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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/bppsuite">Debian Med / bppsuite</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/0885d25f1f4d813235587930f612380ab1f3c6eb">0885d25f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/b546d589402ec193a950b99a918232ada42e1a43">b546d589</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/3b97108e16724c5ce58aa52ddcc78a1dfc228671">3b97108e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Remove trailing whitespace in debian/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/f487a0e140af04fa7970ce6b6dec62c2a4f851e4">f487a0e1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Remove trailing whitespace in debian/copyright
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/173c0c9f4a8091af3a5bb4e0e79c8a6e9840762f">173c0c9f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/3e81169bcd97248e17a784d3b6b6bc23f916923b">3e81169b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/d015c6e6a8b3e13595108ba572d1ece2360056c5">d015c6e6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.
Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/1749c858b1298591456e643162363cb3b337a18b">1749c858</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/88f6fdb9028667b30931392c850cde610a3ffad7">88f6fdb9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refer to specific version of license GPL-2+.
Fixes: lintian: copyright-refers-to-symlink-license
See-also: https://lintian.debian.org/tags/copyright-refers-to-symlink-license.html
Fixes: lintian: copyright-refers-to-versionless-license-file
See-also: https://lintian.debian.org/tags/copyright-refers-to-versionless-license-file.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/52e6135a404ce8a0bc472fc5fa67769eb2b4e407">52e6135a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:22:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix day-of-week for changelog entry 0.3.0.
Fixes: lintian: debian-changelog-has-wrong-day-of-week
See-also: https://lintian.debian.org/tags/debian-changelog-has-wrong-day-of-week.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/342c2fd1c2dabe79013e814f5e0928a5e1fefb61">342c2fd1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T21:44:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Cleanup installation of manpages
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bppsuite/-/commit/c596cdd826b0d2afef62c53541ea9a60a5def6aa">c596cdd8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-12T22:06:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>7 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#080cbd3165a157684485f36679156f8b22c6af1d">
<span class="deleted-file">
−
debian/bppsuite.manpages
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">
−
debian/compat
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</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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</ul>
<h4>Changes:</h4>
<li id="080cbd3165a157684485f36679156f8b22c6af1d">
<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#080cbd3165a157684485f36679156f8b22c6af1d"><strong>debian/bppsuite.manpages</strong>
deleted
</a>
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1
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<td class="diff-line-num new_line old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">man/*.1</span></pre>
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<br>
</li>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
<hr>
<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">
<tr class="line_holder old" id="" style="line-height: 1.6;">
<td class="diff-line-num old old_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
1
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<td class="diff-line-num new_line old" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">bppsuite (2.4.1-2) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">bppsuite (2.4.1-2) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> [ Pranav Ballaney ]</span>
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3
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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> * Add reference data for autopkgtests</span>
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<td class="diff-line-num old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
4
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> * Install examples for bppsuite</span>
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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
5
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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> * Add autopkgtests</span>
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<td class="diff-line-num old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> * Install docs</span>
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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> * Standards-Version: 4.5.0 (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> * Remove trailing whitespace in debian/changelog (routine-update)</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> * Remove trailing whitespace in debian/copyright (routine-update)</span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> * Add salsa-ci file (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> * Trim trailing whitespace.</span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> Repository-Browse.</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> * Refer to specific version of license GPL-2+.</span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> * Fix day-of-week for changelog entry 0.3.0.</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> * Cleanup installation of manpages</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"></span>
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8
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> -- Pranav Ballaney <ballaneypranav@gmail.com> Fri, 12 Jun 2020 06:00:09 +0530</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext">bppsuite (2.4.1-1) unstable; urgency=medium</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -54,13 +71,13 @@ bppsuite (2.3.1-4) unstable; urgency=medium</td>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext">bppsuite (2.3.1-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext"> * Fixed linkage issue in x32 arch (second attempt)<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> * Fixed linkage issue in x32 arch (second attempt)</span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> -- Julien Dutheil <julien.dutheil@univ-montp2.fr> Wed, 19 Jul 2017 20:56:28 +0200</span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext">bppsuite (2.3.1-2) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext"> * Fixed linkage issue in x32 arch.<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> * Fixed linkage issue in x32 arch.</span>
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81
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> -- Julien Dutheil <julien.dutheil@univ-montp2.fr> Tue, 18 Jul 2017 21:47:05 +0200</span>
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83
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -158,5 +175,4 @@ bppsuite (0.3.0) unstable; urgency=low</td>
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175
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> * Initial release</span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"></span>
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161
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> -- Julien Dutheil <jdutheil@birc.au.dk> Fri, 25 Sep 2008 14:28:21 +0200</span>
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"></span></pre>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="plaintext"> -- Julien Dutheil <jdutheil@birc.au.dk> Thu, 25 Sep 2008 14:28:21 +0200</span></pre>
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<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong>
deleted
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">11</span></pre>
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<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,15 +4,16 @@ Uploaders: Julien Dutheil <julien.dutheil@univ-montp2.fr>,</td>
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4
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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6
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right"> (>= 11~</span>),</span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper<span class="idiff left right">-compat (= 13</span>),</span>
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8
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> cmake,</span>
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9
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> texinfo,</span>
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10
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> libbpp-phyl-dev (>= 2.4.0),</span>
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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
11
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> libbpp-popgen-dev (>= 2.4.0)</span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">2</span>.0</span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5</span>.0</span>
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13
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/bppsuite</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/bppsuite.git</span>
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15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Package: bppsuite</span>
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18
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Architecture: any</span>
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<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -141,7 +141,7 @@ License: CeCILL</td>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> The purpose of the Agreement is the grant by the Licensor to the</span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> Licensee of a non-exclusive, transferable and worldwide license for the</span>
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="plaintext"> Software as set forth in Article 5 hereinafter for the whole term of the<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext"> Software as set forth in Article 5 hereinafter for the whole term of the</span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> protection granted by the rights over said Software.</span>
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> .</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -161,7 +161,7 @@ License: CeCILL</td>
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<pre style="margin: 0;"> <span id="LC161" class="line" lang="plaintext"> characteristics of the Software, to the limited warranty, and to the</span>
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<pre style="margin: 0;"> <span id="LC162" class="line" lang="plaintext"> fact that its use is restricted to experienced users has been provided</span>
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<pre style="margin: 0;"> <span id="LC163" class="line" lang="plaintext"> to the Licensee prior to its acceptance as set forth in Article 3.1</span>
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="plaintext"> hereinabove, and the Licensee hereby acknowledges that it has read and<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="plaintext"> hereinabove, and the Licensee hereby acknowledges that it has read and</span>
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<pre style="margin: 0;"> <span id="LC165" class="line" lang="plaintext"> understood it.</span>
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<pre style="margin: 0;"> <span id="LC166" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> .</span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="409" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -409,7 +409,7 @@ License: CeCILL</td>
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<pre style="margin: 0;"> <span id="LC409" class="line" lang="plaintext"> 9.3 The Licensee acknowledges that the Software is supplied "as is" by</span>
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410
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="plaintext"> the Licensor without any other express or tacit warranty, other than</span>
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411
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411
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<pre style="margin: 0;"> <span id="LC411" class="line" lang="plaintext"> that provided for in Article 9.2 and, in particular, without any warranty</span>
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412
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<pre style="margin: 0;">-<span id="LC412" class="line" lang="plaintext"> as to its commercial value, its secured, safe, innovative or relevant<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC412" class="line" lang="plaintext"> as to its commercial value, its secured, safe, innovative or relevant</span>
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<pre style="margin: 0;"> <span id="LC413" class="line" lang="plaintext"> nature.</span>
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414
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<pre style="margin: 0;"> <span id="LC414" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="plaintext"> Specifically, the Licensor does not warrant that the Software is free</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="524" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -524,7 +524,7 @@ License: GPL-2+</td>
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524
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<pre style="margin: 0;"> <span id="LC524" class="line" lang="plaintext"> it under the terms of the GNU General Public License as published by</span>
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525
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<pre style="margin: 0;"> <span id="LC525" class="line" lang="plaintext"> the Free Software Foundation; either version 2 of the License, or</span>
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526
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<pre style="margin: 0;"> <span id="LC526" class="line" lang="plaintext"> (at your option) any later version.</span>
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527
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<pre style="margin: 0;">-<span id="LC527" class="line" lang="plaintext"> .<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC527" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC528" class="line" lang="plaintext"> This package is distributed in the hope that it will be useful,</span>
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<pre style="margin: 0;"> <span id="LC529" class="line" lang="plaintext"> but WITHOUT ANY WARRANTY; without even the implied warranty of</span>
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<pre style="margin: 0;"> <span id="LC530" class="line" lang="plaintext"> MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="535" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -535,4 +535,4 @@ License: GPL-2+</td>
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<pre style="margin: 0;"> <span id="LC535" class="line" lang="plaintext"> Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA</span>
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<pre style="margin: 0;"> <span id="LC536" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC537" class="line" lang="plaintext"> On Debian systems, the complete text of the GNU General</span>
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<pre style="margin: 0;">-<span id="LC538" class="line" lang="plaintext"> Public License can be found in `/usr/share/common-licenses/GPL'.</span></pre>
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<pre style="margin: 0;">+<span id="LC538" class="line" lang="plaintext"> Public License can be found in `/usr/share/common-licenses/GPL<span class="idiff left right">-2</span>'.</span></pre>
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<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/bppsuite/-/compare/06f67230abd4a3d953fc4f561fb3e97c8d1961d5...c596cdd826b0d2afef62c53541ea9a60a5def6aa#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/BioPP/bppsuite/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/BioPP/bppsuite/issues/new</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> - Name: OMICtools</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Entry: OMICS_15696</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,3 +7,5 @@ Registry:</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> Entry: NA</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> - Name: SciCrunch</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> Entry: NA</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">Repository: https://github.com/BioPP/bppsuite.git</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">Repository-Browse: https://github.com/BioPP/bppsuite</span></pre>
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