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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/examl">Debian Med / examl</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/21a711299fbf00140037497976540045af72a0b9">21a71129</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T15:47:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/60a1085616ce711626bc93b4f88ebfcce981a05d">60a10856</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T15:47:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 3.0.22</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/207a7fd069f51db312c777f78c45ff176960e08e">207a7fd0</a></strong>
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<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T15:48:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/3.0.22'
Update to upstream version '3.0.22'
with Debian dir c792c49595fd2191b9c1712d26f5a731d844786b</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/998cc4d6f8d0fcf5abeb30f3ecd8d6b2e08d9a4b">998cc4d6</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T16:00:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh hardening patch, almost all of it was applied upstream.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/93bb2fa00db5d10d85eddfca1089e2a2e365e3b9">93bb2fa0</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T16:08:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix SIMDe Built-Using
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/examl/-/commit/bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4">bd8acb65</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-06-01T16:10:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">release 3.0.22-1 to unstable
</pre>
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</ul>
<h4>8 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#4d4a394ff4174f20019a8af4d8b6185efe92c21f">
debian/patches/hardening.patch
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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</li>
<li class="file-stats">
<a href="#93bfef1f94dd8bca20fda92223642f6f20da1ae2">
examl/Makefile.AVX.gcc
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<li class="file-stats">
<a href="#3b74974673efcc63cd6dd44426112b37700035d4">
examl/Makefile.OMP.AVX.gcc
</a>
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<li class="file-stats">
<a href="#ad770ed19fafa9e0edc222b9389d65f9bd643afa">
examl/Makefile.OMP.SSE3.gcc
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<li class="file-stats">
<a href="#87d7b8718b6491a1bc94cec33653664abeb46a3a">
examl/Makefile.SSE3.gcc
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<li class="file-stats">
<a href="#f613dd0083cd06f090ef45b6eb7946d760b2dfcb">
versionHeader/version.h
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</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">examl (3.0.2<span class="idiff left right">1-5) UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">examl (3.0.2<span class="idiff left right">2-1) unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * New upstream release.</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * For GPL compliance, document libsimde-dev usage and version number via</span>
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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> Built-Using</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Refresh hardening patch, almost all of it was applied upstream.</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> -- Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com> Sun, 19 Apr 2020 14:23:38</span> +0200</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> -- Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org> Mon, 01 Jun 2020 16:09:49</span> +0200</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">examl (3.0.21-4) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<li id="4d4a394ff4174f20019a8af4d8b6185efe92c21f">
<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#4d4a394ff4174f20019a8af4d8b6185efe92c21f"><strong>debian/patches/hardening.patch</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,94 +3,6 @@ Last-Update: Tue, 14 Feb 2017 17:37:55 +0100</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Subject: Enable propagation of hardening options</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="p">Forwarded: https://github.com/stamatak/ExaML/pull/15</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff">--- examl.orig/examl/Makefile.AVX.gcc</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ examl/examl/Makefile.AVX.gcc</span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="p">@@ -8,7 +8,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"> OPT_FLAG_1 = -O1</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"> OPT_FLAG_2 = -O2</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS = $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS += $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="diff"> LIBRARIES = -lm -mavx</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="diff"><span class="p">@@ -21,13 +21,13 @@</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="diff"> GLOBAL_DEPS = axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="diff"> examl-AVX : $(objs)</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) -o examl-AVX $(objs) $(LIBRARIES) </span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) -o examl-AVX $(objs) $(LIBRARIES) $(LDFLAGS)</span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="diff"> avxLikelihood.o : avxLikelihood.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) $(CFLAGS) -mavx -c -o avxLikelihood.o avxLikelihood.c</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) $(CFLAGS) $(CPPFLAGS) -mavx -c -o avxLikelihood.o avxLikelihood.c</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="diff"> models.o : models.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) $(COMMON_FLAGS) $(OPT_FLAG_1) -c -o models.o models.c</span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) $(CFLAGS) $(COMMON_FLAGS) $(OPT_FLAG_1) $(CPPFLAGS) -c -o models.o models.c</span></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="diff"> bipartitionList.o : bipartitionList.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="diff"> evaluatePartialSpecialGeneric.o : evaluatePartialSpecialGeneric.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- examl.orig/examl/Makefile.OMP.AVX.gcc</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ examl/examl/Makefile.OMP.AVX.gcc</span></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="diff"><span class="p">@@ -8,7 +8,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="diff"> OPT_FLAG_1 = -O1</span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="diff"> OPT_FLAG_2 = -O2</span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS = $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS += $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="diff"> LIBRARIES = -lm -mavx -fopenmp</span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="diff"><span class="p">@@ -21,7 +21,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="diff"> GLOBAL_DEPS = axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="diff"> examl-OMP-AVX : $(objs)</span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) -o examl-OMP-AVX $(objs) $(LIBRARIES) </span></span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) -o examl-OMP-AVX $(objs) $(LIBRARIES) $(LDFLAGS)</span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="diff"> avxLikelihood.o : avxLikelihood.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="diff"> $(CC) $(CFLAGS) -mavx -c -o avxLikelihood.o avxLikelihood.c</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- examl.orig/examl/Makefile.OMP.SSE3.gcc</span></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ examl/examl/Makefile.OMP.SSE3.gcc</span></span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="diff"><span class="p">@@ -8,7 +8,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="diff"> OPT_FLAG_1 = -O1 </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="diff"> OPT_FLAG_2 = -O2</span>
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59
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS = $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS += $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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62
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="diff"> </span>
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63
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="diff"> LIBRARIES = -lm -fopenmp</span>
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64
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="diff"> </span>
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65
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="diff"><span class="p">@@ -21,7 +21,7 @@</span></span>
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66
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="diff"> GLOBAL_DEPS = axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="diff"> </span>
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68
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="diff"> examl-OMP : $(objs)</span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) -o examl-OMP $(objs) $(LIBRARIES) </span></span>
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) -o examl-OMP $(objs) $(LIBRARIES) $(LDFLAGS)</span></span>
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="diff"> models.o : models.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="diff"> $(CC) $(COMMON_FLAGS) $(OPT_FLAG_1) -c -o models.o models.c</span>
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74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- examl.orig/examl/Makefile.SSE3.gcc</span></span>
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75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ examl/examl/Makefile.SSE3.gcc</span></span>
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76
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="diff"><span class="p">@@ -9,7 +9,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="diff"> OPT_FLAG_1 = -O1 </span>
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78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="diff"> OPT_FLAG_2 = -O2</span>
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79
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="diff"> </span>
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80
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS = $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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81
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS += $(COMMON_FLAGS) $(OPT_FLAG_2)</span></span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="diff"> </span>
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83
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="diff"> LIBRARIES = -lm</span>
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="diff"><span class="p">@@ -22,7 +22,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="diff"> GLOBAL_DEPS = axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="diff"> examl : $(objs)</span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) -o examl $(objs) $(LIBRARIES) </span></span>
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CC) -o examl $(objs) $(LIBRARIES) $(LDFLAGS)</span></span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="diff"> models.o : models.c $(GLOBAL_DEPS)</span>
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="diff"> $(CC) $(COMMON_FLAGS) $(OPT_FLAG_1) -c -o models.o models.c</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff">--- examl.orig/parser/Makefile.SSE3.gcc</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ examl/parser/Makefile.SSE3.gcc</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"><span class="p">@@ -2,7 +2,7 @@</span></span>
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<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -80,4 +80,4 @@ else</td>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext">endif</span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext">override_dh_gencontrol:</span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> dh_gencontrol -- -Vsimde:Built-Using=<span class="idiff left right">$(shell dpkg-query -f '$${source:Package} (= $${source:Version}), ' -W "libsimde-dev")</span></span></pre>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> dh_gencontrol -- -Vsimde:Built-Using=<span class="idiff left right">"$(shell dpkg-query -f '$${source:Package} (= $${source:Version}), ' -W "libsimde-dev")"</span></span></pre>
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<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#93bfef1f94dd8bca20fda92223642f6f20da1ae2"><strong>examl/Makefile.AVX.gcc</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,7 @@ COMMON_FLAGS = -D__SIM_SSE3 -D__AVX -D_OPTIMIZED_FUNCTIONS -msse3 -D_GNU_SOURCE</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_1</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O1</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_2</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O2</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="make"></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;">=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;"><span class="idiff left right">+</span>=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="make"><span class="nv" style="color: #008080;">LIBRARIES</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-lm</span> <span class="nt" style="color: #000080;">-mavx</span></span>
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="make"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,13 +21,13 @@ all : clean examl-AVX</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="make"><span class="nv" style="color: #008080;">GLOBAL_DEPS</span> <span class="o" style="font-weight: 600;">=</span> axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="make"><span class="nl">examl-AVX </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">$(objs)</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-AVX <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> </span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-AVX <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> <span class="nv" style="color: #008080;"><span class="idiff left right">$(LDFLAGS)</span></span></span>
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25
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="make"><span class="nl">avxLikelihood.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">avxLikelihood.c $(GLOBAL_DEPS)</span></span>
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27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nv" style="color: #008080;">$(CFLAGS)</span> <span class="nt" style="color: #000080;">-mavx</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> avxLikelihood.o avxLikelihood.c</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nv" style="color: #008080;">$(CFLAGS)</span> <span class="nv" style="color: #008080;"><span class="idiff left">$(CPPFLAGS)</span></span><span class="idiff right"> </span><span class="nt" style="color: #000080;">-mavx</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> avxLikelihood.o avxLikelihood.c</span>
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28
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="make"><span class="nl">models.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">models.c $(GLOBAL_DEPS)</span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="make"> <span class="idiff left"> </span><span class="nv" style="color: #008080;"><span class="idiff">$(CC)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">$(COMMON_FLAGS)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff right">$(OPT_FLAG_1</span>)</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> models.o models.c</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="make"> <span class="nv" style="color: #008080;"><span class="idiff left">$(CC)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">$(CFLAGS)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">$(COMMON_FLAGS)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">$(OPT_FLAG_1)</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff right">$(CPPFLAGS</span>)</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> models.o models.c</span>
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31
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="make"></span>
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32
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="make"><span class="nl">bipartitionList.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">bipartitionList.c $(GLOBAL_DEPS)</span></span>
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33
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="make"><span class="nl">evaluatePartialSpecialGeneric.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">evaluatePartialSpecialGeneric.c $(GLOBAL_DEPS)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,7 @@ COMMON_FLAGS = -D__SIM_SSE3 -D__AVX -D_USE_OMP -fopenmp -D_OPTIMIZED_FUNCTIONS -</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_1</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O1</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_2</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O2</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="make"></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;">=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;"><span class="idiff left right">+</span>=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="make"><span class="nv" style="color: #008080;">LIBRARIES</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-lm</span> <span class="nt" style="color: #000080;">-mavx</span> <span class="nt" style="color: #000080;">-fopenmp</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="make"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,7 +21,7 @@ all : clean examl-OMP-AVX</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="make"><span class="nv" style="color: #008080;">GLOBAL_DEPS</span> <span class="o" style="font-weight: 600;">=</span> axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="make"><span class="nl">examl-OMP-AVX </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">$(objs)</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-OMP-AVX <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-OMP-AVX <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> <span class="nv" style="color: #008080;"><span class="idiff left right">$(LDFLAGS)</span></span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="make"><span class="nl">avxLikelihood.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">avxLikelihood.c $(GLOBAL_DEPS)</span></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nv" style="color: #008080;">$(CFLAGS)</span> <span class="nt" style="color: #000080;">-mavx</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> avxLikelihood.o avxLikelihood.c</span>
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<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#ad770ed19fafa9e0edc222b9389d65f9bd643afa"><strong>examl/Makefile.OMP.SSE3.gcc</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,7 @@ COMMON_FLAGS = -D_USE_OMP -fopenmp -D_GNU_SOURCE -D__SIM_SSE3 -msse3 -fomit-fra</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_1</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O1</span> </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_2</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O2</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="make"></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;">=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;"><span class="idiff left right">+</span>=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="make"><span class="nv" style="color: #008080;">LIBRARIES</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-lm</span> <span class="nt" style="color: #000080;">-fopenmp</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="make"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,7 +21,7 @@ all : clean examl-OMP</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="make"><span class="nv" style="color: #008080;">GLOBAL_DEPS</span> <span class="o" style="font-weight: 600;">=</span> axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="make"><span class="nl">examl-OMP </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">$(objs)</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-OMP <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl-OMP <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> <span class="nv" style="color: #008080;"><span class="idiff left right">$(LDFLAGS)</span></span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="make"><span class="nl">models.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">models.c $(GLOBAL_DEPS)</span></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_1)</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> models.o models.c</span>
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<li id="87d7b8718b6491a1bc94cec33653664abeb46a3a">
<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#87d7b8718b6491a1bc94cec33653664abeb46a3a"><strong>examl/Makefile.SSE3.gcc</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,7 @@ COMMON_FLAGS = -D_GNU_SOURCE -D__SIM_SSE3 -msse3 -fomit-frame-pointer -funroll-</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_1</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O1</span> </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="make"><span class="nv" style="color: #008080;">OPT_FLAG_2</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-O2</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="make"></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;">=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="make"><span class="nv" style="color: #008080;">CFLAGS</span> <span class="o" style="font-weight: 600;"><span class="idiff left right">+</span>=</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_2)</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="make"><span class="nv" style="color: #008080;">LIBRARIES</span> <span class="o" style="font-weight: 600;">=</span> <span class="nt" style="color: #000080;">-lm</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="make"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -22,7 +22,7 @@ all : clean examl</td>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="make"><span class="nv" style="color: #008080;">GLOBAL_DEPS</span> <span class="o" style="font-weight: 600;">=</span> axml.h globalVariables.h ../versionHeader/version.h</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="make"><span class="nl">examl </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">$(objs)</span></span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nt" style="color: #000080;">-o</span> examl <span class="nv" style="color: #008080;">$(objs)</span> <span class="nv" style="color: #008080;">$(LIBRARIES)</span> <span class="nv" style="color: #008080;"><span class="idiff left right">$(LDFLAGS)</span></span></span>
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26
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26
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="make"></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="make"><span class="nl">models.o </span><span class="o" style="font-weight: 600;">:</span> <span class="nf" style="color: #900; font-weight: 600;">models.c $(GLOBAL_DEPS)</span></span>
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28
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="make"> <span class="nv" style="color: #008080;">$(CC)</span> <span class="nv" style="color: #008080;">$(COMMON_FLAGS)</span> <span class="nv" style="color: #008080;">$(OPT_FLAG_1)</span> <span class="nt" style="color: #000080;">-c</span> <span class="nt" style="color: #000080;">-o</span> models.o models.c</span>
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<a href="https://salsa.debian.org/med-team/examl/-/compare/051767c7890394416cb66604a7bff2d8b1b0e396...bd8acb65b1fb2c7bb8e2292e0ef00f0108718cf4#f613dd0083cd06f090ef45b6eb7946d760b2dfcb"><strong>versionHeader/version.h</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programName "ExaML"</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programVersion "3.0.2<span class="idiff left right">1</span>"</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programVersionInt 302<span class="idiff left right">1</span></span></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programDate "<span class="idiff left right">May 29 2018</span>"</span></span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programVersion "3.0.2<span class="idiff left right">2</span>"</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programVersionInt 302<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define programDate "<span class="idiff left right">April 21 2020</span>"</span></span></pre>
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