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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/sina">Debian Med / sina</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/f4cde295b116d95e1b2af159d5dc2523365a954e">f4cde295</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/c287bcbcdc7f9cca5055a7128522d08a544f371d">c287bcbc</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/1b4f4f67a07c6aafdbbef4cdc8c4229eb5dc3c57">1b4f4f67</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.6.1'
Update to upstream version '1.6.1'
with Debian dir d0f4ea13f98effaad3d80615a04e0693dca4df35</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/aecd5cb61a1f6d057433477aa2925936de58e823">aecd5cb6</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/daea071a54e81e56a295f0ced5770e7c2f5ab148">daea071a</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/d11d11c22e5b9e59cbfb19a89f64b30452ab07e2">d11d11c2</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Remove trailing whitespace in debian/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/50b087c1d7eb4d3f45f571bd305a6e2dec5e3325">50b087c1</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/7937f146e7443752b4c5073d71a0a867577a9db3">7937f146</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:45+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/d14df3aa80f7511ce114ed135555289acd2947c0">d14df3aa</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:27:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/sina/-/commit/053aad3633182b6619a9d93cd52135455e0b7cc4">053aad36</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2020-06-08T18:54:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Still running into compilation issue - libtbb kills it
</pre>
</li>
</ul>
<h4>18 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#ab80575e3474862fb5fcff78d4bc4c53e334988e">
.bumpversion.cfg
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">
−
debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#5c7fe6d005e2933d378024ca390579ec62298c22">
<span class="new-file">
+
debian/patches/configure.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#892feb4a5958bad0e09454b6fb7420dc1a56750d">
doc/source/CHANGELOG.rst
</a>
</li>
<li class="file-stats">
<a href="#0f2000290709d77644668dd11490f55053178ad1">
doc/source/install.rst
</a>
</li>
<li class="file-stats">
<a href="#2e70686754ddd5a2f43590e15ae17ddfa33b2e81">
src/kmer_search.cpp
</a>
</li>
<li class="file-stats">
<a href="#b3b3dada3b566634b838bdbed9635bcc06fa4289">
src/progress.h
</a>
</li>
<li class="file-stats">
<a href="#12cdcefc951303933149bd0ff07fd4c10aa06e6d">
src/query_arb.cpp
</a>
</li>
<li class="file-stats">
<a href="#632c9f648ae596e4951b1610f7a71300c5e91870">
src/search_filter.cpp
</a>
</li>
<li class="file-stats">
<a href="#52c1b2a7c8e61412195308d7ad8a3e75870f6827">
src/sina.cpp
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="ab80575e3474862fb5fcff78d4bc4c53e334988e">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#ab80575e3474862fb5fcff78d4bc4c53e334988e"><strong>.bumpversion.cfg</strong></a>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">[bumpversion]</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">current_version = 1.6.<span class="idiff left right">0</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">current_version = 1.6.<span class="idiff left right">1</span></span>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">parse = (?P<major>\d+)\.(?P<minor>\d+)\.(?P<patch>\d+)(\-(?P<stage>(dev|rc)))?(\.(?P<again>\d+))?</span>
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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">serialize = </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
5
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> {major}.{minor}.{patch}-{stage}.{again}</span>
</pre>
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</tr>
</table>
<br>
</li>
<li id="dea01dd89a3b602828e630677fde5d77c06441c8">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#dea01dd89a3b602828e630677fde5d77c06441c8"><strong>.travis.yml</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,7 +19,6 @@ install:</td>
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<td class="diff-line-num old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">./ci_scripts/install_conda.sh</span></span>
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<td class="diff-line-num old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">source $BASH_ENV</span></span>
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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda list</span></span>
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<td class="diff-line-num old old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">find $MINICONDA -name '*.la' -print0 | xargs -0 rm</span></span>
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<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">export LDFLAGS="$LDFLAGS -Wl,-rpath -Wl,$MINICONDA/lib"</span></span>
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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">case "$(uname)" in</span></span>
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<td class="diff-line-num new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="yaml"> <span class="s" style="color: #d14;">Linux) OSNAME=linux;;</span></span>
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<li id="87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#87db583be5c13c1f7b3c958b10e03d67b6a2ca06"><strong>configure.ac</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># Init</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">AC_INIT([SINA],[1.6.<span class="idiff left right">0</span>],[elmar@pruesse.net],,[http://github.com/epruesse/SINA])</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">AC_INIT([SINA],[1.6.<span class="idiff left right">1</span>],[elmar@pruesse.net],,[http://github.com/epruesse/SINA])</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">AC_COPYRIGHT([Copyright (c) 2005-2018 Elmar Pruesse])</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">AC_CONFIG_AUX_DIR([build-aux])</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">AC_CONFIG_MACRO_DIR([m4])</span>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">sina (1.6.<span class="idiff left right">0-1) UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">sina (1.6.<span class="idiff left right">1-1) UNSTABLE</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * Initial release (Closes: #<bug>)</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> TODO: Needs libarb</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> https://salsa.debian.org/med-team/libarb</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> TODO: test_data directory is required to run build-time tests. It is not</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> included into the upstream tarball.</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Thu, 13 Jun 2019 08:25:26 +0200</span></pre>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> [ Steffen Moeller ]</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Standards-Version: 4.5.0 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> * Remove trailing whitespace in debian/changelog (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * Add salsa-ci file (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> Repository-Browse.</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Mon, 08 Jun 2020 18:27:48 +0200</span></pre>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">12</span></pre>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,7 +4,7 @@ Uploaders: Andreas Tille <tille@debian.org>,</td>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Liubov Chuprikova <chuprikovalv@gmail.com></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right"> (>= 12~</span>),</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right">-compat (= 13</span>),</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> pkg-config,</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> libboost-filesystem-dev,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> libboost-iostreams-dev,</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -18,10 +18,11 @@ Build-Depends: debhelper (>= 12~),</td>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> zlib1g-dev,</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> libarb-dev,</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> python3-sphinx</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">3</span>.0</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5</span>.0</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/sina</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/sina.git</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Homepage: https://github.com/epruesse/SINA</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext">Package: sina</span>
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27
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28
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext">Architecture: any</span>
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<li id="5c7fe6d005e2933d378024ca390579ec62298c22">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#5c7fe6d005e2933d378024ca390579ec62298c22"><strong>debian/patches/configure.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="gh" style="color: #999;">Index: sina/configure.ac</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- sina.orig/configure.ac</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ sina/configure.ac</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">@@ -179,22 +179,22 @@</span> if test x"$GLIB_LIBS" = x""; then</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"> fi</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> AX_LIB_ARBDB</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-if test x"$ARB_LIBS" = x""; then</span></span>
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- missing_libs="$missing_libs</span></span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ARB libraries (libARBDB)"</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-fi</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if test x"$ARB_LIBS" = x""; then</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# missing_libs="$missing_libs</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# ARB libraries (libARBDB)"</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#fi</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> AX_LIB_ARB_PROBE</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-if test x"$ARB_PROBE_LIBS" = x""; then</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- missing_libs="$missing_libs</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ARB PROBE library (PROBE_COM/client.a)"</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-fi</span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if test x"$ARB_PROBE_LIBS" = x""; then</span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# missing_libs="$missing_libs</span></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# ARB PROBE library (PROBE_COM/client.a)"</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#fi</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> </span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> AX_LIB_ARB_HELIX</span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-if test x"$ARB_HELIX_LIBS" = x""; then</span></span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- missing_libs="$missing_libs</span></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ARB HELIX library (SL/HELIX/HELIX.a)"</span></span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-fi</span></span>
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33
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if test x"$ARB_HELIX_LIBS" = x""; then</span></span>
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34
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# missing_libs="$missing_libs</span></span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# ARB HELIX library (SL/HELIX/HELIX.a)"</span></span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#fi</span></span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> </span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"> AX_ARB_CHECK_FUNC([GBT_FIND_SEQUENCE], [GBT_find_sequence(NULL, NULL)])</span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"> AX_ARB_STATUS_RETURN_TYPE</span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="p">@@ -228,10 +228,10 @@</span> done</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> AC_SUBST(ARB_FILES)</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> </span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"> AX_LIB_TBB</span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-if test x"$TBB_LIB" = x""; then</span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- missing_libs="$missing_libs</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- Intel Threading Building Blocks (libtbb)"</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-fi</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if test x"$TBB_LIB" = x""; then</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# missing_libs="$missing_libs</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# Intel Threading Building Blocks (libtbb)"</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#fi</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"> AX_LIB_TBB_MALLOC</span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"> </span></pre>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">fix_libs.patch</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">configure.patch</span></pre>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,10 +12,16 @@ include /usr/share/dpkg/default.mk</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dh $@</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">override_dh_auto_configure:</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> dh_auto_configure -- --with-arbhome=/usr/lib/x86_64-linux-gnu/arb</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> dh_auto_configure -- --with-arbhome=/usr/lib/arb \</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> --without-tbb --disable-static</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">override_dh_auto_test:</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"># do_stuff_for_testing</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">#endif</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext">override_dh_auto_clean:</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> dh_auto_clean</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> rm -f config.log</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> rm -f doc/doctrees/CHANGELOG.doctree doc/doctrees/README.doctree doc/doctrees/commandline.doctree doc/doctrees/environment.pickle doc/doctrees/index.doctree doc/doctrees/install.doctree doc/build.stamp config.status src/sina.o</span></pre>
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<li id="b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/epruesse/SINA/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/epruesse/SINA/issues/new</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Reference:</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> - Author: Elmar Pruesse and Jörg Peplies and Frank Oliver Glöckner</span>
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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Title: ></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,3 +22,5 @@ Registry:</td>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> Entry: sina</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> - Name: bio.tools</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> Entry: sina</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">Repository: https://github.com/epruesse/SINA.git</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">Repository-Browse: https://github.com/epruesse/SINA</span></pre>
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<li id="892feb4a5958bad0e09454b6fb7420dc1a56750d">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#892feb4a5958bad0e09454b6fb7420dc1a56750d"><strong>doc/source/CHANGELOG.rst</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,6 +3,10 @@</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Changelog</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">=========</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">Version 1.6.1:</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">--------------</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> - fix progress bar not honoring verbosity (:issue:`85`)</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Version 1.6.0:</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">--------------</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> - make internal kmer engine the default (:issue:`23`)</span>
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<li id="0f2000290709d77644668dd11490f55053178ad1">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#0f2000290709d77644668dd11490f55053178ad1"><strong>doc/source/install.rst</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -71,16 +71,16 @@ are available on the `SINA releases`_ page at Github. Head on over</td>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext">there and download the Linux or Macos one. Inside the folder created</span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext">by unpacking the archive, you should find a `sina` executable::</span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext"> tar xf ~/Downloads/sina-1.6.<span class="idiff left right">0</span>-linux.tar.gz</span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="plaintext"> ~/Downloads/sina-1.6.<span class="idiff left right">0</span>-linux/sina --help</span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> tar xf ~/Downloads/sina-1.6.<span class="idiff left right">1</span>-linux.tar.gz</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> ~/Downloads/sina-1.6.<span class="idiff left right">1</span>-linux/sina --help</span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext">To install SINA system wide, place the contents of the archive in</span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext">`/opt` and create symlinks into `/usr/local/bin`::</span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> wget https://github.com/epruesse/SINA/releases/download/v1.6.<span class="idiff left right">0</span>/sina-1.5.0-linux.tar.gz</span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext"> sudo tar xf sina-1.6.<span class="idiff left right">0</span>-linux.tar.gz -C /opt</span>
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="plaintext"> rm sina-1.6.<span class="idiff left right">0</span>-linux.tar.gz</span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> sudo ln -s /opt/sina-1.6.<span class="idiff left right">0</span>-linux /opt/sina</span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> wget https://github.com/epruesse/SINA/releases/download/v1.6.<span class="idiff left right">1</span>/sina-1.5.0-linux.tar.gz</span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext"> sudo tar xf sina-1.6.<span class="idiff left right">1</span>-linux.tar.gz -C /opt</span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> rm sina-1.6.<span class="idiff left right">1</span>-linux.tar.gz</span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> sudo ln -s /opt/sina-1.6.<span class="idiff left right">1</span>-linux /opt/sina</span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> sudo ln -s /opt/sina/bin/sina /usr/local/bin/sina</span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext">.. _`SINA releases`: https://github.com/epruesse/SINA/releases</span>
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<li id="2e70686754ddd5a2f43590e15ae17ddfa33b2e81">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#2e70686754ddd5a2f43590e15ae17ddfa33b2e81"><strong>src/kmer_search.cpp</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -152,7 +152,7 @@ unsigned int kmer_search::size() const { return pimpl->n_sequences; }</td>
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">IndexBuilder</span> <span class="p">{</span></span>
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154
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="cpp"> <span class="n" style="color: #333;">kmer_search</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">impl</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">idx</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left right">P</span>rogress</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">p</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left right">logger_p</span>rogress</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">p</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">vlimap</span><span class="o" style="font-weight: 600;">*></span> <span class="n" style="color: #333;">kmer_idx</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="cpp"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -205,7 +205,7 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="cpp"> <span class="n" style="color: #333;">IndexBuilder</span><span class="p">(</span><span class="n" style="color: #333;">kmer_search</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">impl</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">idx_</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left right">P</span>rogress</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">p_</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="cpp"> <span class="n" style="color: #333;">IndexBuilder</span><span class="p">(</span><span class="n" style="color: #333;">kmer_search</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">impl</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">idx_</span><span class="p">,</span> <span class="n" style="color: #333;"><span class="idiff left right">logger_p</span>rogress</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">p_</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">idx</span><span class="p">(</span><span class="n" style="color: #333;">idx_</span><span class="p">),</span> <span class="n" style="color: #333;">p</span><span class="p">(</span><span class="n" style="color: #333;">p_</span><span class="p">),</span> <span class="n" style="color: #333;">kmer_idx</span><span class="p">(</span><span class="n" style="color: #333;">idx</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">n_kmers</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="cpp"> <span class="p">}</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -243,7 +243,7 @@ kmer_search::impl::build() {</td>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="cpp"> <span class="n" style="color: #333;">sequence_names</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">arbdb</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">getSequenceNames</span><span class="p">();</span></span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="cpp"> <span class="n" style="color: #333;">n_sequences</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sequence_names</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">();</span></span>
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left">Progress</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">p</span></span><span class="p"><span class="idiff right">(</span></span><span class="s" style="color: #d14;">"Building Index"</span><span class="p">,</span> <span class="n" style="color: #333;">n_sequences</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left">logger_progress</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">p</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">logger</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff right"> </span><span class="s" style="color: #d14;">"Building Index"</span><span class="p">,</span> <span class="n" style="color: #333;">n_sequences</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="cpp"> <span class="n" style="color: #333;">IndexBuilder</span> <span class="n" style="color: #333;">bi</span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">,</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">p</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="cpp"> <span class="n" style="color: #333;">tbb</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">parallel_reduce</span><span class="p">(</span><span class="n" style="color: #333;">tbb</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">blocked_range</span><span class="o" style="font-weight: 600;"><</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span><span class="o" style="font-weight: 600;">></span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">n_sequences</span><span class="p">),</span> <span class="n" style="color: #333;">bi</span><span class="p">);</span></span>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#b3b3dada3b566634b838bdbed9635bcc06fa4289"><strong>src/progress.h</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -51,6 +51,8 @@ static const char* bar_syms_ascii[] = {</td>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="cpp"><span class="cm" style="color: #998; font-style: italic;">/* abstract base rendering progress bar</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="cpp"><span class="cm" style="color: #998; font-style: italic;"> * needs show_progress() filled in */</span></span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">base_progress</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">using</span> <span class="kt" style="color: #458; font-weight: 600;">clock_t</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">chrono</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">steady_clock</span><span class="p">;</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -63,9 +65,7 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="cpp"> <span class="n" style="color: #333;">_bar_syms</span><span class="p">(</span><span class="n" style="color: #333;">ascii</span><span class="o" style="font-weight: 600;">?</span><span class="n" style="color: #333;">bar_syms_ascii</span><span class="o" style="font-weight: 600;">:</span><span class="n" style="color: #333;">bar_syms_unicode</span><span class="p">),</span></span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="cpp"> <span class="n" style="color: #333;">_nsyms</span><span class="p">(</span><span class="n" style="color: #333;">ascii</span><span class="o" style="font-weight: 600;">?</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">extent</span><span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">decltype</span><span class="p">(</span><span class="n" style="color: #333;">bar_syms_ascii</span><span class="p">)</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">value</span></span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">extent</span><span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">decltype</span><span class="p">(</span><span class="n" style="color: #333;">bar_syms_unicode</span><span class="p">)</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">value</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">//show_progress();</span></span>
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="cpp"> <span class="p">{}</span></span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">restart</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">desc</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">""</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">total</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="cpp"> <span class="n" style="color: #333;">_n</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -204,6 +204,7 @@ private:</td>
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">nototal_fmt</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"{desc}: {n} [{elapsed:%T}]{eol}"</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="cpp"><span class="cm" style="color: #998; font-style: italic;">/* Progress monitor writing directly to a file */</span></span>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Progress</span> <span class="k" style="font-weight: 600;">final</span> <span class="o" style="font-weight: 600;">:</span> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">base_progress</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="cpp"> <span class="n" style="color: #333;">Progress</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">desc</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">""</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">total</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">ascii</span><span class="o" style="font-weight: 600;">=</span><span class="nb" style="color: #0086b3;">false</span><span class="p">,</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -227,6 +228,8 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC228" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC229" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC230" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">show_progress</span><span class="p">(</span><span class="n" style="color: #333;">timepoint_t</span> <span class="n" style="color: #333;">now</span><span class="o" style="font-weight: 600;">=</span><span class="kt" style="color: #458; font-weight: 600;">clock_t</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">now</span><span class="p">())</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// called from base_progress when it decided the progress bar needs</span></span>
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// to be printed again</span></span>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">buf</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="cpp"> <span class="n" style="color: #333;">render_progress</span><span class="p">(</span><span class="n" style="color: #333;">now</span><span class="p">,</span> <span class="n" style="color: #333;">_width</span><span class="p">,</span> <span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">copy</span><span class="p">(</span><span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">back_inserter</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">));</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -239,63 +242,72 @@ private:</td>
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<pre style="margin: 0;"> <span id="LC242" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">FILE</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">_file</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_msg</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="cpp"><span class="cm" style="color: #998; font-style: italic;">/****** spdlog integration ****/</span></span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_line</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_<span class="idiff left right">msg_sink</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_<span class="idiff left right">line_registry</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">status_<span class="idiff left right">msg_sink</span></span><span class="p">()</span> <span class="p">{}</span></span>
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">status_<span class="idiff left right">line_registry</span></span><span class="p">()</span> <span class="p">{}</span></span>
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<pre style="margin: 0;"> <span id="LC252" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">add_status</span><span class="p"><span class="idiff left">(</span></span><span class="n" style="color: #333;"><span class="idiff right">status_msg</span></span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_<span class="idiff left right">messag</span>es</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">add_status<span class="idiff left">_line</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff right">status_line</span></span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_<span class="idiff left right">lin</span>es</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC255" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">remove_status</span><span class="p">(</span><span class="n" style="color: #333;">status_msg</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_messages</span><span class="p">.</span><span class="n" style="color: #333;">erase</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">remove</span><span class="p">(</span><span class="n" style="color: #333;">_status_messages</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">_status_messages</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">msg</span><span class="p">),</span></span>
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<pre style="margin: 0;">-<span id="LC254" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_messages</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">());</span></span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">remove_status_line</span><span class="p">(</span><span class="n" style="color: #333;">status_line</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="p">{</span></span>
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257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_lines</span><span class="p">.</span><span class="n" style="color: #333;">erase</span><span class="p">(</span></span>
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258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">remove</span><span class="p">(</span><span class="n" style="color: #333;">_status_lines</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">_status_lines</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">msg</span><span class="p">),</span></span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="cpp"> <span class="n" style="color: #333;">_status_lines</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">());</span></span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="cpp"> <span class="p">}</span></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_line</span><span class="o" style="font-weight: 600;">*>&</span> <span class="n" style="color: #333;">get_status_lines</span><span class="p">()</span> <span class="p">{</span></span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">_status_lines</span><span class="p">;</span></span>
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255
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263
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<pre style="margin: 0;"> <span id="LC263" class="line" lang="cpp"> <span class="p">}</span></span>
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256
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">print_status_message</span><span class="p">(</span><span class="n" style="color: #333;">status_msg</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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257
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="cpp"></span>
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258
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">update_messages</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">);</span></span>
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259
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264
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<pre style="margin: 0;"> <span id="LC264" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">print_status_line_registry</span><span class="p">()</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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260
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266
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<pre style="margin: 0;"> <span id="LC266" class="line" lang="cpp"></span>
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261
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267
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<pre style="margin: 0;"> <span id="LC267" class="line" lang="cpp"><span class="nl">private:</span></span>
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262
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_msg</span><span class="o" style="font-weight: 600;">*></span> <span class="n" style="color: #333;">_status_messages</span><span class="p">;</span></span>
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268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_line</span><span class="o" style="font-weight: 600;">*></span> <span class="n" style="color: #333;">_status_lines</span><span class="p">;</span></span>
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269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">_change_since_last_print</span><span class="p">{</span><span class="mi" style="color: #099;">0</span><span class="p">};</span></span>
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263
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270
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC271" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC272" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_<span class="idiff left right">msg</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">status_<span class="idiff left right">line</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC274" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="cpp"> <span class="n" style="color: #333;">status_<span class="idiff left right">msg</span></span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">shared_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">logger</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="cpp"> <span class="n" style="color: #333;">status_<span class="idiff left right">line</span></span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">shared_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">logger</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level_enum</span> <span class="n" style="color: #333;">level</span><span class="p">)</span></span>
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277
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_logger</span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">),</span> <span class="n" style="color: #333;">_level</span><span class="p">(</span><span class="n" style="color: #333;">level</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="cpp"> <span class="cm" style="color: #998; font-style: italic;">/* on creation, register it with all sinks that understand about us */</span></span>
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">sink</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sinks</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_<span class="idiff left right">msg_sink</span></span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_<span class="idiff left right">line_registry</span></span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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274
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<pre style="margin: 0;"> <span id="LC282" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">ptr</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">add_status</span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">add_status<span class="idiff left right">_line</span></span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC284" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC285" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC286" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC287" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC280" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">status_msg</span><span class="p">()</span> <span class="p">{</span></span>
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288
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">status_line</span><span class="p">()</span> <span class="p">{</span></span>
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289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="cpp"> <span class="cm" style="color: #998; font-style: italic;">/* on deletion, deregister from all sinks */</span></span>
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281
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290
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<pre style="margin: 0;"> <span id="LC290" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">sink</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sinks</span><span class="p">())</span> <span class="p">{</span></span>
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282
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_<span class="idiff left right">msg_sink</span></span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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291
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<pre style="margin: 0;">+<span id="LC291" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_<span class="idiff left right">line_registry</span></span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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283
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292
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<pre style="margin: 0;"> <span id="LC292" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">ptr</span><span class="p">)</span> <span class="p">{</span></span>
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284
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">remove_status</span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">remove_status<span class="idiff left right">_line</span></span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="cpp"> <span class="p">}</span></span>
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296
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">trigger_message_print</span><span class="p">()</span> <span class="p">{</span></span>
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298
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<pre style="margin: 0;">+<span id="LC298" class="line" lang="cpp"> <span class="cm" style="color: #998; font-style: italic;">/* trigger (re)print of this status line */</span></span>
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299
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">trigger_print_status_lines</span><span class="p">()</span> <span class="p">{</span></span>
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290
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300
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">sink</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sinks</span><span class="p">())</span> <span class="p">{</span></span>
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291
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_msg_sink</span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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292
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">ptr</span><span class="p">)</span> <span class="p">{</span></span>
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293
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<pre style="margin: 0;">-<span id="LC293" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">print_status_message</span><span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="p">);</span></span>
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301
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">should_log</span><span class="p">(</span><span class="n" style="color: #333;">get_level</span><span class="p">()))</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC302" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">ptr</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">dynamic_cast</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">status_line_registry</span><span class="o" style="font-weight: 600;">*></span><span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="p">.</span><span class="n" style="color: #333;">get</span><span class="p">());</span></span>
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303
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<pre style="margin: 0;">+<span id="LC303" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">ptr</span><span class="p">)</span> <span class="p">{</span></span>
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304
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="cpp"> <span class="n" style="color: #333;">ptr</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">print_status_line_registry</span><span class="p">();</span></span>
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305
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<pre style="margin: 0;">+<span id="LC305" class="line" lang="cpp"> <span class="p">}</span></span>
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306
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="cpp"> <span class="p">}</span></span>
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307
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="cpp"> <span class="p">}</span></span>
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296
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308
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="cpp"> <span class="p">}</span></span>
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297
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309
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="cpp"></span>
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298
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">update_messag</span>e</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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310
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">virtual</span> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">render_status_lin</span>e</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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299
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311
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="cpp"></span>
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312
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">static</span> <span class="k" style="font-weight: 600;">const</span> <span class="kt" style="color: #458; font-weight: 600;">char</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">magic_filename</span><span class="p">()</span> <span class="p">{</span></span>
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301
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313
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<pre style="margin: 0;"> <span id="LC313" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">static</span> <span class="k" style="font-weight: 600;">const</span> <span class="kt" style="color: #458; font-weight: 600;">char</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">file</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"PROGRESS MONITOR"</span><span class="p">;</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="304" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="316" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -304,14 +316,17 @@ public:</td>
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316
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<pre style="margin: 0;"> <span id="LC316" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">should_log</span><span class="p">()</span> <span class="p">{</span></span>
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305
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317
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<pre style="margin: 0;"> <span id="LC317" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">should_log</span><span class="p">(</span><span class="n" style="color: #333;">_level</span><span class="p">);</span></span>
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306
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318
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<pre style="margin: 0;"> <span id="LC318" class="line" lang="cpp"> <span class="p">}</span></span>
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319
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<pre style="margin: 0;">+<span id="LC319" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level_enum</span> <span class="n" style="color: #333;">get_level</span><span class="p">()</span> <span class="p">{</span></span>
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320
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<pre style="margin: 0;">+<span id="LC320" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">_level</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC321" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC322" class="line" lang="cpp"></span>
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308
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">lo</span>g</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC323" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">send_log_ms</span>g</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">)</span> <span class="p">{</span></span>
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309
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324
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<pre style="margin: 0;"> <span id="LC324" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">using</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">fmt_helper</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">to_string_view</span><span class="p">;</span></span>
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310
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325
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<pre style="margin: 0;"> <span id="LC325" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">source_loc</span> <span class="n" style="color: #333;">loc</span><span class="p">;</span></span>
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311
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326
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<pre style="margin: 0;"> <span id="LC326" class="line" lang="cpp"> <span class="n" style="color: #333;">loc</span><span class="p">.</span><span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">magic_filename</span><span class="p">();</span></span>
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312
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327
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<pre style="margin: 0;"> <span id="LC327" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log_msg</span> <span class="n" style="color: #333;">msg</span><span class="p">{</span><span class="n" style="color: #333;">loc</span><span class="p">,</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">name</span><span class="p">(),</span> <span class="n" style="color: #333;">_level</span><span class="p">,</span> <span class="n" style="color: #333;">to_string_view</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">)};</span></span>
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313
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328
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<pre style="margin: 0;"> <span id="LC328" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">sink</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sinks</span><span class="p">())</span> <span class="p">{</span></span>
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314
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">should_log</span><span class="p">(</span><span class="n" style="color: #333;"><span class="idiff left right">_level</span></span><span class="p">))</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC329" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">sink</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">should_log</span><span class="p">(</span><span class="n" style="color: #333;"><span class="idiff left">get_level</span></span><span class="p"><span class="idiff right">()</span>))</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC330" class="line" lang="cpp"> <span class="n" style="color: #333;">sink</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC331" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC332" class="line" lang="cpp"> <span class="p">}</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -319,15 +334,9 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC334" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC335" class="line" lang="cpp"><span class="nl">private:</span></span>
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<pre style="margin: 0;"> <span id="LC336" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">shared_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">_logger</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level_enum</span> <span class="n" style="color: #333;">_level</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC337" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level_enum</span> <span class="n" style="color: #333;">_level</span><span class="p"><span class="idiff left">{</span></span><span class="n" style="color: #333;"><span class="idiff">spdlog</span></span><span class="o" style="font-weight: 600;"><span class="idiff">::</span></span><span class="n" style="color: #333;"><span class="idiff">level</span></span><span class="o" style="font-weight: 600;"><span class="idiff">::</span></span><span class="n" style="color: #333;"><span class="idiff">off</span></span><span class="p"><span class="idiff right">}</span>;</span></span>
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<pre style="margin: 0;"> <span id="LC338" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC339" class="line" lang="cpp"></span>
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325
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<pre style="margin: 0;">-<span id="LC325" class="line" lang="cpp"><span class="kr" style="font-weight: 600;">inline</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">status_msg_sink</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">update_messages</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC326" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">msg</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">_status_messages</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC327" class="line" lang="cpp"> <span class="n" style="color: #333;">msg</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">update_message</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="n" style="color: #333;">width</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC328" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC329" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">_status_messages</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">();</span></span>
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<pre style="margin: 0;">-<span id="LC330" class="line" lang="cpp"><span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC340" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC341" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">sigwinch_mixin</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC342" class="line" lang="cpp"><span class="nl">protected:</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -391,9 +400,9 @@ private:</td>
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<pre style="margin: 0;"> <span id="LC400" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC401" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC402" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span><span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">typename</span> <span class="nc" style="color: #458; font-weight: 600;">TargetStream</span><span class="p">,</span> <span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">ConsoleMutex</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC394" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">terminal_sink</span> </span>
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<pre style="margin: 0;">+<span id="LC403" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">terminal_sink</span> <span class="k" style="font-weight: 600;"><span class="idiff left right">final</span></span></span>
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<pre style="margin: 0;"> <span id="LC404" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">sinks</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ansicolor_sink</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">TargetStream</span><span class="p">,</span> <span class="n" style="color: #333;">ConsoleMutex</span><span class="o" style="font-weight: 600;">></span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC396" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">status_<span class="idiff left right">msg_sink</span></span><span class="p">,</span> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">sigwinch_mixin</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC405" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">status_<span class="idiff left right">line_registry</span></span><span class="p">,</span> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;">sigwinch_mixin</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC406" class="line" lang="cpp"><span class="nl">public:</span></span>
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398
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<pre style="margin: 0;"> <span id="LC407" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">using</span> <span class="n" style="color: #333;">super</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">sinks</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ansicolor_sink</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">TargetStream</span><span class="p">,</span> <span class="n" style="color: #333;">ConsoleMutex</span><span class="o" style="font-weight: 600;">></span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC408" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">using</span> <span class="n" style="color: #333;">mutex_t</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">typename</span> <span class="n" style="color: #333;">ConsoleMutex</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">mutex_t</span><span class="p">;</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -405,27 +414,52 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC414" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">terminal_sink</span><span class="p">()</span> <span class="k" style="font-weight: 600;">override</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">default</span><span class="p">;</span></span>
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416
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<pre style="margin: 0;"> <span id="LC416" class="line" lang="cpp"></span>
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408
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<pre style="margin: 0;">-<span id="LC408" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">log</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log_msg</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="k" style="font-weight: 600;">override</span> <span class="p">{</span></span>
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409
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<pre style="margin: 0;">-<span id="LC409" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">not</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">should_do_colors_</span><span class="p">)</span> <span class="p">{</span></span>
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410
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<pre style="margin: 0;">-<span id="LC410" class="line" lang="cpp"> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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417
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<pre style="margin: 0;">+<span id="LC417" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// normal log message coming in</span></span>
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418
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<pre style="margin: 0;">+<span id="LC418" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">log</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log_msg</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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419
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<pre style="margin: 0;">+<span id="LC419" class="line" lang="cpp"> <span class="n" style="color: #333;">_print</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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420
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<pre style="margin: 0;">+<span id="LC420" class="line" lang="cpp"> <span class="p">}</span></span>
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421
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<pre style="margin: 0;">+<span id="LC421" class="line" lang="cpp"></span>
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422
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<pre style="margin: 0;">+<span id="LC422" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// update to status coming in</span></span>
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423
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<pre style="margin: 0;">+<span id="LC423" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">print_status_line_registry</span><span class="p">()</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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424
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<pre style="margin: 0;">+<span id="LC424" class="line" lang="cpp"> <span class="n" style="color: #333;">_print</span><span class="p">(</span><span class="nb" style="color: #0086b3;">nullptr</span><span class="p">);</span></span>
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425
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<pre style="margin: 0;">+<span id="LC425" class="line" lang="cpp"> <span class="p">}</span></span>
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426
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<pre style="margin: 0;">+<span id="LC426" class="line" lang="cpp"></span>
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427
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<pre style="margin: 0;">+<span id="LC427" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">_print</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log_msg</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">)</span> <span class="p">{</span></span>
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428
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<pre style="margin: 0;">+<span id="LC428" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">not</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">should_do_colors_</span><span class="p">)</span> <span class="p">{</span> <span class="c1" style="color: #998; font-style: italic;">// not a tty</span></span>
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429
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<pre style="margin: 0;">+<span id="LC429" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">msg</span> <span class="o" style="font-weight: 600;">!=</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span> <span class="p">{</span> <span class="c1" style="color: #998; font-style: italic;">// got a msg</span></span>
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430
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<pre style="margin: 0;">+<span id="LC430" class="line" lang="cpp"> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">);</span> <span class="c1" style="color: #998; font-style: italic;">// pass it upstream</span></span>
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431
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<pre style="margin: 0;">+<span id="LC431" class="line" lang="cpp"> <span class="p">}</span></span>
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411
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432
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<pre style="margin: 0;"> <span id="LC432" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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412
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433
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<pre style="margin: 0;"> <span id="LC433" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC413" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">.</span><span class="n" style="color: #333;">source</span><span class="p">.</span><span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">==</span> <span class="n" style="color: #333;">status_msg</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">magic_filename</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC414" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span> <span class="c1" style="color: #998; font-style: italic;">// special messages handled elsewhere</span></span>
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<pre style="margin: 0;">-<span id="LC415" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC416" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">messages</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC417" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">nlines</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">update_messages</span><span class="p">(</span><span class="n" style="color: #333;">messages</span><span class="p">,</span> <span class="n" style="color: #333;">_ncols</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC434" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC435" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">check_got_sigwinch</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC436" class="line" lang="cpp"> <span class="n" style="color: #333;">update_term_width</span><span class="p">();</span></span>
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<pre style="margin: 0;"> <span id="LC437" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC438" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC439" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// render status lines</span></span>
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<pre style="margin: 0;">+<span id="LC440" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">status_text</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC441" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">nlines</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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442
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<pre style="margin: 0;">+<span id="LC442" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">line</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">get_status_lines</span><span class="p">())</span> <span class="p">{</span></span>
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443
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<pre style="margin: 0;">+<span id="LC443" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="k" style="font-weight: 600;">this</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">should_log</span><span class="p">(</span><span class="n" style="color: #333;">line</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">get_level</span><span class="p">()))</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC444" class="line" lang="cpp"> <span class="n" style="color: #333;">line</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">render_status_line</span><span class="p">(</span><span class="n" style="color: #333;">status_text</span><span class="p">,</span> <span class="n" style="color: #333;">_ncols</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC445" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">++</span> <span class="n" style="color: #333;">nlines</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC446" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC447" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC448" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC449" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// move back up to last log line</span></span>
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<pre style="margin: 0;"> <span id="LC450" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">lock_guard</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">mutex_t</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">lock</span><span class="p">(</span><span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">mutex_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC422" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;"><span class="idiff left right">n</span>lines</span><span class="p">;</span> <span class="o" style="font-weight: 600;">++</span><span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC451" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;"><span class="idiff left right">_last_status_</span>lines</span><span class="p">;</span> <span class="o" style="font-weight: 600;">++</span><span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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452
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<pre style="margin: 0;"> <span id="LC452" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC453" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC454" class="line" lang="cpp"> <span class="n" style="color: #333;">_last_status_lines</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">nlines</span><span class="p">;</span></span>
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455
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<pre style="margin: 0;"> <span id="LC455" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC426" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">term_clear_line</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">term_clear_line</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC427" class="line" lang="cpp"> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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428
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<pre style="margin: 0;">-<span id="LC428" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">messages</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">messages</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC456" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// print message if we have one and it's not an update for other sinks</span></span>
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457
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<pre style="margin: 0;">+<span id="LC457" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">msg</span> <span class="o" style="font-weight: 600;">!=</span> <span class="nb" style="color: #0086b3;">nullptr</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">msg</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">source</span><span class="p">.</span><span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">status_line</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">magic_filename</span><span class="p">())</span> <span class="p">{</span></span>
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458
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<pre style="margin: 0;">+<span id="LC458" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">term_clear_line</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">term_clear_line</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC459" class="line" lang="cpp"> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">log</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">msg</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC460" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC461" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC462" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">status_text</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">status_text</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC463" class="line" lang="cpp"> <span class="n" style="color: #333;">fflush</span><span class="p">(</span><span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC464" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC465" class="line" lang="cpp"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -438,26 +472,11 @@ public:</td>
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<pre style="margin: 0;"> <span id="LC472" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC473" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC474" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC441" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">print_status_message</span><span class="p">(</span><span class="n" style="color: #333;">status_msg</span><span class="o" style="font-weight: 600;">*</span><span class="p">)</span> <span class="k" style="font-weight: 600;">override</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC442" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">not</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">should_do_colors_</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC443" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC444" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC445" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">messages</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC446" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">nlines</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">update_messages</span><span class="p">(</span><span class="n" style="color: #333;">messages</span><span class="p">,</span> <span class="n" style="color: #333;">_ncols</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC447" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">check_got_sigwinch</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC448" class="line" lang="cpp"> <span class="n" style="color: #333;">update_term_width</span><span class="p">();</span></span>
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<pre style="margin: 0;">-<span id="LC449" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC450" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">lock_guard</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">mutex_t</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">lock</span><span class="p">(</span><span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">mutex_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC451" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">nlines</span><span class="p">;</span> <span class="o" style="font-weight: 600;">++</span><span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC452" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">term_move_up</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC453" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC454" class="line" lang="cpp"> <span class="n" style="color: #333;">fwrite</span><span class="p">(</span><span class="n" style="color: #333;">messages</span><span class="p">.</span><span class="n" style="color: #333;">data</span><span class="p">(),</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="n" style="color: #333;">messages</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">(),</span> <span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC455" class="line" lang="cpp"> <span class="n" style="color: #333;">fflush</span><span class="p">(</span><span class="n" style="color: #333;">super</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">target_file_</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC456" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC475" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">term_move_up</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\x1B</span><span class="s" style="color: #d14;">[A"</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC476" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">term_clear_line</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\x1B</span><span class="s" style="color: #d14;">[K"</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC477" class="line" lang="cpp"><span class="nl">private:</span></span>
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<pre style="margin: 0;">-<span id="LC460" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">_ncols</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC478" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">_ncols</span><span class="p">{</span><span class="mi" style="color: #099;">60</span><span class="p">};</span></span>
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<pre style="margin: 0;">+<span id="LC479" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">_last_status_lines</span><span class="p">{</span><span class="mi" style="color: #099;">0</span><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC480" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;"> <span id="LC481" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC482" class="line" lang="cpp"><span class="k" style="font-weight: 600;">using</span> <span class="n" style="color: #333;">terminal_stdout_sink_mt</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">terminal_sink</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">console_stdout</span><span class="p">,</span> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">details</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">console_mutex</span><span class="o" style="font-weight: 600;">></span><span class="p">;</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -477,7 +496,7 @@ inline std::shared_ptr<spdlog::logger> stderr_terminal_mt(const std::string &log</td>
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496
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<pre style="margin: 0;"> <span id="LC496" class="line" lang="cpp"><span class="p">}</span></span>
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497
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<pre style="margin: 0;"> <span id="LC497" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC498" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC480" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">logger_progress</span> <span class="k" style="font-weight: 600;">final</span> <span class="o" style="font-weight: 600;">:</span> <span class="k" style="font-weight: 600;">public</span> <span class="n" style="color: #333;"><span class="idiff left">base_progress</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">status_msg</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC499" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">logger_progress</span> <span class="k" style="font-weight: 600;">final</span> <span class="o" style="font-weight: 600;">:</span> <span class="k" style="font-weight: 600;">public</span> <span class="idiff left"> </span><span class="n" style="color: #333;"><span class="idiff">base_progress</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">status_line</span></span> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC500" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;"> <span id="LC501" class="line" lang="cpp"> <span class="n" style="color: #333;">logger_progress</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">shared_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">logger</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC502" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">string</span> <span class="n" style="color: #333;">desc</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">""</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">total</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">ascii</span><span class="o" style="font-weight: 600;">=</span><span class="nb" style="color: #0086b3;">false</span><span class="p">,</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -485,28 +504,30 @@ public:</td>
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485
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504
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<pre style="margin: 0;"> <span id="LC504" class="line" lang="cpp"> <span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level_enum</span> <span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">spdlog</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">level</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">warn</span></span>
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505
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<pre style="margin: 0;"> <span id="LC505" class="line" lang="cpp"> <span class="p">)</span></span>
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506
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<pre style="margin: 0;"> <span id="LC506" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">base_progress</span><span class="p">(</span><span class="n" style="color: #333;">desc</span><span class="p">,</span> <span class="n" style="color: #333;">total</span><span class="p">,</span> <span class="n" style="color: #333;">ascii</span><span class="p">),</span></span>
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488
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<pre style="margin: 0;">-<span id="LC488" class="line" lang="cpp"> <span class="n" style="color: #333;">status_<span class="idiff left right">msg</span></span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="n" style="color: #333;">level</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC507" class="line" lang="cpp"> <span class="n" style="color: #333;">status_<span class="idiff left right">line</span></span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="n" style="color: #333;">level</span><span class="p">)</span></span>
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508
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<pre style="margin: 0;"> <span id="LC508" class="line" lang="cpp"> <span class="p">{</span></span>
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509
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<pre style="margin: 0;"> <span id="LC509" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC510" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">logger_progress</span><span class="p">()</span> <span class="p">{</span></span>
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511
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<pre style="margin: 0;"> <span id="LC511" class="line" lang="cpp"> <span class="p">}</span></span>
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512
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<pre style="margin: 0;"> <span id="LC512" class="line" lang="cpp"></span>
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494
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513
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<pre style="margin: 0;"> <span id="LC513" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">show_progress</span><span class="p">(</span><span class="n" style="color: #333;">timepoint_t</span> <span class="n" style="color: #333;">now</span><span class="o" style="font-weight: 600;">=</span><span class="kt" style="color: #458; font-weight: 600;">clock_t</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">now</span><span class="p">())</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC495" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">should_log</span><span class="p">())</span> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC496" class="line" lang="cpp"> <span class="n" style="color: #333;">duration_t</span> <span class="n" style="color: #333;">delta_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">now</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">_last_update</span><span class="p">;</span></span>
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497
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<pre style="margin: 0;">-<span id="LC497" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">delta_time</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">_mininterval</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC498" class="line" lang="cpp"> <span class="n" style="color: #333;">trigger_message_print</span><span class="p">();</span></span>
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<pre style="margin: 0;">+<span id="LC514" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">should_log</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC515" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// early quit if our logger has loglevel below ourselves</span></span>
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516
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<pre style="margin: 0;"> <span id="LC516" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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517
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<pre style="margin: 0;"> <span id="LC517" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC501" class="line" lang="cpp"> <span class="n" style="color: #333;">_last_update</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">now</span><span class="p">;</span></span>
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518
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<pre style="margin: 0;">+<span id="LC518" class="line" lang="cpp"> <span class="n" style="color: #333;">duration_t</span> <span class="n" style="color: #333;">delta_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">now</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">_last_update</span><span class="p">;</span></span>
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519
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<pre style="margin: 0;">+<span id="LC519" class="line" lang="cpp"> <span class="n" style="color: #333;">status_line</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">trigger_print_status_lines</span><span class="p">();</span></span>
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520
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<pre style="margin: 0;">+<span id="LC520" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">delta_time</span> <span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">_mininterval</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC521" class="line" lang="cpp"> <span class="n" style="color: #333;">_last_update</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">now</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC522" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC503" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">buf</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC504" class="line" lang="cpp"> <span class="n" style="color: #333;">render_progress</span><span class="p">(</span><span class="n" style="color: #333;">now</span><span class="p">,</span> <span class="mi" style="color: #099;">60</span><span class="p">,</span> <span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC505" class="line" lang="cpp"> <span class="n" style="color: #333;">log</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC523" class="line" lang="cpp"> <span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="n" style="color: #333;">buf</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC524" class="line" lang="cpp"> <span class="n" style="color: #333;">base_progress</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">render_progress</span><span class="p">(</span><span class="n" style="color: #333;">now</span><span class="p">,</span> <span class="mi" style="color: #099;">60</span><span class="p">,</span> <span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC525" class="line" lang="cpp"> <span class="n" style="color: #333;">status_line</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">send_log_msg</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC526" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC527" class="line" lang="cpp"> <span class="p">}</span></span>
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528
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<pre style="margin: 0;"> <span id="LC528" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC508" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">update_messag</span>e</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">)</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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509
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<pre style="margin: 0;">-<span id="LC509" class="line" lang="cpp"> <span class="n" style="color: #333;">render_progress</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">clock_t</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">now</span><span class="p">(),</span> <span class="n" style="color: #333;">width</span><span class="p">,</span> <span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC529" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;"><span class="idiff left right">render_status_lin</span>e</span><span class="p">(</span><span class="n" style="color: #333;">fmt</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">memory_buffer</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">width</span><span class="p">)</span> <span class="k" style="font-weight: 600;">override</span> <span class="k" style="font-weight: 600;">final</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC530" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left">base_progress</span></span><span class="o" style="font-weight: 600;"><span class="idiff right">::</span></span><span class="n" style="color: #333;">render_progress</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">clock_t</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">now</span><span class="p">(),</span> <span class="n" style="color: #333;">width</span><span class="p">,</span> <span class="n" style="color: #333;">buf</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC531" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC532" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC533" class="line" lang="cpp"><span class="nl">private:</span></span>
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<li id="12cdcefc951303933149bd0ff07fd4c10aa06e6d">
<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#12cdcefc951303933149bd0ff07fd4c10aa06e6d"><strong>src/query_arb.cpp</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -264,9 +264,7 @@ query_arb::query_arb(const fs::path& arbfile)</td>
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<pre style="margin: 0;"> <span id="LC264" class="line" lang="cpp"></span>
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265
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265
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<pre style="margin: 0;"> <span id="LC265" class="line" lang="cpp"> <span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">info</span><span class="p">(</span><span class="s" style="color: #d14;">"Loading names map... (for {})"</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">filename</span><span class="p">);</span></span>
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266
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266
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<pre style="margin: 0;"> <span id="LC266" class="line" lang="cpp"></span>
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267
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="cpp"> <span class="n" style="color: #333;">logger_progress</span> <span class="n" style="color: #333;">q</span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="s" style="color: #d14;">"Scanning"</span><span class="p">,</span> <span class="n" style="color: #333;">spec_count</span><span class="p">);</span></span>
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268
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="cpp"></span>
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269
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="cpp"> <span class="n" style="color: #333;">Progress</span> <span class="n" style="color: #333;">p</span><span class="p">(</span><span class="s" style="color: #d14;">"Scanning"</span><span class="p">,</span> <span class="n" style="color: #333;">spec_count</span><span class="p">);</span></span>
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267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="cpp"> <span class="n" style="color: #333;">logger_progress</span> <span class="n" style="color: #333;">p</span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="s" style="color: #d14;">"Scanning"</span><span class="p">,</span> <span class="n" style="color: #333;">spec_count</span><span class="p">);</span></span>
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270
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268
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span> <span class="n" style="color: #333;">GBDATA</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">gbspec</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">GBT_first_species</span><span class="p">(</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">gbmain</span><span class="p">);</span></span>
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271
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269
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<pre style="margin: 0;"> <span id="LC269" class="line" lang="cpp"> <span class="n" style="color: #333;">gbspec</span> <span class="o" style="font-weight: 600;">!=</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">;</span> <span class="n" style="color: #333;">gbspec</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">GBT_next_species</span><span class="p">(</span><span class="n" style="color: #333;">gbspec</span><span class="p">))</span> <span class="p">{</span></span>
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272
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270
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="cpp"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">gbdata_cache</span><span class="p">[</span><span class="n" style="color: #333;">GBT_read_name</span><span class="p">(</span><span class="n" style="color: #333;">gbspec</span><span class="p">)]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">gbspec</span><span class="p">;</span></span>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#632c9f648ae596e4951b1610f7a71300c5e91870"><strong>src/search_filter.cpp</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -189,7 +189,7 @@ search_filter::search_filter()</td>
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189
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="cpp"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">arb</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">query_arb</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">getARBDB</span><span class="p">(</span><span class="n" style="color: #333;">opts</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">pt_database</span><span class="p">);</span></span>
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190
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="cpp"></span>
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191
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">opts</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">search_all</span><span class="p">)</span> <span class="p">{</span></span>
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192
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left">Progress</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">p</span></span><span class="p"><span class="idiff right">(</span></span><span class="s" style="color: #d14;">"Caching Sequences"</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">arb</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">getSeqCount</span><span class="p">());</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="cpp"> <span class="n" style="color: #333;"><span class="idiff left">logger_progress</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">p</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">logger</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff right"> </span><span class="s" style="color: #d14;">"Caching Sequences"</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">arb</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">getSeqCount</span><span class="p">());</span></span>
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193
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193
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="cpp"> <span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">string</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">names</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">arb</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">getSequenceNames</span><span class="p">();</span></span>
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194
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="n" style="color: #333;">string</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">names</span><span class="p">)</span> <span class="p">{</span></span>
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195
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="cpp"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">sequences</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">arb</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">getCseq</span><span class="p">(</span><span class="n" style="color: #333;">name</span><span class="p">));</span></span>
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<a href="https://salsa.debian.org/med-team/sina/-/compare/e313b6932046e54f575c06ad1de7058292b321bc...053aad3633182b6619a9d93cd52135455e0b7cc4#52c1b2a7c8e61412195308d7ad8a3e75870f6827"><strong>src/sina.cpp</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="396" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -396,7 +396,7 @@ int real_main(int argc, char** argv) {</td>
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396
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396
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<pre style="margin: 0;"> <span id="LC396" class="line" lang="cpp"> <span class="n" style="color: #333;">tbb</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">task_scheduler_init</span> <span class="n" style="color: #333;">init</span><span class="p">(</span><span class="n" style="color: #333;">vm</span><span class="p">[</span><span class="s" style="color: #d14;">"threads"</span><span class="p">].</span><span class="n" style="color: #333;">as</span><span class="o" style="font-weight: 600;"><</span><span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span><span class="o" style="font-weight: 600;">></span><span class="p">());</span></span>
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397
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397
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<pre style="margin: 0;"> <span id="LC397" class="line" lang="cpp"></span>
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398
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398
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<pre style="margin: 0;"> <span id="LC398" class="line" lang="cpp"> <span class="n" style="color: #333;">tf</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">graph</span> <span class="n" style="color: #333;">g</span><span class="p">;</span> <span class="c1" style="color: #998; font-style: italic;">// Main data flow graph (pipeline)</span></span>
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399
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<pre style="margin: 0;">-<span id="LC399" class="line" lang="cpp"> <span class="n" style="color: #333;">logger_progress</span> <span class="n" style="color: #333;">p</span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="s" style="color: #d14;">"Processing"</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="mi" style="color: #099;"><span class="idiff">0</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="nb" style="color: #0086b3;"><span class="idiff right">false</span></span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC399" class="line" lang="cpp"> <span class="n" style="color: #333;">logger_progress</span> <span class="n" style="color: #333;">p</span><span class="p">(</span><span class="n" style="color: #333;">logger</span><span class="p">,</span> <span class="s" style="color: #d14;">"Processing"</span><span class="p">);</span></span>
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400
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400
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<pre style="margin: 0;"> <span id="LC400" class="line" lang="cpp"></span>
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401
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401
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<pre style="margin: 0;"> <span id="LC401" class="line" lang="cpp"> <span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">unique_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">tf</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">graph_node</span><span class="o" style="font-weight: 600;">>></span> <span class="n" style="color: #333;">nodes</span><span class="p">;</span> <span class="c1" style="color: #998; font-style: italic;">// Nodes (for cleanup)</span></span>
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402
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402
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<pre style="margin: 0;"> <span id="LC402" class="line" lang="cpp"> <span class="n" style="color: #333;">tf</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">sender</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">tray</span><span class="o" style="font-weight: 600;">></span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">last_node</span><span class="p">;</span> <span class="c1" style="color: #998; font-style: italic;">// Last tray producing node</span></span>
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