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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/qiime">Debian Med / qiime</a>
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<h4>
Commits:
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<ul>
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<strong><a href="https://salsa.debian.org/med-team/qiime/-/commit/61b037d1ebbfd815b40b7d3518abde0742a905b8">61b037d1</a></strong>
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<span>by Steffen Möller</span>
<i>at 2020-06-08T22:48:50+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update TODO - pointing to deblur on salsa</pre>
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<h4>1 changed file:</h4>
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<a href="#d9d67e646e83973f5e1d6cd63fe8c9dffb33ebba">
debian/TODO
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<h4>Changes:</h4>
<li id="d9d67e646e83973f5e1d6cd63fe8c9dffb33ebba">
<a href="https://salsa.debian.org/med-team/qiime/-/commit/61b037d1ebbfd815b40b7d3518abde0742a905b8#d9d67e646e83973f5e1d6cd63fe8c9dffb33ebba"><strong>debian/TODO</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -18,11 +18,14 @@ ________________________</td>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Plugins already in the NEW QUEUE</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">________________________________</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> - q2-taxa</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">The work already started</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">________________________</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> - q2-taxa (D3-scale-chromatic, thenBy, natural-sort JavaScript dependencies)</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> - deblur - on salsa, waiting for update of sortmerna</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> - q2-alignment:</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> TODO: SINA (https://github.com/epruesse/SINA)</span>
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<td class="diff-line-num new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> https://salsa.debian.org/med-team/sina</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -34,7 +37,7 @@ ________________________</td>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext">The work NOT started yet</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext">________________________</span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> - q2-composition</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> - q2-composition<span class="idiff left right"> (https://github.com/qiime2/q2-composition)</span></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> - q2-sample-classifier (deps: q2-feature-table)</span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -59,3 +62,11 @@ ________________________</td>
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59
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62
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> - q2-quality-control (deps: q2-taxa)</span>
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<td class="diff-line-num old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
60
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<td class="diff-line-num new_line" data-linenumber="63" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
63
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
61
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<td class="diff-line-num new_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
64
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> - q2-fragment-insertion (only the first release)</span>
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<td class="diff-line-num new new_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> </span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"> - q2lint (https://github.com/qiime2/q2lint)</span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> - q2-shogun (https://github.com/qiime2/q2-shogun)</span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="plaintext"> TODO: Would need Shogun back in the archive, from where it was removed</span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext"> over the Python 2->3 transition</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext"> - q2cwl (https://github.com/qiime2/q2cwl)</span></pre>
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