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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/drop-seq">Debian Med / drop-seq</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/drop-seq/-/commit/580b408c902c19a44d5cfa46b3149765ff5a95aa">580b408c</a></strong>
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<span>by Andreas Tille</span>
<i>at 2020-05-21T14:38:24+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Install wrapper
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<h4>3 changed files:</h4>
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<a href="#ff3c68d698c7acfa96716fb3e9e14cea51063196">
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+
debian/bin/drop-seq
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#68d8c5c6babbf5cf109b2584c454449dbff75772">
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+
debian/install
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<h4>Changes:</h4>
<li id="ff3c68d698c7acfa96716fb3e9e14cea51063196">
<a href="https://salsa.debian.org/med-team/drop-seq/-/commit/580b408c902c19a44d5cfa46b3149765ff5a95aa#ff3c68d698c7acfa96716fb3e9e14cea51063196"><strong>debian/bin/drop-seq</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;">#! /bin/sh</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="shell"><span class="nb" style="color: #0086b3;">set</span> <span class="nt" style="color: #000080;">-e</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;"># export JAVA_HOME=/usr/lib/jvm/default-java</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="shell"><span class="nb" style="color: #0086b3;">export </span><span class="nv" style="color: #008080;">JAVA_CMD</span><span class="o" style="font-weight: 600;">=</span>java</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;"># Include the wrappers utility script</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="shell"><span class="nb" style="color: #0086b3;">.</span> /usr/lib/java-wrappers/java-wrappers.sh</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="shell">run_java <span class="nt" style="color: #000080;">-Xms128M</span> <span class="nt" style="color: #000080;">-Xmx16384m</span> <span class="nt" style="color: #000080;">-jar</span> /usr/share/java/dropseq.jar <span class="s2" style="color: #d14;">"</span><span class="nv" style="color: #008080;">$@</span><span class="s2" style="color: #d14;">"</span></span></pre>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/drop-seq/-/commit/580b408c902c19a44d5cfa46b3149765ff5a95aa#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -25,6 +25,8 @@ Package: drop-seq-tools</td>
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25
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">Architecture: any</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext">Depends: ${java:Depends},</span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> ${misc:Depends},</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> default-jre | java-runtime,</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> java-wrappers,</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> picard-tools,</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> libpicard-java,</span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> libcommons-collections4-java,</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">debian/bin usr</span></pre>
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