext"> Fix reading 'undefined' tag values (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
139
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="plaintext"> Read and write ZSTD compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
140
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="plaintext"> Use hexdump to print byte strings.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
141
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="plaintext"> Determine TIFF byte order from data dtype in imsave.</span>
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<td class="diff-line-num old old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
142
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> Add option to specify RowsPerStrip for compressed strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
143
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext"> Allow memory-map of arrays with non-native byte order.</span>
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<td class="diff-line-num old old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
144
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext"> Attempt to handle ScanImage <= 5.1 files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
145
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext"> Restore TiffPageSeries.pages sequence interface.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
146
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext"> Use numpy.frombuffer instead of fromstring to read from binary data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
147
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext"> Parse GeoTIFF metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
148
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<pre style="margin: 0;">-<span id="LC148" class="line" lang="plaintext"> Add option to apply horizontal differencing before compression.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
149
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext"> Towards reading PerkinElmer QPI (QPTIFF, no test files).</span>
</pre>
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150
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="plaintext"> Do not index out of bounds data in tifffile.c unpackbits and decodelzw.</span>
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<td class="diff-line-num old old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
151
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="plaintext"> 2017.9.29 (tentative)</span>
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<td class="diff-line-num old old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
152
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext"> Many backward incompatible changes improving speed and resource usage:</span>
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<td class="diff-line-num old old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
153
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<pre style="margin: 0;">-<span id="LC153" class="line" lang="plaintext"> Pass 2268 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
154
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<pre style="margin: 0;">-<span id="LC154" class="line" lang="plaintext"> Add detail argument to __str__ function. Remove info functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
155
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext"> Fix potential issue correcting offsets of large LSM files with positions.</span>
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<td class="diff-line-num old old_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
156
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<pre style="margin: 0;">-<span id="LC156" class="line" lang="plaintext"> Remove TiffFile sequence interface; use TiffFile.pages instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
157
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC157" class="line" lang="plaintext"> Do not make tag values available as TiffPage attributes.</span>
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<td class="diff-line-num old old_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
158
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<pre style="margin: 0;">-<span id="LC158" class="line" lang="plaintext"> Use str (not bytes) type for tag and metadata strings (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
159
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="plaintext"> Use documented standard tag and value names (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
160
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<pre style="margin: 0;">-<span id="LC160" class="line" lang="plaintext"> Use enums for some documented TIFF tag values.</span>
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<td class="diff-line-num old old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
161
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> Remove 'memmap' and 'tmpfile' options; use out='memmap' instead.</span>
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<td class="diff-line-num old old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
162
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> Add option to specify output in asarray functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
163
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext"> Add option to concurrently decode pages using threads.</span>
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<td class="diff-line-num old old_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
164
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="plaintext"> Add TiffPage.asrgb function (WIP).</span>
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<td class="diff-line-num old old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
165
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<pre style="margin: 0;">-<span id="LC165" class="line" lang="plaintext"> Do not apply colormap in asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
166
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="plaintext"> Remove 'colormapped', 'rgbonly', and 'scale_mdgel' options from asarray.</span>
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<td class="diff-line-num old old_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
167
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<pre style="margin: 0;">-<span id="LC167" class="line" lang="plaintext"> Consolidate metadata in TiffFile _metadata functions.</span>
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<td class="diff-line-num old old_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
168
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="plaintext"> Remove non-tag metadata properties from TiffPage.</span>
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<td class="diff-line-num old old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
169
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="plaintext"> Add function to convert LSM to tiled BIN files.</span>
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<td class="diff-line-num old old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
170
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="plaintext"> Align image data in file.</span>
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<td class="diff-line-num old old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
171
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<pre style="margin: 0;">-<span id="LC171" class="line" lang="plaintext"> Make TiffPage.dtype a numpy.dtype.</span>
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<td class="diff-line-num old old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
172
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC172" class="line" lang="plaintext"> Add 'ndim' and 'size' properties to TiffPage and TiffPageSeries.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
173
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"> Allow imsave to write non-BigTIFF files up to ~4 GB.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
174
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> Only read one page for shaped series if possible.</span>
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<td class="diff-line-num old old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
175
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext"> Add memmap function to create memory-mapped array stored in TIFF file.</span>
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<td class="diff-line-num old old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
176
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<pre style="margin: 0;">-<span id="LC176" class="line" lang="plaintext"> Add option to save empty arrays to TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
177
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<pre style="margin: 0;">-<span id="LC177" class="line" lang="plaintext"> Add option to save truncated TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
178
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<pre style="margin: 0;">-<span id="LC178" class="line" lang="plaintext"> Allow single tile images to be saved contiguously.</span>
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<td class="diff-line-num old old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
179
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<pre style="margin: 0;">-<span id="LC179" class="line" lang="plaintext"> Add optional movie mode for files with uniform pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
180
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC180" class="line" lang="plaintext"> Lazy load pages.</span>
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<td class="diff-line-num old old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
181
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC181" class="line" lang="plaintext"> Use lightweight TiffFrame for IFDs sharing properties with key TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
182
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC182" class="line" lang="plaintext"> Move module constants to 'TIFF' namespace (speed up module import).</span>
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<td class="diff-line-num old old_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
183
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext"> Remove 'fastij' option from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
184
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC184" class="line" lang="plaintext"> Remove 'pages' parameter from TiffFile.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
185
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="plaintext"> Remove TIFFfile alias.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
186
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="plaintext"> Deprecate Python 2.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
187
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="plaintext"> Require enum34 and futures packages on Python 2.7.</span>
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<td class="diff-line-num old old_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
188
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext"> Remove Record class and return all metadata as dict instead.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
189
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext"> Add functions to parse STK, MetaSeries, ScanImage, SVS, Pilatus metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
190
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext"> Read tags from EXIF and GPS IFDs.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
191
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="plaintext"> Use pformat for tag and metadata values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
192
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="plaintext"> Fix reading some UIC tags (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
193
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> Do not modify input array in imshow (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
194
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext"> Fix Python implementation of unpack_ints.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
195
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext"> 2017.5.23</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
196
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="plaintext"> Pass 1961 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
197
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC197" class="line" lang="plaintext"> Write correct number of SampleFormat values (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
198
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="plaintext"> Use Adobe deflate code to write ZIP compressed files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
199
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="plaintext"> Add option to pass tag values as packed binary data for writing.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
200
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> Defer tag validation to attribute access.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
201
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="plaintext"> Use property instead of lazyattr decorator for simple expressions.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
202
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="plaintext"> 2017.3.17</span>
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<td class="diff-line-num old old_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
203
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="plaintext"> Write IFDs and tag values on word boundaries.</span>
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<td class="diff-line-num old old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
204
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="plaintext"> Read ScanImage metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
205
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC205" class="line" lang="plaintext"> Remove is_rgb and is_indexed attributes from TiffFile.</span>
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<td class="diff-line-num old old_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
206
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC206" class="line" lang="plaintext"> Create files used by doctests.</span>
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<td class="diff-line-num old old_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
207
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC207" class="line" lang="plaintext"> 2017.1.12</span>
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<td class="diff-line-num old old_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
208
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext"> Read Zeiss SEM metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
209
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="plaintext"> Read OME-TIFF with invalid references to external files.</span>
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<td class="diff-line-num old old_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
210
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="plaintext"> Rewrite C LZW decoder (5x faster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
211
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext"> Read corrupted LSM files missing EOI code in LZW stream.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
212
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext"> 2017.1.1</span>
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<td class="diff-line-num old old_line" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
213
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="plaintext"> Add option to append images to existing TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
214
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="plaintext"> Read files without pages.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
215
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="plaintext"> Read S-FEG and Helios NanoLab tags created by FEI software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
216
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> Allow saving Color Filter Array (CFA) images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
217
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="plaintext"> Add info functions returning more information about TiffFile and TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
218
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> Add option to read specific pages only.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
219
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="plaintext"> Remove maxpages argument (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
220
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext"> Remove test_tifffile function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
221
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> 2016.10.28</span>
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<td class="diff-line-num old old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
222
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext"> Pass 1944 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
223
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="plaintext"> Improve detection of ImageJ hyperstacks.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
224
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC224" class="line" lang="plaintext"> Read TVIPS metadata created by EM-MENU (by Marco Oster).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
225
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="plaintext"> Add option to disable using OME-XML metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
226
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC226" class="line" lang="plaintext"> Allow non-integer range attributes in modulo tags (by Stuart Berg).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
227
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="plaintext"> 2016.6.21</span>
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<td class="diff-line-num old old_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
228
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext"> Do not always memmap contiguous data in page series.</span>
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<td class="diff-line-num old old_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
229
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<pre style="margin: 0;">-<span id="LC229" class="line" lang="plaintext"> 2016.5.13</span>
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<td class="diff-line-num old old_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
230
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="plaintext"> Add option to specify resolution unit.</span>
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<td class="diff-line-num old old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
231
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="plaintext"> Write grayscale images with extra samples when planarconfig is specified.</span>
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<td class="diff-line-num old old_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
232
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="plaintext"> Do not write RGB color images with 2 samples.</span>
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<td class="diff-line-num old old_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
233
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<pre style="margin: 0;">-<span id="LC233" class="line" lang="plaintext"> Reorder TiffWriter.save keyword arguments (backward incompatible).</span>
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<td class="diff-line-num old old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
234
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext"> 2016.4.18</span>
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<td class="diff-line-num old old_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
235
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="plaintext"> Pass 1932 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
236
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext"> TiffWriter, imread, and imsave accept open binary file streams.</span>
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<td class="diff-line-num old old_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
237
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext"> 2016.04.13</span>
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<td class="diff-line-num old old_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
238
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<pre style="margin: 0;">-<span id="LC238" class="line" lang="plaintext"> Correctly handle reversed fill order in 2 and 4 bps images (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
239
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="plaintext"> Implement reverse_bitorder in C.</span>
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<td class="diff-line-num old old_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
240
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext"> 2016.03.18</span>
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<td class="diff-line-num old old_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
241
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC241" class="line" lang="plaintext"> Fix saving additional ImageJ metadata.</span>
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<td class="diff-line-num old old_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
242
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="plaintext"> 2016.2.22</span>
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<td class="diff-line-num old old_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
243
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<pre style="margin: 0;">-<span id="LC243" class="line" lang="plaintext"> Pass 1920 tests.</span>
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<td class="diff-line-num old old_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
244
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="plaintext"> Write 8 bytes double tag values using offset if necessary (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
245
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext"> Add option to disable writing second image description tag.</span>
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<td class="diff-line-num old old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
246
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="plaintext"> Detect tags with incorrect counts.</span>
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<td class="diff-line-num old old_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
247
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext"> Disable color mapping for LSM.</span>
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<td class="diff-line-num old old_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
248
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="plaintext"> 2015.11.13</span>
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<td class="diff-line-num old old_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
249
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext"> Read LSM 6 mosaics.</span>
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<td class="diff-line-num old old_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
250
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext"> Add option to specify directory of memory-mapped files.</span>
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<td class="diff-line-num old old_line" data-linenumber="251" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
251
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="plaintext"> Add command line options to specify vmin and vmax values for colormapping.</span>
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<td class="diff-line-num old old_line" data-linenumber="252" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
252
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="plaintext"> 2015.10.06</span>
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<td class="diff-line-num old old_line" data-linenumber="253" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
253
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="plaintext"> New helper function to apply colormaps.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
254
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<pre style="margin: 0;">-<span id="LC254" class="line" lang="plaintext"> Renamed is_palette attributes to is_indexed (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="255" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
255
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC255" class="line" lang="plaintext"> Color-mapped samples are now contiguous (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
256
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="plaintext"> Do not color-map ImageJ hyperstacks (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
257
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext"> Towards reading Leica SCN.</span>
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<td class="diff-line-num old old_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
258
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="plaintext"> 2015.9.25</span>
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<td class="diff-line-num old old_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
259
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="plaintext"> Read images with reversed bit order (FillOrder is LSB2MSB).</span>
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<td class="diff-line-num old old_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
260
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="plaintext"> 2015.9.21</span>
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<td class="diff-line-num old old_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
261
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="plaintext"> Read RGB OME-TIFF.</span>
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<td class="diff-line-num old old_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
262
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="plaintext"> Warn about malformed OME-XML.</span>
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<td class="diff-line-num old old_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
263
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC263" class="line" lang="plaintext"> 2015.9.16</span>
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<td class="diff-line-num old old_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
264
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="plaintext"> Detect some corrupted ImageJ metadata.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
265
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext"> Better axes labels for 'shaped' files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
266
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="plaintext"> Do not create TiffTag for default values.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
267
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="plaintext"> Chroma subsampling is not supported.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
268
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="plaintext"> Memory-map data in TiffPageSeries if possible (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
269
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="plaintext"> 2015.8.17</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
270
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="plaintext"> Pass 1906 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
271
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC271" class="line" lang="plaintext"> Write ImageJ hyperstacks (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
272
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC272" class="line" lang="plaintext"> Read and write LZMA compressed data.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
273
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext"> Specify datetime when saving (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
274
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC274" class="line" lang="plaintext"> Save tiled and color-mapped images (optional).</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
275
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC275" class="line" lang="plaintext"> Ignore void bytecounts and offsets if possible.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
276
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC276" class="line" lang="plaintext"> Ignore bogus image_depth tag created by ISS Vista software.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
277
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC277" class="line" lang="plaintext"> Decode floating point horizontal differencing (not tiled).</span>
</pre>
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<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
278
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC278" class="line" lang="plaintext"> Save image data contiguously if possible.</span>
</pre>
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</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
279
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC279" class="line" lang="plaintext"> Only read first IFD from ImageJ files if possible.</span>
</pre>
</td>
</tr>
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
280
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC280" class="line" lang="plaintext"> Read ImageJ 'raw' format (files larger than 4 GB).</span>
</pre>
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</tr>
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<td class="diff-line-num old old_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
281
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC281" class="line" lang="plaintext"> TiffPageSeries class for pages with compatible shape and data type.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
282
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="plaintext"> Try to read incomplete tiles.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
283
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC283" class="line" lang="plaintext"> Open file dialog if no filename is passed on command line.</span>
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<td class="diff-line-num old old_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
284
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="plaintext"> Ignore errors when decoding OME-XML.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
285
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC285" class="line" lang="plaintext"> Rename decoder functions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
286
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC286" class="line" lang="plaintext"> 2014.8.24</span>
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<td class="diff-line-num old old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
287
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC287" class="line" lang="plaintext"> TiffWriter class for incremental writing images.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
288
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC288" class="line" lang="plaintext"> Simplify examples.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
289
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="plaintext"> 2014.8.19</span>
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<td class="diff-line-num old old_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
290
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="plaintext"> Add memmap function to FileHandle.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
291
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="plaintext"> Add function to determine if image data in TiffPage is memory-mappable.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
292
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="plaintext"> Do not close files if multifile_close parameter is False.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
293
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC293" class="line" lang="plaintext"> 2014.8.10</span>
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<td class="diff-line-num old old_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
294
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="plaintext"> Pass 1730 tests.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
295
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="plaintext"> Return all extrasamples by default (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
296
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="plaintext"> Read data from series of pages into memory-mapped array (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
297
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="plaintext"> Squeeze OME dimensions (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
298
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="plaintext"> Workaround missing EOI code in strips.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
299
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> Support image and tile depth tags (SGI extension).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="300" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
300
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="plaintext"> Better handling of STK/UIC tags (backward incompatible).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="301" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
301
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC301" class="line" lang="plaintext"> Disable color mapping for STK.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="302" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
302
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="plaintext"> Julian to datetime converter.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
303
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC303" class="line" lang="plaintext"> TIFF ASCII type may be NULL separated.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
304
</td>
<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="plaintext"> Unwrap strip offsets for LSM files greater than 4 GB.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="305" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
305
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC305" class="line" lang="plaintext"> Correct strip byte counts in compressed LSM files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
306
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC306" class="line" lang="plaintext"> Skip missing files in OME series.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
307
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="plaintext"> Read embedded TIFF files.</span>
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<td class="diff-line-num old old_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
308
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="plaintext"> 2014.2.05</span>
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<td class="diff-line-num old old_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
309
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="plaintext"> Save rational numbers as type 5 (bug fix).</span>
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<td class="diff-line-num old old_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
310
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="plaintext"> 2013.12.20</span>
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<td class="diff-line-num old old_line" data-linenumber="311" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
311
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<pre style="margin: 0;">-<span id="LC311" class="line" lang="plaintext"> Keep other files in OME multi-file series closed.</span>
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<td class="diff-line-num old old_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
312
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="plaintext"> FileHandle class to abstract binary file handle.</span>
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<td class="diff-line-num old old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
313
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext"> Disable color mapping for bad OME-TIFF produced by bio-formats.</span>
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<td class="diff-line-num old old_line" data-linenumber="314" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
314
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="plaintext"> Read bad OME-XML produced by ImageJ when cropping.</span>
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<td class="diff-line-num old old_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
315
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="plaintext"> 2013.11.3</span>
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<td class="diff-line-num old old_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
316
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="plaintext"> Allow zlib compress data in imsave function (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
317
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="plaintext"> Memory-map contiguous image data (optional).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
318
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="plaintext"> 2013.10.28</span>
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<td class="diff-line-num old old_line" data-linenumber="319" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
319
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext"> Read MicroManager metadata and little-endian ImageJ tag.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="320" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
320
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="plaintext"> Save extra tags in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="321" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
321
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<pre style="margin: 0;">-<span id="LC321" class="line" lang="plaintext"> Save tags in ascending order by code (bug fix).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="322" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
322
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="plaintext"> 2012.10.18</span>
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<td class="diff-line-num old old_line" data-linenumber="323" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
323
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<pre style="margin: 0;">-<span id="LC323" class="line" lang="plaintext"> Accept file like objects (read from OIB files).</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="324" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
324
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<pre style="margin: 0;">-<span id="LC324" class="line" lang="plaintext"> 2012.8.21</span>
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<td class="diff-line-num old old_line" data-linenumber="325" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
325
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC325" class="line" lang="plaintext"> Rename TIFFfile to TiffFile and TIFFpage to TiffPage.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="326" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
326
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC326" class="line" lang="plaintext"> TiffSequence class for reading sequence of TIFF files.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="327" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
327
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC327" class="line" lang="plaintext"> Read UltraQuant tags.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
328
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC328" class="line" lang="plaintext"> Allow float numbers as resolution in imsave function.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="329" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
329
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC329" class="line" lang="plaintext"> 2012.8.3</span>
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<td class="diff-line-num old old_line" data-linenumber="330" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
330
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC330" class="line" lang="plaintext"> Read MD GEL tags and NIH Image header.</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="331" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
331
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC331" class="line" lang="plaintext"> 2012.7.25</span>
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<td class="diff-line-num old old_line" data-linenumber="332" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
332
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<td class="diff-line-num new_line old" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
</td>
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<pre style="margin: 0;">-<span id="LC332" class="line" lang="plaintext"> Read ImageJ tags.</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="333" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
333
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<td class="diff-line-num new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="mosel"> <span class="p">...</span></span>
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334
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="mosel"> </span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="mosel"> <span class="n" style="color: #333;">Refer</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">CHANGES</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">older</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="mosel"> </span>
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335
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203
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="mosel"> <span class="n" style="color: #333;">Notes</span></span>
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336
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204
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="mosel"> <span class="p">-----</span></span>
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337
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205
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">API</span> <span class="n" style="color: #333;">is</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">stable</span> <span class="n" style="color: #333;">yet</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">might</span> <span class="n" style="color: #333;">change</span> <span class="n" style="color: #333;">between</span> <span class="n" style="color: #333;">revisions</span><span class="p">.</span></span>
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338
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206
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="mosel"> </span>
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339
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<td class="diff-line-num new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
207
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="mosel"> <span class="n" style="color: #333;">Tested</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">little</span><span class="p">-</span><span class="n" style="color: #333;">endian</span> <span class="n" style="color: #333;">platforms</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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340
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208
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="mosel"> </span>
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341
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<pre style="margin: 0;">-<span id="LC341" class="line" lang="plaintext"> Python 2.7, 3.4, and 32-bit versions are deprecated.</span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="mosel"> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">versions</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">deprecated</span><span class="p">.</span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="mosel"> </span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="mosel"> <span class="n" style="color: #333;">Update</span> <span class="n" style="color: #333;">pip</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">setuptools</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">latest</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">before</span> <span class="n" style="color: #333;">installing</span> <span class="n" style="color: #333;">tifffile</span><span class="p">:</span></span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="mosel"> </span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="mosel"> <span class="p">``</span><span class="n" style="color: #333;">python</span> <span class="p">-</span><span class="n" style="color: #333;">m</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">install</span> <span class="p">--</span><span class="n" style="color: #333;">upgrade</span> <span class="n" style="color: #333;">pip</span> <span class="n" style="color: #333;">setuptools</span><span class="p">``</span></span>
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214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">relies</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">the</span> <span class="p">`</span><span class="n" style="color: #333;">imagecodecs</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">imagecodecs</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">encoding</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decoding</span> <span class="n" style="color: #333;">LZW</span><span class="p">,</span> <span class="n" style="color: #333;">JPEG</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">other</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">images</span><span class="p">.</span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="mosel"> </span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="mosel"> <span class="n" style="color: #333;">Several</span> <span class="n" style="color: #333;">TIFF</span><span class="p">-</span><span class="n" style="color: #333;">like</span> <span class="n" style="color: #333;">formats</span> <span class="k" style="font-weight: 600;">do</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">strictly</span> <span class="n" style="color: #333;">adhere</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF6</span> <span class="n" style="color: #333;">specification</span><span class="p">,</span></span>
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219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="mosel"> <span class="n" style="color: #333;">some</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">sizes</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">exceed</span> <span class="n" style="color: #333;">the</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">limit</span><span class="p">:</span></span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">BigTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">identified</span> <span class="n" style="color: #333;">by</span> <span class="k" style="font-weight: 600;">version</span> <span class="n" style="color: #333;">number</span> <span class="m" style="color: #099;">43</span> <span class="k" style="font-weight: 600;">and</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">different</span> <span class="n" style="color: #333;">file</span></span>
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<td class="diff-line-num new new_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="mosel"> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span> <span class="k" style="font-weight: 600;">with</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span><span class="p">.</span> <span class="n" style="color: #333;">It</span> <span class="n" style="color: #333;">adds</span> <span class="n" style="color: #333;">more</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">types</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="224" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ImageJ</span><span class="p">*</span> <span class="n" style="color: #333;">hyperstacks</span> <span class="n" style="color: #333;">store</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">may</span> <span class="n" style="color: #333;">exceed</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span><span class="p">,</span></span>
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<td class="diff-line-num new new_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">.</span> <span class="n" style="color: #333;">Files</span> <span class="p">></span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">contain</span> <span class="n" style="color: #333;">one</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">only</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="226" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">size</span> <span class="p">(</span><span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span><span class="p">)</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">6</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span></span>
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<td class="diff-line-num new new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="mosel"> <span class="n" style="color: #333;">determined</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="n" style="color: #333;">which</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">Latin</span><span class="p">-</span><span class="m" style="color: #099;">1</span></span>
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<td class="diff-line-num new new_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="mosel"> <span class="n" style="color: #333;">encoded</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">hyperstacks</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
229
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">up</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">one</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">multiple</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">BigTIFF</span></span>
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<td class="diff-line-num new new_line" data-linenumber="230" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="mosel"> <span class="n" style="color: #333;">files</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="m" style="color: #099;">8</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">UTF</span><span class="p">-</span><span class="m" style="color: #099;">8</span> <span class="n" style="color: #333;">encoded</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">found</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageDescription</span></span>
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<td class="diff-line-num new new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="mosel"> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">IFD</span> <span class="n" style="color: #333;">defines</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">position</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">IFDs</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">high</span></span>
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<td class="diff-line-num new new_line" data-linenumber="232" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="mosel"> <span class="n" style="color: #333;">dimensional</span> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">,</span> <span class="n" style="color: #333;">except</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">XML</span></span>
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<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
233
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="mosel"> <span class="n" style="color: #333;">metadata</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">LSM</span><span class="p">*</span> <span class="n" style="color: #333;">stores</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">IFDs</span> <span class="n" style="color: #333;">below</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="n" style="color: #333;">but</span> <span class="n" style="color: #333;">wraps</span> <span class="n" style="color: #333;">around</span> <span class="m" style="color: #099;">32</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">StripOffsets</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">position</span> <span class="n" style="color: #333;">require</span> <span class="n" style="color: #333;">separate</span> <span class="n" style="color: #333;">unwrapping</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
236
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="mosel"> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">contains</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">bytes</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">uncompressed</span></span>
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237
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="mosel"> <span class="n" style="color: #333;">data</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">LSM</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">NDPI</span><span class="p">*</span> <span class="k" style="font-weight: 600;">uses</span> <span class="n" style="color: #333;">some</span> <span class="m" style="color: #099;">64</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">header</span><span class="p">,</span> <span class="n" style="color: #333;">IFD</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">structures</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="239" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="mosel"> <span class="n" style="color: #333;">Tag</span> <span class="n" style="color: #333;">values</span><span class="p">/</span><span class="n" style="color: #333;">offsets</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">corrected</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">high</span> <span class="n" style="color: #333;">bits</span> <span class="n" style="color: #333;">stored</span> <span class="n" style="color: #333;">after</span> <span class="n" style="color: #333;">IFD</span></span>
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<td class="diff-line-num new new_line" data-linenumber="240" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="mosel"> <span class="n" style="color: #333;">structures</span><span class="p">.</span> <span class="n" style="color: #333;">JPEG</span> <span class="n" style="color: #333;">compressed</span> <span class="n" style="color: #333;">tiles</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">dimensions</span> <span class="p">></span> <span class="m" style="color: #099;">65536</span> <span class="n" style="color: #333;">are</span> <span class="k" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">readable</span></span>
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<td class="diff-line-num new new_line" data-linenumber="241" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">libjpeg</span><span class="p">.</span> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">NDPI</span> <span class="n" style="color: #333;">files</span> <span class="p"><</span> <span class="m" style="color: #099;">4</span> <span class="n" style="color: #333;">GB</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decompress</span> <span class="n" style="color: #333;">large</span> <span class="n" style="color: #333;">JPEG</span></span>
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<td class="diff-line-num new new_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="mosel"> <span class="n" style="color: #333;">tiles</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">imagecodecs</span> <span class="n" style="color: #333;">library</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Windows</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
243
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">ScanImage</span><span class="p">*</span> <span class="n" style="color: #333;">optionally</span> <span class="n" style="color: #333;">allows</span> <span class="n" style="color: #333;">corrupt</span> <span class="n" style="color: #333;">non</span><span class="p">-</span><span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">files</span> <span class="p">></span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">GB</span><span class="p">.</span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">values</span></span>
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<td class="diff-line-num new new_line" data-linenumber="244" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
244
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">StripOffsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">StripByteCounts</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">recovered</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">constant</span></span>
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<td class="diff-line-num new new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
245
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="mosel"> <span class="n" style="color: #333;">differences</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">IFD</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tag</span> <span class="n" style="color: #333;">values</span> <span class="n" style="color: #333;">throughout</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">such</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">Python</span> <span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">stored</span></span>
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<td class="diff-line-num new new_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="mosel"> <span class="n" style="color: #333;">contiguously</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">page</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="mosel"> <span class="p">*</span> <span class="p">*</span><span class="n" style="color: #333;">GeoTIFF</span><span class="p">*</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span> <span class="n" style="color: #333;">allow</span> <span class="n" style="color: #333;">strip</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">tile</span> <span class="n" style="color: #333;">offsets</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">byte</span> <span class="n" style="color: #333;">counts</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">be</span> <span class="m" style="color: #099;">0.</span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="mosel"> <span class="n" style="color: #333;">Such</span> <span class="n" style="color: #333;">segments</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">implicitly</span> <span class="k" style="font-weight: 600;">set</span> <span class="k" style="font-weight: 600;">to</span> <span class="m" style="color: #099;">0</span> <span class="k" style="font-weight: 600;">or</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">NODATA</span> <span class="n" style="color: #333;">value</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">reading</span><span class="p">.</span></span>
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<td class="diff-line-num new new_line" data-linenumber="250" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="mosel"> <span class="n" style="color: #333;">Tifffile</span> <span class="n" style="color: #333;">can</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">sparse</span> <span class="n" style="color: #333;">files</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC251" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC252" class="line" lang="mosel"> <span class="n" style="color: #333;">Other</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">reading</span> <span class="n" style="color: #333;">scientific</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Python</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC253" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC345" class="line" lang="plaintext"> * `Python-bioformats <https://github.com/CellProfiler/python-bioformats>`_</span>
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<pre style="margin: 0;">-<span id="LC346" class="line" lang="plaintext"> * `Imread <https://github.com/luispedro/imread>`_</span>
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347
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<pre style="margin: 0;">-<span id="LC347" class="line" lang="plaintext"> * `GDAL <https://github.com/OSGeo/gdal/tree/master/gdal/swig/python>`_</span>
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<pre style="margin: 0;">-<span id="LC348" class="line" lang="plaintext"> * `OpenSlide-python <https://github.com/openslide/openslide-python>`_</span>
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<pre style="margin: 0;">-<span id="LC349" class="line" lang="plaintext"> * `PyLibTiff <https://github.com/pearu/pylibtiff>`_</span>
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350
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<pre style="margin: 0;">-<span id="LC350" class="line" lang="plaintext"> * `SimpleITK <http://www.simpleitk.org>`_</span>
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351
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<pre style="margin: 0;">-<span id="LC351" class="line" lang="plaintext"> * `PyLSM <https://launchpad.net/pylsm>`_</span>
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352
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<pre style="margin: 0;">-<span id="LC352" class="line" lang="plaintext"> * `PyMca.TiffIO.py <https://github.com/vasole/pymca>`_ (same as fabio.TiffIO)</span>
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353
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<pre style="margin: 0;">-<span id="LC353" class="line" lang="plaintext"> * `BioImageXD.Readers <http://www.bioimagexd.net/>`_</span>
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<pre style="margin: 0;">-<span id="LC354" class="line" lang="plaintext"> * `Cellcognition.io <http://cellcognition.org/>`_</span>
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<pre style="margin: 0;">-<span id="LC355" class="line" lang="plaintext"> * `pymimage <https://github.com/ardoi/pymimage>`_</span>
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<pre style="margin: 0;">-<span id="LC356" class="line" lang="plaintext"> * `pytiff <https://github.com/FZJ-INM1-BDA/pytiff>`_</span>
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<pre style="margin: 0;">-<span id="LC357" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">-<span id="LC358" class="line" lang="plaintext"> Acknowledgements</span>
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359
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<pre style="margin: 0;">-<span id="LC359" class="line" lang="plaintext"> ----------------</span>
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<pre style="margin: 0;">-<span id="LC360" class="line" lang="plaintext"> * Egor Zindy, University of Manchester, for lsm_scan_info specifics.</span>
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361
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<pre style="margin: 0;">-<span id="LC361" class="line" lang="plaintext"> * Wim Lewis for a bug fix and some LSM functions.</span>
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362
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<pre style="margin: 0;">-<span id="LC362" class="line" lang="plaintext"> * Hadrien Mary for help on reading MicroManager files.</span>
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<pre style="margin: 0;">-<span id="LC363" class="line" lang="plaintext"> * Christian Kliche for help writing tiled and color-mapped files.</span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">CellProfiler</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">-</span><span class="n" style="color: #333;">bioformats</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Imread</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">luispedro</span><span class="p">/</span><span class="n" style="color: #333;">imread</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">GDAL</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">OSGeo</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">tree</span><span class="p">/</span><span class="n" style="color: #333;">master</span><span class="p">/</span><span class="n" style="color: #333;">gdal</span><span class="p">/</span><span class="n" style="color: #333;">swig</span><span class="p">/</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">OpenSlide</span><span class="p">-</span><span class="n" style="color: #333;">python</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">/</span><span class="n" style="color: #333;">openslide</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLibTiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">pearu</span><span class="p">/</span><span class="n" style="color: #333;">pylibtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">SimpleITK</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">/</span><span class="n" style="color: #333;">SimpleITK</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyLSM</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">launchpad</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/</span><span class="n" style="color: #333;">pylsm</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">PyMca</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">.</span><span class="n" style="color: #333;">py</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vasole</span><span class="p">/</span><span class="n" style="color: #333;">pymca</span><span class="p">>`</span><span class="n" style="color: #333;">_</span> <span class="p">(</span><span class="n" style="color: #333;">same</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fabio</span><span class="p">.</span><span class="n" style="color: #333;">TiffIO</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="262" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">BioImageXD</span><span class="p">.</span><span class="n" style="color: #333;">Readers</span> <span class="p"><</span><span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">bioimagexd</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">CellCognition</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">cellcognition</span><span class="p">-</span><span class="n" style="color: #333;">project</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/>`</span><span class="n" style="color: #333;">_</span></span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pymimage</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">ardoi</span><span class="p">/</span><span class="n" style="color: #333;">pymimage</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">pytiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">FZJ</span><span class="p">-</span><span class="n" style="color: #333;">INM1</span><span class="p">-</span><span class="n" style="color: #333;">BDA</span><span class="p">/</span><span class="n" style="color: #333;">pytiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">ScanImageTiffReaderPython</span></span>
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<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gitlab</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">vidriotech</span><span class="p">/</span><span class="n" style="color: #333;">scanimagetiffreader</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">bigtiff</span> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">bigtiff</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="mosel"> <span class="n" style="color: #333;">Some</span> <span class="n" style="color: #333;">libraries</span> <span class="n" style="color: #333;">are</span> <span class="n" style="color: #333;">using</span> <span class="n" style="color: #333;">tifffile</span> <span class="k" style="font-weight: 600;">to</span> <span class="nb" style="color: #0086b3;">write</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span><span class="p">:</span></span>
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271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">Apeer</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">library</span></span>
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">github</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">micro</span><span class="p">/</span><span class="n" style="color: #333;">apeer</span><span class="p">-</span><span class="n" style="color: #333;">ometiff</span><span class="p">-</span><span class="n" style="color: #333;">library</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="mosel"> <span class="p">*</span> <span class="p">`</span><span class="n" style="color: #333;">Allen</span> <span class="n" style="color: #333;">Institute</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Cell</span> <span class="n" style="color: #333;">Science</span> <span class="n" style="color: #333;">imageio</span></span>
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="mosel"> <span class="p"><</span><span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">pypi</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">project</span><span class="p">/</span><span class="n" style="color: #333;">aicsimageio</span><span class="p">>`</span><span class="n" style="color: #333;">_</span></span>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="mosel"> <span class="n" style="color: #333;">References</span></span>
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="mosel"> <span class="p">----------</span></span>
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<pre style="margin: 0;">-<span id="LC367" class="line" lang="plaintext"> 1<span class="idiff left right">)</span> TIFF 6.0 Specification and Supplements. Adobe Systems Incorporated.</span>
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="mosel"> <span class="m" style="color: #099;">1<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">Specification</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Supplements</span><span class="p">.</span> <span class="n" style="color: #333;">Adobe</span> <span class="n" style="color: #333;">Systems</span> <span class="n" style="color: #333;">Incorporated</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">adobe</span><span class="p">.</span><span class="n" style="color: #333;">io</span><span class="p">/</span><span class="n" style="color: #333;">open</span><span class="p">/</span><span class="n" style="color: #333;">standards</span><span class="p">/</span><span class="n" style="color: #333;">TIFF</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;">-<span id="LC369" class="line" lang="plaintext"> 2<span class="idiff left right">)</span> TIFF File Format FAQ. https://www.awaresystems.be/imaging/tiff/faq.html</span>
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<pre style="margin: 0;">-<span id="LC370" class="line" lang="plaintext"> 3<span class="idiff left right">)</span> MetaMorph Stack (STK) Image File Format.</span>
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="mosel"> <span class="m" style="color: #099;">2<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">FAQ</span><span class="p">.</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">awaresystems</span><span class="p">.</span><span class="n" style="color: #333;">be</span><span class="p">/</span><span class="n" style="color: #333;">imaging</span><span class="p">/</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span><span class="n" style="color: #333;">faq</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="mosel"> <span class="m" style="color: #099;">3<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">MetaMorph</span> <span class="n" style="color: #333;">Stack</span> <span class="p">(</span><span class="n" style="color: #333;">STK</span><span class="p">)</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span><span class="p">.</span></span>
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371
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<pre style="margin: 0;"> <span id="LC283" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">mdc</span><span class="p">.</span><span class="n" style="color: #333;">custhelp</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">app</span><span class="p">/</span><span class="n" style="color: #333;">answers</span><span class="p">/</span><span class="n" style="color: #333;">detail</span><span class="p">/</span><span class="n" style="color: #333;">a_id</span><span class="p">/</span><span class="m" style="color: #099;">18862</span></span>
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<pre style="margin: 0;">-<span id="LC372" class="line" lang="plaintext"> 4<span class="idiff left right">)</span> Image File Format Description LSM 5/7 Release 6.0 (ZEN 2010).</span>
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284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="mosel"> <span class="m" style="color: #099;">4<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">Description</span> <span class="n" style="color: #333;">LSM</span> <span class="m" style="color: #099;">5</span><span class="p">/</span><span class="m" style="color: #099;">7</span> <span class="n" style="color: #333;">Release</span> <span class="m" style="color: #099;">6.0</span> <span class="p">(</span><span class="n" style="color: #333;">ZEN</span> <span class="m" style="color: #099;">2010</span><span class="p">).</span></span>
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<pre style="margin: 0;"> <span id="LC285" class="line" lang="mosel"> <span class="n" style="color: #333;">Carl</span> <span class="n" style="color: #333;">Zeiss</span> <span class="n" style="color: #333;">MicroImaging</span> <span class="n" style="color: #333;">GmbH</span><span class="p">.</span> <span class="n" style="color: #333;">BioSciences</span><span class="p">.</span> <span class="n" style="color: #333;">May</span> <span class="m" style="color: #099;">10</span><span class="p">,</span> <span class="m" style="color: #099;">2011</span></span>
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374
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<pre style="margin: 0;">-<span id="LC374" class="line" lang="plaintext"> 5<span class="idiff left right">)</span> The OME-TIFF format.</span>
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="mosel"> <span class="m" style="color: #099;">5<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">The</span> <span class="n" style="color: #333;">OME</span><span class="p">-</span><span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">format</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC287" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">docs</span><span class="p">.</span><span class="n" style="color: #333;">openmicroscopy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="k" style="font-weight: 600;">model</span><span class="p">/</span><span class="m" style="color: #099;">5.6.4</span><span class="p">/</span><span class="n" style="color: #333;">ome</span><span class="p">-</span><span class="n" style="color: #333;">tiff</span><span class="p">/</span></span>
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<pre style="margin: 0;">-<span id="LC376" class="line" lang="plaintext"> 6<span class="idiff left right">)</span> UltraQuant(r) Version 6.0 for Windows Start-Up Guide.</span>
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="mosel"> <span class="m" style="color: #099;">6<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">UltraQuant</span><span class="p">(</span><span class="n" style="color: #333;">r</span><span class="p">)</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">6.0</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">Windows</span> <span class="n" style="color: #333;">Start</span><span class="p">-</span><span class="n" style="color: #333;">Up</span> <span class="n" style="color: #333;">Guide</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC289" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">ultralum</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">images</span><span class="p">%</span><span class="m" style="color: #099;">20ul</span><span class="n" style="color: #333;">tralum</span><span class="p">/</span><span class="n" style="color: #333;">pdf</span><span class="p">/</span><span class="n" style="color: #333;">UQStart</span><span class="p">%</span><span class="m" style="color: #099;">20U</span><span class="n" style="color: #333;">p</span><span class="p">%</span><span class="m" style="color: #099;">20</span><span class="n" style="color: #333;">Guide</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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<pre style="margin: 0;">-<span id="LC378" class="line" lang="plaintext"> 7<span class="idiff left right">)</span> Micro-Manager File Formats.</span>
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="mosel"> <span class="m" style="color: #099;">7<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Formats</span><span class="p">.</span></span>
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379
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">micro</span><span class="p">-</span><span class="n" style="color: #333;">manager</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span><span class="n" style="color: #333;">Micro</span><span class="p">-</span><span class="n" style="color: #333;">Manager_File_Formats</span></span>
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<pre style="margin: 0;">-<span id="LC380" class="line" lang="plaintext"> 8<span class="idiff left right">)</span> Tags for TIFF and Related Specifications. Digital Preservation.</span>
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="mosel"> <span class="m" style="color: #099;">8<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">Tags</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">TIFF</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Related</span> <span class="n" style="color: #333;">Specifications</span><span class="p">.</span> <span class="n" style="color: #333;">Digital</span> <span class="n" style="color: #333;">Preservation</span><span class="p">.</span></span>
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="mosel"> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">.</span><span class="n" style="color: #333;">gov</span><span class="p">/</span><span class="n" style="color: #333;">preservation</span><span class="p">/</span><span class="n" style="color: #333;">digital</span><span class="p">/</span><span class="n" style="color: #333;">formats</span><span class="p">/</span><span class="n" style="color: #333;">content</span><span class="p">/</span><span class="n" style="color: #333;">tiff_tags</span><span class="p">.</span><span class="n" style="color: #333;">shtml</span></span>
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<pre style="margin: 0;">-<span id="LC382" class="line" lang="plaintext"> 9<span class="idiff left right">)</span> ScanImage BigTiff Specification - ScanImage 2016.</span>
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294
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="mosel"> <span class="m" style="color: #099;">9<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">ScanImage</span> <span class="n" style="color: #333;">BigTiff</span> <span class="n" style="color: #333;">Specification</span> <span class="p">-</span> <span class="n" style="color: #333;">ScanImage</span> <span class="m" style="color: #099;">2016.</span></span>
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383
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295
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">scanimage</span><span class="p">.</span><span class="n" style="color: #333;">vidriotechnologies</span><span class="p">.</span><span class="n" style="color: #333;">com</span><span class="p">/</span><span class="n" style="color: #333;">display</span><span class="p">/</span><span class="n" style="color: #333;">SI2016</span><span class="p">/</span></span>
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384
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296
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="mosel"> <span class="n" style="color: #333;">ScanImage</span><span class="p">+</span><span class="n" style="color: #333;">BigTiff</span><span class="p">+</span><span class="n" style="color: #333;">Specification</span></span>
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385
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<pre style="margin: 0;">-<span id="LC385" class="line" lang="plaintext"> 10<span class="idiff left right">)</span> CIPA DC-008-2016: Exchangeable image file format for digital still cameras:</span>
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<td class="diff-line-num new old_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="297" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
297
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="mosel"> <span class="m" style="color: #099;">10<span class="idiff left right">.</span></span> <span class="n" style="color: #333;">CIPA</span> <span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">:</span> <span class="n" style="color: #333;">Exchangeable</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">format</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">digital</span> <span class="n" style="color: #333;">still</span> <span class="n" style="color: #333;">cameras</span><span class="p">:</span></span>
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386
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298
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="mosel"> <span class="n" style="color: #333;">Exif</span> <span class="k" style="font-weight: 600;">Version</span> <span class="m" style="color: #099;">2.31</span><span class="p">.</span></span>
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387
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299
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="mosel"> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">www</span><span class="p">.</span><span class="n" style="color: #333;">cipa</span><span class="p">.</span><span class="n" style="color: #333;">jp</span><span class="p">/</span><span class="n" style="color: #333;">std</span><span class="p">/</span><span class="n" style="color: #333;">documents</span><span class="p">/</span><span class="n" style="color: #333;">e</span><span class="p">/</span><span class="n" style="color: #333;">DC</span><span class="p">-</span><span class="m" style="color: #099;">008</span><span class="p">-</span><span class="n" style="color: #333;">Translation</span><span class="p">-</span><span class="m" style="color: #099;">2016</span><span class="p">-</span><span class="n" style="color: #333;">E</span><span class="p">.</span><span class="n" style="color: #333;">pdf</span></span>
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388
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<pre style="margin: 0;">-<span id="LC388" class="line" lang="plaintext"> 11) ZIF, the Zoomable Image File format. http://zif.photo/</span>
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<pre style="margin: 0;">+<span id="LC300" class="line" lang="mosel"> <span class="m" style="color: #099;">11.</span> <span class="n" style="color: #333;">ZIF</span><span class="p">,</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">Zoomable</span> <span class="n" style="color: #333;">Image</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">format</span><span class="p">.</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">zif</span><span class="p">.</span><span class="n" style="color: #333;">photo</span><span class="p">/</span></span>
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="mosel"> <span class="m" style="color: #099;">12.</span> <span class="n" style="color: #333;">GeoTIFF</span> <span class="n" style="color: #333;">File</span> <span class="n" style="color: #333;">Format</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">gdal</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">drivers</span><span class="p">/</span><span class="n" style="color: #333;">raster</span><span class="p">/</span><span class="n" style="color: #333;">gtiff</span><span class="p">.</span><span class="n" style="color: #333;">html</span></span>
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="mosel"> <span class="n" style="color: #333;">Examples</span></span>
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304
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<pre style="margin: 0;"> <span id="LC304" class="line" lang="mosel"> <span class="p">--------</span></span>
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392
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305
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<pre style="margin: 0;"> <span id="LC305" class="line" lang="mosel"> <span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="m" style="color: #099;">3</span><span class="n" style="color: #333;">D</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">multi</span><span class="p">-</span><span class="n" style="color: #333;">page</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">-</span><span class="n" style="color: #333;">bit</span> <span class="n" style="color: #333;">grayscale</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC394" class="line" lang="plaintext"> >>> data = numpy.random.randint(0, 2**1<span class="idiff left right">6</span>, (4, 301, 219), 'uint16')</span>
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">**</span><span class="m" style="color: #099;">1<span class="idiff left right">2</span></span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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309
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">whole</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="402" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="315" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -402,7 +315,7 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image_stack</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;"> <span id="LC316" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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404
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<pre style="margin: 0;"> <span id="LC317" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC405" class="line" lang="plaintext"> Read the image from <span class="idiff left right">first page (IFD) in the TIFF file</span>:</span>
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;"><span class="idiff left">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">in</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">TIFF</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">file</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff">as</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">numpy</span></span><span class="idiff"> </span><span class="k" style="font-weight: 600;"><span class="idiff right">array</span></span><span class="p">:</span></span>
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406
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<pre style="margin: 0;"> <span id="LC319" class="line" lang="mosel"> </span>
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407
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<pre style="margin: 0;"> <span id="LC320" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC321" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -424,14 +337,36 @@ Description: Read and write TIFF(r) files</td>
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424
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<pre style="margin: 0;"> <span id="LC337" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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425
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338
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<pre style="margin: 0;"> <span id="LC338" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'axes'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'TZCYX'</span><span class="p">})</span></span>
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426
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339
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<pre style="margin: 0;"> <span id="LC339" class="line" lang="mosel"> </span>
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427
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<pre style="margin: 0;">-<span id="LC427" class="line" lang="plaintext"> Save a volume with xyz voxel size 2.6755x2.6755x3.9474 µm^3 to ImageJ file:</span>
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="mosel"> <span class="n" style="color: #333;">Save</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">volume</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">xyz</span> <span class="n" style="color: #333;">voxel</span> <span class="n" style="color: #333;">size</span> <span class="m" style="color: #099;">2.6755</span><span class="n" style="color: #333;">x2</span><span class="m" style="color: #099;">.6755</span><span class="n" style="color: #333;">x3</span><span class="m" style="color: #099;">.9474</span> <span class="n" style="color: #333;">micron</span><span class="p">^</span><span class="m" style="color: #099;">3</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">ImageJ</span></span>
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="mosel"> <span class="n" style="color: #333;">formatted</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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428
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342
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<pre style="margin: 0;"> <span id="LC342" class="line" lang="mosel"> </span>
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429
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343
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<pre style="margin: 0;"> <span id="LC343" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">volume</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randn</span><span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">*</span><span class="m" style="color: #099;">256</span><span class="p">).</span><span class="n" style="color: #333;">astype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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430
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344
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<pre style="margin: 0;"> <span id="LC344" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">volume</span><span class="p">.</span><span class="n" style="color: #333;">shape</span> <span class="p">=</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">1</span> <span class="p">#</span> <span class="n" style="color: #333;">dimensions</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">TZCYXS</span> <span class="n" style="color: #333;">order</span></span>
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431
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<pre style="margin: 0;"> <span id="LC345" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">volume</span><span class="p">,</span> <span class="n" style="color: #333;">imagej</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">,</span> <span class="n" style="color: #333;">resolution</span><span class="p">=(</span><span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">,</span> <span class="m" style="color: #099;">1.</span><span class="p">/</span><span class="m" style="color: #099;">2.6755</span><span class="p">),</span></span>
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432
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346
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<pre style="margin: 0;"> <span id="LC346" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">metadata</span><span class="p">={</span><span class="s1" style="color: #d14;">'spacing'</span><span class="p">:</span> <span class="m" style="color: #099;">3.947368</span><span class="p">,</span> <span class="s1" style="color: #d14;">'unit'</span><span class="p">:</span> <span class="s1" style="color: #d14;">'um'</span><span class="p">})</span></span>
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433
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347
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<pre style="margin: 0;"> <span id="LC347" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC434" class="line" lang="plaintext"> Read hyperstack and metadata from ImageJ file:</span>
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348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="mosel"> <span class="n" style="color: #333;">Get</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">volume</span> <span class="n" style="color: #333;">stored</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tif</span> <span class="p">=</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="351" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">len</span><span class="p">(</span><span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">)</span> <span class="p">#</span> <span class="n" style="color: #333;">number</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">file</span></span>
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="mosel"> <span class="m" style="color: #099;">57</span></span>
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span></span>
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'YX'</span></span>
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">series</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]</span> <span class="p">#</span> <span class="n" style="color: #333;">get</span> <span class="n" style="color: #333;">shape</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">dtype</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span></span>
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">57</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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363
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<pre style="margin: 0;">+<span id="LC363" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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<pre style="margin: 0;">+<span id="LC364" class="line" lang="mosel"> <span class="n" style="color: #333;">dtype</span><span class="p">(</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series</span><span class="p">.</span><span class="n" style="color: #333;">axes</span></span>
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366
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'ZYX'</span></span>
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<pre style="margin: 0;">+<span id="LC367" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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368
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="mosel"> </span>
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369
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">hyperstack</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">metadata</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">ImageJ</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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435
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370
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<pre style="margin: 0;"> <span id="LC370" class="line" lang="mosel"> </span>
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436
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371
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<pre style="margin: 0;"> <span id="LC371" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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437
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372
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<pre style="margin: 0;"> <span id="LC372" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">imagej_hyperstack</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -441,35 +376,58 @@ Description: Read and write TIFF(r) files</td>
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441
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376
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<pre style="margin: 0;"> <span id="LC376" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imagej_metadata</span><span class="p">[</span><span class="s1" style="color: #d14;">'slices'</span><span class="p">]</span></span>
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442
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377
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<pre style="margin: 0;"> <span id="LC377" class="line" lang="mosel"> <span class="m" style="color: #099;">57</span></span>
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443
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378
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<pre style="margin: 0;"> <span id="LC378" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
379
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="s2" style="color: #d14;">"XResolution"</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">first</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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380
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
381
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<pre style="margin: 0;">+<span id="LC381" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="382" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
382
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<pre style="margin: 0;">+<span id="LC382" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tag</span> <span class="p">=</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">].</span><span class="n" style="color: #333;">tags</span><span class="p">[</span><span class="s1" style="color: #d14;">'XResolution'</span><span class="p">]</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">2000</span><span class="p">,</span> <span class="m" style="color: #099;">5351</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
385
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<pre style="margin: 0;">+<span id="LC385" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span></span>
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<td class="diff-line-num new new_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
386
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'XResolution'</span></span>
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387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">code</span></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="mosel"> <span class="m" style="color: #099;">282</span></span>
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<td class="diff-line-num new new_line" data-linenumber="389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="k" style="font-weight: 600;">count</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="mosel"> <span class="m" style="color: #099;">1</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">dtype</span></span>
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392
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<pre style="margin: 0;">+<span id="LC392" class="line" lang="mosel"> <span class="s1" style="color: #d14;">'2I'</span></span>
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393
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<pre style="margin: 0;">+<span id="LC393" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="394" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
394
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<pre style="margin: 0;">+<span id="LC394" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">selected</span> <span class="k" style="font-weight: 600;">range</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="395" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
395
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<pre style="margin: 0;">+<span id="LC395" class="line" lang="mosel"> </span>
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<td class="diff-line-num new new_line" data-linenumber="396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
396
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<pre style="margin: 0;">+<span id="LC396" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">imread</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">key</span><span class="p">=</span><span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">40</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC397" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">image</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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398
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<pre style="margin: 0;">+<span id="LC398" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">18</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">)</span></span>
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399
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<pre style="margin: 0;">+<span id="LC399" class="line" lang="mosel"> </span>
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444
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400
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<pre style="margin: 0;"> <span id="LC400" class="line" lang="mosel"> <span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">empty</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="nb" style="color: #0086b3;">write</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">memory</span><span class="p">-</span><span class="n" style="color: #333;">mapped</span> <span class="n" style="color: #333;">numpy</span> <span class="k" style="font-weight: 600;">array</span><span class="p">:</span></span>
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445
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401
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<pre style="margin: 0;"> <span id="LC401" class="line" lang="mosel"> </span>
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446
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402
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<pre style="margin: 0;"> <span id="LC402" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">256</span><span class="p">,</span> <span class="m" style="color: #099;">256</span><span class="p">),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'float32'</span><span class="p">)</span></span>
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447
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<td class="diff-line-num new_line" data-linenumber="403" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
403
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<pre style="margin: 0;"> <span id="LC403" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span> <span class="p">=</span> <span class="m" style="color: #099;">1.0</span></span>
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448
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404
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<pre style="margin: 0;"> <span id="LC404" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">.</span><span class="n" style="color: #333;">flush</span><span class="p">()</span></span>
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449
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<pre style="margin: 0;">-<span id="LC449" class="line" lang="plaintext"> >>> memmap_image.shape, memmap_image.dtype</span>
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450
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<pre style="margin: 0;">-<span id="LC450" class="line" lang="plaintext"> ((256, 256), dtype('float32'))</span>
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451
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405
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<pre style="margin: 0;"> <span id="LC405" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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452
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406
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<pre style="margin: 0;"> <span id="LC406" class="line" lang="mosel"> </span>
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453
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<pre style="margin: 0;">-<span id="LC453" class="line" lang="plaintext"> Memory-map image data in the TIFF file:</span>
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407
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<pre style="margin: 0;">+<span id="LC407" class="line" lang="mosel"> <span class="n" style="color: #333;">Memory</span><span class="p">-</span><span class="n" style="color: #333;">map</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;"><span class="idiff left">of</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">the</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">first</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">page</span></span><span class="idiff right"> </span><span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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454
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408
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<pre style="margin: 0;"> <span id="LC408" class="line" lang="mosel"> </span>
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409
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<pre style="margin: 0;"> <span id="LC409" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span> <span class="p">=</span> <span class="n" style="color: #333;">memmap</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">page</span><span class="p">=</span><span class="m" style="color: #099;">0</span><span class="p">)</span></span>
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456
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410
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">memmap_image</span><span class="p">[</span><span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">]</span></span>
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457
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411
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<pre style="margin: 0;"> <span id="LC411" class="line" lang="mosel"> <span class="m" style="color: #099;">1.0</span></span>
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458
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412
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<pre style="margin: 0;"> <span id="LC412" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">del</span> <span class="n" style="color: #333;">memmap_image</span></span>
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459
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413
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<pre style="margin: 0;"> <span id="LC413" class="line" lang="mosel"> </span>
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460
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<pre style="margin: 0;">-<span id="LC460" class="line" lang="plaintext"> Successively append images to a BigTIFF file:</span>
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414
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<pre style="margin: 0;">+<span id="LC414" class="line" lang="mosel"> <span class="n" style="color: #333;">Successively</span> <span class="n" style="color: #333;">append</span> <span class="n" style="color: #333;">images</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">BigTIFF</span> <span class="n" style="color: #333;">file</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">which</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">can</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">exceed</span></span><span class="idiff"> </span><span class="m" style="color: #099;"><span class="idiff">4</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">GB</span></span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC416" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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463
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<pre style="margin: 0;"> <span id="LC417" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">bigtiff</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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464
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<pre style="margin: 0;"> <span id="LC418" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span></span>
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<pre style="margin: 0;"> <span id="LC419" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">],</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC420" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC421" class="line" lang="mosel"> <span class="n" style="color: #333;">Append</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">existing</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC422" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC423" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">,</span> <span class="m" style="color: #099;">3</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint8'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC424" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="p">,</span> <span class="n" style="color: #333;">append</span><span class="p">=</span><span class="nb" style="color: #0086b3;">True</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC425" class="line" lang="mosel"> </span>
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467
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<pre style="margin: 0;"> <span id="LC426" class="line" lang="mosel"> <span class="n" style="color: #333;">Iterate</span> <span class="n" style="color: #333;">over</span> <span class="n" style="color: #333;">pages</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">tags</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">successively</span> <span class="nb" style="color: #0086b3;">read</span> <span class="n" style="color: #333;">images</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC427" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC428" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffFile</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC470" class="line" lang="plaintext"> ... image_stack = tif.asarray()</span>
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<pre style="margin: 0;"> <span id="LC429" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">page</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">pages</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC472" class="line" lang="plaintext"> ... for tag in page.tags<span class="idiff left right">.values()</span>:</span>
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<pre style="margin: 0;">+<span id="LC430" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">tag</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">tags</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC431" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tag_name</span><span class="p">,</span> <span class="n" style="color: #333;">tag_value</span> <span class="p">=</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">tag</span><span class="p">.</span><span class="n" style="color: #333;">value</span></span>
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432
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<pre style="margin: 0;"> <span id="LC432" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">image</span> <span class="p">=</span> <span class="n" style="color: #333;">page</span><span class="p">.</span><span class="n" style="color: #333;">asarray</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC433" class="line" lang="mosel"> </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="437" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -479,7 +437,7 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC437" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data1</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">randint</span><span class="p">(</span><span class="m" style="color: #099;">0</span><span class="p">,</span> <span class="m" style="color: #099;">255</span><span class="p">,</span> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">),</span> <span class="s1" style="color: #d14;">'uint16'</span><span class="p">)</span></span>
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480
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438
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<pre style="margin: 0;"> <span id="LC438" class="line" lang="mosel"> <span class="p">>>></span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">TiffWriter</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">tif</span><span class="p">:</span></span>
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481
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439
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<pre style="margin: 0;"> <span id="LC439" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data0</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'rgb'</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC482" class="line" lang="plaintext"> ... tif.save(data1, compress=6, photometric='minisblack')</span>
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440
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<pre style="margin: 0;">+<span id="LC440" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">tif</span><span class="p">.</span><span class="n" style="color: #333;">save</span><span class="p">(</span><span class="n" style="color: #333;">data1</span><span class="p">,</span> <span class="n" style="color: #333;">compress</span><span class="p">=</span><span class="m" style="color: #099;">6</span><span class="p">,</span> <span class="n" style="color: #333;">photometric</span><span class="p">=</span><span class="s1" style="color: #d14;">'minisblack'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">contiguous</span></span><span class="p"><span class="idiff">=</span></span><span class="nb" style="color: #0086b3;"><span class="idiff right">False</span></span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC441" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC442" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">second</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">series</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC443" class="line" lang="mosel"> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="487" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="445" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -487,7 +445,7 @@ Description: Read and write TIFF(r) files</td>
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445
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<pre style="margin: 0;"> <span id="LC445" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">series1</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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488
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446
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<pre style="margin: 0;"> <span id="LC446" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">5</span><span class="p">,</span> <span class="m" style="color: #099;">301</span><span class="p">,</span> <span class="m" style="color: #099;">219</span><span class="p">)</span></span>
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489
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447
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<pre style="margin: 0;"> <span id="LC447" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">-<span id="LC490" class="line" lang="plaintext"> Read an image stack from a se<span class="idiff left right">quence</span> of TIFF files with a file name pattern:</span>
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448
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<pre style="margin: 0;">+<span id="LC448" class="line" lang="mosel"> <span class="n" style="color: #333;">Read</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">image</span> <span class="n" style="color: #333;">stack</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">se<span class="idiff left right">ries</span></span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">files</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">name</span> <span class="n" style="color: #333;">pattern</span><span class="p">:</span></span>
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491
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<pre style="margin: 0;"> <span id="LC449" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC450" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T001.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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493
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<pre style="margin: 0;"> <span id="LC451" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp_C001T002.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="nb" style="color: #0086b3;">random</span><span class="p">.</span><span class="n" style="color: #333;">rand</span><span class="p">(</span><span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">))</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -500,18 +458,22 @@ Description: Read and write TIFF(r) files</td>
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<pre style="margin: 0;"> <span id="LC458" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span></span>
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<pre style="margin: 0;"> <span id="LC459" class="line" lang="mosel"> <span class="p">(</span><span class="m" style="color: #099;">1</span><span class="p">,</span> <span class="m" style="color: #099;">2</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC460" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC461" class="line" lang="mosel"> <span class="n" style="color: #333;">Create</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">TIFF</span> <span class="n" style="color: #333;">file</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">an</span> <span class="n" style="color: #333;">iterator</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">tiles</span><span class="p">:</span></span>
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462
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<pre style="margin: 0;">+<span id="LC462" class="line" lang="mosel"> </span>
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<pre style="margin: 0;">+<span id="LC463" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">def</span> <span class="n" style="color: #333;">tiles</span><span class="p">():</span></span>
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<pre style="margin: 0;">+<span id="LC464" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">data</span> <span class="p">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">*</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">).</span><span class="n" style="color: #333;">reshape</span><span class="p">((</span><span class="m" style="color: #099;">3</span><span class="p">*</span><span class="m" style="color: #099;">4</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC465" class="line" lang="mosel"> <span class="p">...</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">i</span> <span class="k" style="font-weight: 600;">in</span> <span class="k" style="font-weight: 600;">range</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="m" style="color: #099;">0</span><span class="p">]):</span> <span class="n" style="color: #333;">yield</span> <span class="n" style="color: #333;">data</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC466" class="line" lang="mosel"> <span class="p">>>></span> <span class="n" style="color: #333;">imwrite</span><span class="p">(</span><span class="s1" style="color: #d14;">'temp.tif'</span><span class="p">,</span> <span class="n" style="color: #333;">tiles</span><span class="p">(),</span> <span class="n" style="color: #333;">dtype</span><span class="p">=</span><span class="s1" style="color: #d14;">'uint16'</span><span class="p">,</span> <span class="n" style="color: #333;">shape</span><span class="p">=(</span><span class="m" style="color: #099;">48</span><span class="p">,</span> <span class="m" style="color: #099;">64</span><span class="p">),</span> <span class="n" style="color: #333;">tile</span><span class="p">=(</span><span class="m" style="color: #099;">16</span><span class="p">,</span> <span class="m" style="color: #099;">16</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC467" class="line" lang="mosel"> </span>
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<pre style="margin: 0;"> <span id="LC468" class="line" lang="mosel"><span class="n" style="color: #333;">Platform</span><span class="p">:</span> <span class="n" style="color: #333;">any</span></span>
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<pre style="margin: 0;"> <span id="LC469" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Development</span> <span class="n" style="color: #333;">Status</span> <span class="p">::</span> <span class="m" style="color: #099;">4</span> <span class="p">-</span> <span class="n" style="color: #333;">Beta</span></span>
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<pre style="margin: 0;"> <span id="LC470" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">License</span> <span class="p">::</span> <span class="n" style="color: #333;">OSI</span> <span class="n" style="color: #333;">Approved</span> <span class="p">::</span> <span class="n" style="color: #333;">BSD</span> <span class="n" style="color: #333;">License</span></span>
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<pre style="margin: 0;"> <span id="LC471" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Science</span><span class="p">/</span><span class="n" style="color: #333;">Research</span></span>
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<pre style="margin: 0;"> <span id="LC472" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Intended</span> <span class="n" style="color: #333;">Audience</span> <span class="p">::</span> <span class="n" style="color: #333;">Developers</span></span>
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<pre style="margin: 0;"> <span id="LC473" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Operating</span> <span class="nf" style="color: #900; font-weight: 600;">System</span> <span class="p">::</span> <span class="n" style="color: #333;">OS</span> <span class="n" style="color: #333;">Independent</span></span>
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<pre style="margin: 0;">-<span id="LC509" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 2</span>
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<pre style="margin: 0;">-<span id="LC510" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 2.7</span>
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<pre style="margin: 0;">-<span id="LC511" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3</span>
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<pre style="margin: 0;">-<span id="LC512" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3.4</span>
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513
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<pre style="margin: 0;">-<span id="LC513" class="line" lang="plaintext">Classifier: Programming Language :: Python :: 3.5</span>
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474
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<pre style="margin: 0;">+<span id="LC474" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3</span> <span class="p">::</span> <span class="n" style="color: #333;">Only</span></span>
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514
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<td class="diff-line-num new_line" data-linenumber="475" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
475
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<pre style="margin: 0;"> <span id="LC475" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.6</span></span>
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515
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<td class="diff-line-num new_line" data-linenumber="476" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
476
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<pre style="margin: 0;"> <span id="LC476" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.7</span></span>
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516
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<td class="diff-line-num new_line old" data-linenumber="477" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC516" class="line" lang="plaintext">Requires-Python: >=2.7</span>
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<td class="diff-line-num new new_line" data-linenumber="477" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
477
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<pre style="margin: 0;">+<span id="LC477" class="line" lang="mosel"><span class="n" style="color: #333;">Classifier</span><span class="p">:</span> <span class="n" style="color: #333;">Programming</span> <span class="n" style="color: #333;">Language</span> <span class="p">::</span> <span class="n" style="color: #333;">Python</span> <span class="p">::</span> <span class="m" style="color: #099;">3.8</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="478" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
478
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<pre style="margin: 0;">+<span id="LC478" class="line" lang="mosel"><span class="n" style="color: #333;">Requires</span><span class="p">-</span><span class="n" style="color: #333;">Python</span><span class="p">:</span> <span class="p">>=</span><span class="m" style="color: #099;">3.6</span></span>
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517
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479
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<pre style="margin: 0;"> <span id="LC479" class="line" lang="mosel"><span class="n" style="color: #333;">Provides</span><span class="p">-</span><span class="n" style="color: #333;">Extra</span><span class="p">:</span> <span class="n" style="color: #333;">all</span></span></pre>
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<li id="011cbb90323ac69f4f6e70b621d4fc3319649927">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#011cbb90323ac69f4f6e70b621d4fc3319649927"><strong>tifffile.egg-info/SOURCES.txt</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">ACKNOWLEDGEMENTS.rst</span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">CHANGES.rst</span>
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1
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">LICENSE</span>
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2
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">MANIFEST.in</span>
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3
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">README.rst</span>
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4
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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">setup.py</span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">setup_tiffile.py</span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">tiffile.py</span>
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7
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">tests/conftest.py</span>
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8
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">tests/test_tifffile.py</span>
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9
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">tifffile/__init__.py</span>
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<li id="6000dbe87c32bc435db544e8382e5f5b92e11e77">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#6000dbe87c32bc435db544e8382e5f5b92e11e77"><strong>tifffile.egg-info/requires.txt</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">numpy>=1.11.3</span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">[:platform_system == "Windows"]</span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">imagecodecs>=2018.11.8</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">[:python_version == "2.7"]</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">pathlib</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">enum34</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">futures</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">numpy>=1.15.1</span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">imagecodecs>=2020.2.18</span>
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10
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"></span>
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">[all]</span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">matplotlib>=2.2</span>
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13
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext">imagecodecs>=2018.11.8</span></pre>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">matplotlib>=3.1</span></pre>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#85d98a4428185089b7087f93f8f67c463c7f97eb"><strong>tifffile/__init__.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tifffile/__init__.py</span></span>
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">__doc__</span><span class="p">,</span> <span class="n" style="color: #333;">__all__</span><span class="p">,</span> <span class="n" style="color: #333;">__version__</span><span class="p">,</span> <span class="n" style="color: #333;">main</span></span>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#2cdc4fd751aed69f9e2d0745721613fe9d1716f4"><strong>tifffile/__main__.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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2
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tifffile/__main__.py</span></span>
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3
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="python"><span class="s" style="color: #d14;">"""Tifffile package command line script."""</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="python"></span>
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4
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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5
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"></span>
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6
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">main</span></span>
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<li id="bc202f398b0197034f21f80808f47ee2a6dcf459">
<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#bc202f398b0197034f21f80808f47ee2a6dcf459"><strong>tifffile/lsm2bin.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#<span class="idiff left right"> -*- coding: utf-8 -*-</span></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#<span class="idiff left right">!/usr/bin/env python3</span></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># lsm2bin.py</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;">"""Convert <span class="idiff left right">*</span>TZCYX LSM file to series of BIN files.</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;">"""Convert TZCYX LSM file to series of BIN files.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"><span class="s" style="color: #d14;">Usage: lsm2bin lsm_filename [bin_filename]</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="s" style="color: #d14;">"""</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">__future__</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">division</span><span class="p">,</span> <span class="n" style="color: #333;">print_function</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">lsm2bin</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">lsm2bin</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"> <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">lsm2bin</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="python"> <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"> <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">lsm2bin</span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">main</span><span class="p">(</span><span class="n" style="color: #333;">argv</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#0897a6ad59d4e84cc745635b88c27baf0a78bd92"><strong>tifffile/tifffile.py</strong></a>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#3acaf79eb91797daaf3cb983175bf48362192cf0"><strong>tifffile/tifffile_geodb.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tifffile_geodb.py</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># GeoTIFF GeoKey Database</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Adapted from http://gis.ess.washington.edu/data/raster/drg/docs/geotiff.txt</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="python"><span class="s" style="color: #d14;">"""GeoTIFF GeoKey Database.</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="python"><span class="s" style="color: #d14;">Adapted from http://gis.ess.washington.edu/data/raster/drg/docs/geotiff.txt</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="python"><span class="s" style="color: #d14;"></span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="python"><span class="s" style="color: #d14;">"""</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">enum</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Proj</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"> <span class="s" style="color: #d14;">"""Projection Codes."""</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"> <span class="n" style="color: #333;">Alabama_CS27_East</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">10101</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="440" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -440,6 +443,7 @@ class Proj(enum.IntEnum):</td>
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<pre style="margin: 0;"> <span id="LC443" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC444" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">PCS</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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442
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445
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<pre style="margin: 0;"> <span id="LC445" class="line" lang="python"> <span class="s" style="color: #d14;">"""Projected CS Type Codes."""</span></span>
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446
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<pre style="margin: 0;">+<span id="LC446" class="line" lang="python"></span>
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443
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447
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<pre style="margin: 0;"> <span id="LC447" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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444
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448
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<pre style="margin: 0;"> <span id="LC448" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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445
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449
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<pre style="margin: 0;"> <span id="LC449" class="line" lang="python"> <span class="n" style="color: #333;">Adindan_UTM_zone_37N</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">20137</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1443" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1447" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1443,6 +1447,7 @@ class PCS(enum.IntEnum):</td>
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1443
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1447
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<pre style="margin: 0;"> <span id="LC1447" class="line" lang="python"></span>
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1444
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1448
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<pre style="margin: 0;"> <span id="LC1448" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">GCSE</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1445
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1449
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<pre style="margin: 0;"> <span id="LC1449" class="line" lang="python"> <span class="s" style="color: #d14;">"""Unspecified GCS based on ellipsoid."""</span></span>
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1450
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<pre style="margin: 0;">+<span id="LC1450" class="line" lang="python"></span>
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1446
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1451
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<pre style="margin: 0;"> <span id="LC1451" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1447
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1452
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<pre style="margin: 0;"> <span id="LC1452" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1448
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1453
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<pre style="margin: 0;"> <span id="LC1453" class="line" lang="python"> <span class="n" style="color: #333;">Airy1830</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">4001</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1484" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1489" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1484,6 +1489,7 @@ class GCSE(enum.IntEnum):</td>
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1484
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1489
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<pre style="margin: 0;"> <span id="LC1489" class="line" lang="python"></span>
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1485
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1490
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<pre style="margin: 0;"> <span id="LC1490" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">GCS</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1486
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1491
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<pre style="margin: 0;"> <span id="LC1491" class="line" lang="python"> <span class="s" style="color: #d14;">"""Geographic CS Type Codes."""</span></span>
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1492
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<pre style="margin: 0;">+<span id="LC1492" class="line" lang="python"></span>
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1487
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1493
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<pre style="margin: 0;"> <span id="LC1493" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1488
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1494
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<pre style="margin: 0;"> <span id="LC1494" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1489
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1495
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<pre style="margin: 0;"> <span id="LC1495" class="line" lang="python"> <span class="n" style="color: #333;">Adindan</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">4201</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1631" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1637" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1631,6 +1637,7 @@ class GCS(enum.IntEnum):</td>
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1631
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1637
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<pre style="margin: 0;"> <span id="LC1637" class="line" lang="python"></span>
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1632
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<td class="diff-line-num new_line" data-linenumber="1638" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1638
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<pre style="margin: 0;"> <span id="LC1638" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Ellipse</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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<td class="diff-line-num old_line" data-linenumber="1633" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1633
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<td class="diff-line-num new_line" data-linenumber="1639" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1639
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<pre style="margin: 0;"> <span id="LC1639" class="line" lang="python"> <span class="s" style="color: #d14;">"""Ellipsoid Codes."""</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1634" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1640" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1640
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<pre style="margin: 0;">+<span id="LC1640" class="line" lang="python"></span>
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<td class="diff-line-num old_line" data-linenumber="1634" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1634
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<td class="diff-line-num new_line" data-linenumber="1641" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1641
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<pre style="margin: 0;"> <span id="LC1641" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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<td class="diff-line-num old_line" data-linenumber="1635" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1635
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<td class="diff-line-num new_line" data-linenumber="1642" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1642
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<pre style="margin: 0;"> <span id="LC1642" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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<td class="diff-line-num old_line" data-linenumber="1636" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1636
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<td class="diff-line-num new_line" data-linenumber="1643" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1643
</td>
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<pre style="margin: 0;"> <span id="LC1643" class="line" lang="python"> <span class="n" style="color: #333;">Airy_1830</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">7001</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1672" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1679" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1672,6 +1679,7 @@ class Ellipse(enum.IntEnum):</td>
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<td class="diff-line-num old_line" data-linenumber="1672" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1672
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<td class="diff-line-num new_line" data-linenumber="1679" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1679
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<pre style="margin: 0;"> <span id="LC1679" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1673" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1673
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<td class="diff-line-num new_line" data-linenumber="1680" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1680
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<pre style="margin: 0;"> <span id="LC1680" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">DatumE</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1674" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1674
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<td class="diff-line-num new_line" data-linenumber="1681" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1681
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<pre style="margin: 0;"> <span id="LC1681" class="line" lang="python"> <span class="s" style="color: #d14;">"""Ellipsoid-Only Geodetic Datum Codes."""</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1675" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1682" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1682
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<pre style="margin: 0;">+<span id="LC1682" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1675" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1675
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<td class="diff-line-num new_line" data-linenumber="1683" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1683
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<pre style="margin: 0;"> <span id="LC1683" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1676" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1676
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<td class="diff-line-num new_line" data-linenumber="1684" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1684
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<pre style="margin: 0;"> <span id="LC1684" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1677" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1677
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<td class="diff-line-num new_line" data-linenumber="1685" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1685
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<pre style="margin: 0;"> <span id="LC1685" class="line" lang="python"> <span class="n" style="color: #333;">Airy1830</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">6001</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1713" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1721" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1713,6 +1721,7 @@ class DatumE(enum.IntEnum):</td>
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<td class="diff-line-num old_line" data-linenumber="1713" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1713
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<td class="diff-line-num new_line" data-linenumber="1721" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1721
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<pre style="margin: 0;"> <span id="LC1721" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1714" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1714
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<td class="diff-line-num new_line" data-linenumber="1722" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1722
</td>
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<pre style="margin: 0;"> <span id="LC1722" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Datum</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1715" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1715
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<td class="diff-line-num new_line" data-linenumber="1723" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1723
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<pre style="margin: 0;"> <span id="LC1723" class="line" lang="python"> <span class="s" style="color: #d14;">"""Geodetic Datum Codes."""</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1716" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="1724" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1724
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<pre style="margin: 0;">+<span id="LC1724" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1716" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1716
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<td class="diff-line-num new_line" data-linenumber="1725" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1725
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<pre style="margin: 0;"> <span id="LC1725" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1717" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1717
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<td class="diff-line-num new_line" data-linenumber="1726" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1726
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<pre style="margin: 0;"> <span id="LC1726" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="1718" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1718
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<td class="diff-line-num new_line" data-linenumber="1727" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1727
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<pre style="margin: 0;"> <span id="LC1727" class="line" lang="python"> <span class="n" style="color: #333;">Adindan</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">6201</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1840" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1849" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1840,6 +1849,7 @@ class Datum(enum.IntEnum):</td>
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1840
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1849
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<pre style="margin: 0;"> <span id="LC1849" class="line" lang="python"></span>
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<td class="diff-line-num old_line" data-linenumber="1841" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1841
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<td class="diff-line-num new_line" data-linenumber="1850" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1850
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<pre style="margin: 0;"> <span id="LC1850" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">ModelType</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1842
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1851
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<pre style="margin: 0;"> <span id="LC1851" class="line" lang="python"> <span class="s" style="color: #d14;">"""Model Type Codes."""</span></span>
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1852
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<pre style="margin: 0;">+<span id="LC1852" class="line" lang="python"></span>
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1843
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1853
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<pre style="margin: 0;"> <span id="LC1853" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1844
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1854
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<pre style="margin: 0;"> <span id="LC1854" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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<td class="diff-line-num old_line" data-linenumber="1845" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1845
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1855
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<pre style="margin: 0;"> <span id="LC1855" class="line" lang="python"> <span class="n" style="color: #333;">Projected</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1849" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1859" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1849,6 +1859,7 @@ class ModelType(enum.IntEnum):</td>
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1849
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1859
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<pre style="margin: 0;"> <span id="LC1859" class="line" lang="python"></span>
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1850
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1860
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<pre style="margin: 0;"> <span id="LC1860" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">RasterPixel</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1851
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1861
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<pre style="margin: 0;"> <span id="LC1861" class="line" lang="python"> <span class="s" style="color: #d14;">"""Raster Type Codes."""</span></span>
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1862
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<pre style="margin: 0;">+<span id="LC1862" class="line" lang="python"></span>
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1852
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1863
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<pre style="margin: 0;"> <span id="LC1863" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1853
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1864
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<pre style="margin: 0;"> <span id="LC1864" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1854
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1865
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<pre style="margin: 0;"> <span id="LC1865" class="line" lang="python"> <span class="n" style="color: #333;">IsArea</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1857" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1868" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1857,6 +1868,7 @@ class RasterPixel(enum.IntEnum):</td>
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1857
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1868
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<pre style="margin: 0;"> <span id="LC1868" class="line" lang="python"></span>
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1858
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1869
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<pre style="margin: 0;"> <span id="LC1869" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Linear</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1859
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1870
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<pre style="margin: 0;"> <span id="LC1870" class="line" lang="python"> <span class="s" style="color: #d14;">"""Linear Units."""</span></span>
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1871
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<pre style="margin: 0;">+<span id="LC1871" class="line" lang="python"></span>
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1860
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1872
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<pre style="margin: 0;"> <span id="LC1872" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1861
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1873
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<pre style="margin: 0;"> <span id="LC1873" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1862
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1874
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<pre style="margin: 0;"> <span id="LC1874" class="line" lang="python"> <span class="n" style="color: #333;">Meter</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">9001</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1878" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1890" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1878,6 +1890,7 @@ class Linear(enum.IntEnum):</td>
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1878
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1890
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<pre style="margin: 0;"> <span id="LC1890" class="line" lang="python"></span>
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1879
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1891
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<pre style="margin: 0;"> <span id="LC1891" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Angular</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1880
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1892
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<pre style="margin: 0;"> <span id="LC1892" class="line" lang="python"> <span class="s" style="color: #d14;">"""Angular Units."""</span></span>
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1893
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<pre style="margin: 0;">+<span id="LC1893" class="line" lang="python"></span>
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1881
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1894
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<pre style="margin: 0;"> <span id="LC1894" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1882
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1895
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<pre style="margin: 0;"> <span id="LC1895" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1883
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1896
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<pre style="margin: 0;"> <span id="LC1896" class="line" lang="python"> <span class="n" style="color: #333;">Radian</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">9101</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1892" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1905" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1892,6 +1905,7 @@ class Angular(enum.IntEnum):</td>
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1892
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1905
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<pre style="margin: 0;"> <span id="LC1905" class="line" lang="python"></span>
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1893
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1906
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<pre style="margin: 0;"> <span id="LC1906" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">PM</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1894
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1907
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<pre style="margin: 0;"> <span id="LC1907" class="line" lang="python"> <span class="s" style="color: #d14;">"""Prime Meridian Codes."""</span></span>
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1908
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<pre style="margin: 0;">+<span id="LC1908" class="line" lang="python"></span>
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1895
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1909
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<pre style="margin: 0;"> <span id="LC1909" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1896
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1910
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<pre style="margin: 0;"> <span id="LC1910" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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<td class="diff-line-num old_line" data-linenumber="1897" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1897
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1911
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<pre style="margin: 0;"> <span id="LC1911" class="line" lang="python"> <span class="n" style="color: #333;">Greenwich</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">8901</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1909" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1923" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1909,6 +1923,7 @@ class PM(enum.IntEnum):</td>
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1909
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1923
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<pre style="margin: 0;"> <span id="LC1923" class="line" lang="python"></span>
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1910
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1924
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<pre style="margin: 0;"> <span id="LC1924" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">CT</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1911
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1925
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<pre style="margin: 0;"> <span id="LC1925" class="line" lang="python"> <span class="s" style="color: #d14;">"""Coordinate Transformation Codes."""</span></span>
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1926
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<pre style="margin: 0;">+<span id="LC1926" class="line" lang="python"></span>
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1912
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1927
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<pre style="margin: 0;"> <span id="LC1927" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1913
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1928
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<pre style="margin: 0;"> <span id="LC1928" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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1914
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1929
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<pre style="margin: 0;"> <span id="LC1929" class="line" lang="python"> <span class="n" style="color: #333;">TransverseMercator</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1944" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1959" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1944,6 +1959,7 @@ class CT(enum.IntEnum):</td>
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1944
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1959
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<pre style="margin: 0;"> <span id="LC1959" class="line" lang="python"></span>
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1945
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1960
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<pre style="margin: 0;"> <span id="LC1960" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">VertCS</span><span class="p">(</span><span class="n" style="color: #333;">enum</span><span class="p">.</span><span class="n" style="color: #333;">IntEnum</span><span class="p">):</span></span>
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1946
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1961
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<pre style="margin: 0;"> <span id="LC1961" class="line" lang="python"> <span class="s" style="color: #d14;">"""Vertical CS Type Codes."""</span></span>
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<td class="diff-line-num new old_line" data-linenumber="1947" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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1962
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<pre style="margin: 0;">+<span id="LC1962" class="line" lang="python"></span>
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1947
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1963
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<pre style="margin: 0;"> <span id="LC1963" class="line" lang="python"> <span class="n" style="color: #333;">Undefined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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1948
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<td class="diff-line-num new_line" data-linenumber="1964" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1964
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<pre style="margin: 0;"> <span id="LC1964" class="line" lang="python"> <span class="n" style="color: #333;">User_Defined</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">32767</span></span>
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<td class="diff-line-num old_line" data-linenumber="1949" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1949
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<td class="diff-line-num new_line" data-linenumber="1965" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
1965
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<pre style="margin: 0;"> <span id="LC1965" class="line" lang="python"> <span class="n" style="color: #333;">Airy_1830_ellipsoid</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">5001</span></span>
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<a href="https://salsa.debian.org/python-team/modules/tifffile/-/commit/cddd23a49bc80e966691ecfd49a33ed1d72b4a1e#2a8227a96cefa9bb7fb9ecf3547861080d92376d"><strong>tiffile.py</strong>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># tiffile.py</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="python"></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;">"""Proxy module for the tifffile package."""</span></span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="python"></span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">__doc__</span><span class="p">,</span> <span class="n" style="color: #333;">__all__</span><span class="p">,</span> <span class="n" style="color: #333;">__version__</span> <span class="c1" style="color: #998; font-style: italic;"># noqa</span></span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">lsm2bin</span><span class="p">,</span> <span class="n" style="color: #333;">main</span> <span class="c1" style="color: #998; font-style: italic;"># noqa</span></span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">tifffile.tifffile</span> <span class="kn" style="font-weight: 600;">import</span> <span class="o" style="font-weight: 600;">*</span> <span class="c1" style="color: #998; font-style: italic;"># noqa</span></span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="python"></span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="python"><span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">__name__</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">'__main__'</span><span class="p">:</span></span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="python"> <span class="n" style="color: #333;">sys</span><span class="p">.</span><span class="nb" style="color: #0086b3;">exit</span><span class="p">(</span><span class="n" style="color: #333;">main</span><span class="p">())</span></span></pre>
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