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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/pll-modules">Debian Med / pll-modules</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/pll-modules/-/commit/f9ac2e179eff34526be79088140f3ce656553021">f9ac2e17</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-04T22:05:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Install static and shared libs
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pll-modules/-/commit/1053d9e420dba57e97634c0e89fd5c3d4f633c96">1053d9e4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-04T22:37:32+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not install *.la files
</pre>
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<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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</li>
<li class="file-stats">
<a href="#c9833245f06cebf462f3506e552fea8078c78cd2">
<span class="new-file">
+
debian/libpll-modules-dev.examples
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<li class="file-stats">
<a href="#7d3bfb7d49225072f7a426a4462f94758e5157d6">
<span class="new-file">
+
debian/libpll-modules-dev.install
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<li class="file-stats">
<a href="#a0d1220c68c73c49be5f07b2a562ff2557815a90">
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+
debian/libpll-modules0.install
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<li class="file-stats">
<a href="#3849fa3def4dc8cbfede5d0ec743d97c90024540">
<span class="deleted-file">
−
debian/pll-modules.install
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<h4>Changes:</h4>
<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,6 +4,7 @@ Uploaders: Andreas Tille <tille@debian.org></td>
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<td class="diff-line-num old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Section: science</span>
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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Priority: optional</span>
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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> dh-exec,</span>
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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> libpll-dev,</span>
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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> zlib1g-dev,</span>
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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> bison,</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,16 +17,26 @@ Homepage: https://github.com/ddarriba/pll-modules</td>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Package: libpll-modules-dev</span>
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<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Architecture: any</span>
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<td class="diff-line-num old old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext">Depends: ${shlibs:Depends},</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext">Section: libdevel</span>
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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext">Depends: libpll-modules0 (= ${binary:Version}),</span>
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<td class="diff-line-num new new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> ${shlibs:Depends},</span>
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<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> ${misc:Depends}</span>
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<td class="diff-line-num new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Description: high level modules for the low level phylogenetic likelihood library</span>
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<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> This package provides high level modules for the low level phylogenetic</span>
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<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> likelihood library.</span>
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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line old" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext">Package: libpll-modules<span class="idiff left right">-examples</span></span>
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<td class="diff-line-num new new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext">Package: libpll-modules<span class="idiff left right">0</span></span>
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26
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29
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext">Architecture: any</span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext">Section: libs</span>
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27
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext">Depends: ${shlibs:Depends},</span>
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28
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> ${misc:Depends},</span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> ${misc:Depends}</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext">Description: high level modules for the low level phylogenetic likelihood library</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> This package provides high level modules for the low level phylogenetic</span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> likelihood library.</span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext">Package: libpll-modules-examples</span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext">Architecture: all</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext">Depends: ${misc:Depends},</span>
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29
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40
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> libpll0,</span>
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30
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41
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> libpll-modules-dev</span>
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31
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext">Description: example binaries for libpll-modules-dev</span>
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<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#c9833245f06cebf462f3506e552fea8078c78cd2"><strong>debian/libpll-modules-dev.examples</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">examples/*</span></pre>
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<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#7d3bfb7d49225072f7a426a4462f94758e5157d6"><strong>debian/libpll-modules-dev.install</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="c1" style="color: #998; font-style: italic;">#!/usr/bin/dh-exec</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="php"><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">a</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">$</span><span class="p">{</span><span class="nx">DEB_HOST_MULTIARCH</span><span class="p">}</span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="php"><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">so</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">$</span><span class="p">{</span><span class="nx">DEB_HOST_MULTIARCH</span><span class="p">}</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="php"><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="k" style="font-weight: 600;">include</span> <span class="nx">usr</span></span></pre>
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<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#a0d1220c68c73c49be5f07b2a562ff2557815a90"><strong>debian/libpll-modules0.install</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="c1" style="color: #998; font-style: italic;">#!/usr/bin/dh-exec</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="php"><span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/*.</span><span class="nx">so</span><span class="o" style="font-weight: 600;">.*</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">lib</span><span class="o" style="font-weight: 600;">/</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">$</span><span class="p">{</span><span class="nx">DEB_HOST_MULTIARCH</span><span class="p">}</span></span></pre>
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<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#3849fa3def4dc8cbfede5d0ec743d97c90024540"><strong>debian/pll-modules.install</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="php"><span class="nx">examples</span><span class="o" style="font-weight: 600;">/</span> <span class="nx">usr</span><span class="o" style="font-weight: 600;">/</span><span class="nx">share</span><span class="o" style="font-weight: 600;">/</span><span class="nx">doc</span><span class="o" style="font-weight: 600;">/</span><span class="nx">pll</span><span class="o" style="font-weight: 600;">-</span><span class="nx">modules</span><span class="o" style="font-weight: 600;">/</span></span></pre>
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<a href="https://salsa.debian.org/med-team/pll-modules/-/compare/2dc7b2262ff7b3a4d725104325e42ce44526a717...1053d9e420dba57e97634c0e89fd5c3d4f633c96#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -11,17 +11,11 @@ include /usr/share/dpkg/default.mk</td>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">INSTALLATION_PREFIX = "/usr"</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">%:</span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dh $@<span class="idiff left right"> --with autoreconf</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dh $@</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">override_dh_auto_configure:</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> ./configure --prefix $(INSTALLATION_PREFIX) CPPFLAGS="-I/usr/include/libpll" LDFLAGS="-L/usr/include/libpll"</span>
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<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext">override_dh_install:</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> dh_install</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> sed -i "/dependency_libs/ s/'.*'/''/" `find . -name '*.la'`</span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> d-shlibmove --commit \</span>
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<td class="diff-line-num old old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> --multiarch \</span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> --devunversioned \</span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> --exclude-la \</span>
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26
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> --movedev debian/tmp/usr/include/libpll usr/include \</span>
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27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> debian/tmp/usr/lib/*.so</span></pre>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext">override_dh_missing:</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> find debian/tmp -name "*.la" -delete</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> dh_missing</span></pre>
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