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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/vg">Debian Med / vg</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/vg/-/commit/3cbd8f5d6b08092bea1ee1b10ec53459343cbb9d">3cbd8f5d</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-05-23T13:56:13+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/vg/-/commit/37e7de41a672784838ab7443cde6a32f91355d23">37e7de41</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-05-23T13:56:16+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.24.0+ds</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/vg/-/commit/d0f2b7b4c6cf3560541fecebb7a444bf9e7d85cd">d0f2b7b4</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-05-23T14:00:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.24.0+ds'
Update to upstream version '1.24.0+ds'
with Debian dir 7b4bf89271563217739fec18557bf3fa4cdf514d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/vg/-/commit/9844728c42cbf7a123c2f9ba5c2929fbaaa49686">9844728c</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-05-23T14:37:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refreshed patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/vg/-/commit/09366f2a3190b3a004bbcc70e9e7a32816cb4f0e">09366f2a</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-05-23T19:39:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">release 1.24.0+ds-1 to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4">
Dockerfile
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<li class="file-stats">
<a href="#3fa7b3d8e9b1a6a923cff77497ab817d9f94b6c0">
Doxyfile
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</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#c99edf3687f92ddaeb98b563e4f5489c663bf73c">
debian/patches/crossbuild
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<li class="file-stats">
<a href="#4c0e18367b4a4c2fb5a4fb13dd30c8d2df5876b2">
debian/patches/simde
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<li class="file-stats">
<a href="#e4c19aed51618bf0c7ebd03189c67e422f84d4eb">
debian/patches/spelling
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<li class="file-stats">
<a href="#e0e0df1ee82b8fee55ec3f2bc46c840de2511e4d">
debian/patches/use_packaged_fastahack
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<li class="file-stats">
<a href="#93ffdd9ebb2b016e477974ef124c3a21a0f2c291">
debian/patches/use_packaged_smithwaterman
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<li class="file-stats">
<a href="#554ebbe0231e010522e5cb739f1522e0376881bc">
debian/patches/use_packaged_vcflib
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<li class="file-stats">
<a href="#ba8314604e549019ad8840312032f20d39a7d538">
deps/dozeu/dozeu.h
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<li class="file-stats">
<a href="#8e95938668f907740e6efe9d2e5922ccac0b7be6">
deps/gbwt/README.md
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<li class="file-stats">
<a href="#063742889805975a4b2824be57aef902e7c95c8e">
deps/gbwt/cached_gbwt.cpp
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<li class="file-stats">
<a href="#f81aa0821057d54894a1771d433e49e2cbeabd0c">
deps/gbwtgraph/.gitignore
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<li class="file-stats">
<a href="#e450b88b477c82152315780527d791dc74f0a4eb">
deps/gbwtgraph/CMakeLists.txt
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<li class="file-stats">
<a href="#4b43c80e85bb33f0a5d3336f25ab15b5362dde88">
deps/gbwtgraph/Makefile
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<li class="file-stats">
<a href="#339c3b2f48a7dec913d4216849041699bd51f224">
<span class="new-file">
+
deps/gbwtgraph/algorithms.cpp
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</a>
</li>
<li class="file-stats">
<a href="#2b11dfcef1f8b54c335c551b5f579a5b4138731b">
<span class="new-file">
+
deps/gbwtgraph/cached_gbwtgraph.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#8fe02eaa22937b5e0a3dbd75fd9b2a55cc6245f4">
deps/gbwtgraph/gbwtgraph.cpp
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</li>
<li class="file-stats">
<a href="#8dbc801267d0309458b9fbf5d4e18a99dfd13008">
<span class="new-file">
+
deps/gbwtgraph/include/gbwtgraph/algorithms.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#3649fb0501364c121ae279c64564ef2eda1abd91">
<span class="new-file">
+
deps/gbwtgraph/include/gbwtgraph/cached_gbwtgraph.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#bd939dfb7044f27ba951aeb8601243f9b5d318a6">
deps/gbwtgraph/include/gbwtgraph/gbwtgraph.h
</a>
</li>
<li class="file-stats">
<a href="#73505742c617d11b972ab80f8b52ea985b05597d">
deps/gbwtgraph/include/gbwtgraph/index.h
</a>
</li>
<li class="file-stats">
<a href="#09a8f7b73d8803d202aade4f124171e9551e5380">
deps/gbwtgraph/include/gbwtgraph/io.h
</a>
</li>
<li class="file-stats">
<a href="#595b7a95b1d697e9cf946a498006e3c19b82881f">
deps/gbwtgraph/include/gbwtgraph/minimizer.h
</a>
</li>
<li class="file-stats">
<a href="#2b2860c06141099fda2c2569386734e20d9652ae">
deps/gbwtgraph/include/gbwtgraph/path_cover.h
</a>
</li>
<li class="file-stats">
<a href="#eb1e2a6a46dc11da01d07903ba4950e0aac65b9d">
deps/gbwtgraph/include/gbwtgraph/utils.h
</a>
</li>
<li class="file-stats">
<a href="#b1c2674c8104ecd460c11bdb3f995d5b38de8401">
deps/gbwtgraph/minimizer.cpp
</a>
</li>
<li class="file-stats">
<a href="#4455db1681a249fd8a4b6e5a18d7b9e046edcdcc">
deps/gbwtgraph/path_cover.cpp
</a>
</li>
<li class="file-stats">
<a href="#78d18e68cc7a6332fa3777e989aecda363c31794">
deps/gbwtgraph/tests/Makefile
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</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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—
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