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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-biopython">Debian Med / python-biopython</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/dcb8b9cf6de167ec4ec1bcf03098379eb9679d98">dcb8b9cf</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:10:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">implement makeblastdb -blastdb_version flag
this is to enable working around 32 bit limitations for some tests.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/8b2509a61de3cad49f70c7e1efb9f2c849b70575">8b2509a6</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:13:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">modified makeblastdb call in tests for use of v4
the move to v4 allows to execute tests on 32 bit architectures too,
otherwise execution of makeblastdb starves the address space, and
the database never gets built due to running out of memory.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/58a534fc5da77d3225b69dbc19b7c9ba624b7905">58a534fc</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:45:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">incremented changelog to refer to bug report
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/0c172baf964dd9652f78a95d5c6689f0117cb86c">0c172baf</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:47:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/375446ad06066586eea2fffe8db9a5bd0d4ced7c">375446ad</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:47:19+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.77+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/3c726c31c89d8563d7b23ae915ac03897ef9d276">3c726c31</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:47:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.77+dfsg'
Update to upstream version '1.77+dfsg'
with Debian dir 75ee8858254474c3b1ef5c5cbf374d8dd2bec816</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/6e0b60ee2106b380753aa8f3b96900fcf20e35ba">6e0b60ee</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T17:56:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">new upstream version
this was caught by routine-update.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/109cdc41d6309daa3da481945a74cec3d9f18cdb">109cdc41</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T18:17:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">removed patch not applying anymore
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/2202c0a722804532a06b03392e564b34398fb77e">2202c0a7</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T18:17:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove patch applied upstream
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/b6cd88a08b1b8426d38d80db2c923456f348f1e5">b6cd88a0</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T18:37:28+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rewrote patch implementing version option
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/adceea31e1251bf4bddee8b2e9791239fc26ce55">adceea31</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T19:25:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rewrote patch against tests for 32 bits workaround
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/4bd09eea1ae4010549a8a42a0347ab38698685d1">4bd09eea</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T20:09:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">removed unnecessary patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/1a60c9c7728de7aa8a384b04186dec8cb98f8cd9">1a60c9c7</a></strong>
<div>
<span>by Etienne Mollier</span>
<i>at 2020-06-11T20:26:12+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4>12 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#961d2007ddaacf60fb7db9dd5246cf601bc343ec">
.appveyor.yml
</a>
</li>
<li class="file-stats">
<a href="#3ac517dad11a750eb4733a0cf5eb375d247f3116">
.flake8
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#fb16db094d3c24440707b3f1095dd7cf60253835">
.travis-tox.ini
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#05777ad225b1353b06e31e8d8c13b30a58f09963">
Bio/Affy/CelFile.py
</a>
</li>
<li class="file-stats">
<a href="#d7754918e6821db6ffea065687599ec4f11a8e2d">
Bio/Align/AlignInfo.py
</a>
</li>
<li class="file-stats">
<a href="#313cec80666db065d312fd4fe37ed7c023e2f5a8">
Bio/Align/Applications/_ClustalOmega.py
</a>
</li>
<li class="file-stats">
<a href="#ebaf40087e9748f016de5a5c83e6b963ef884401">
Bio/Align/Applications/_Clustalw.py
</a>
</li>
<li class="file-stats">
<a href="#c93a329d432ed808d772bf2a7b264f5eee6dc401">
Bio/Align/Applications/_Dialign.py
</a>
</li>
<li class="file-stats">
<a href="#ec5f6f8affa43859a415ddebba8b438a4907e138">
Bio/Align/Applications/_MSAProbs.py
</a>
</li>
<li class="file-stats">
<a href="#b5656600de5cfe0a712aa87552322d82af6409f5">
Bio/Align/Applications/_Mafft.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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