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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/nanofilt">Debian Med / nanofilt</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanofilt/-/commit/f94882884c9523aa8dc6d46239183508f0f0db5d">f9488288</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-23T22:12:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Remove trailing whitespace in debian/control
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanofilt/-/commit/a5ebb4a44c793668439ba179a899d90c61bae67c">a5ebb4a4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-23T22:12:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanofilt/-/commit/90b6abb6083513dcc7197cc756817a57daa329c0">90b6abb6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-23T22:12:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.
Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanofilt/-/commit/b16c02ec38040bf57e54166dea3554a24853b6c2">b16c02ec</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-23T22:12:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanofilt/-/commit/2d95144b4ec37682d03761435e4db328fe2eaa1c">2d95144b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-06-23T22:15:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
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<h4>4 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/nanofilt/-/compare/600dc3cf6d26c54d8cc2c17a731194eccee2fe74...2d95144b4ec37682d03761435e4db328fe2eaa1c#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">nanofilt (2.6.0-2) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Remove trailing whitespace in debian/control (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Trim trailing whitespace.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> Repository-Browse.</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Tue, 23 Jun 2020 22:12:42 +0200</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">nanofilt (2.6.0-1) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> * Initial release (Closes: #962977)</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/nanofilt/-/compare/600dc3cf6d26c54d8cc2c17a731194eccee2fe74...2d95144b4ec37682d03761435e4db328fe2eaa1c#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,6 +14,7 @@ Standards-Version: 4.5.0</td>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/nanofilt</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/nanofilt.git</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">Homepage: https://github.com/wdecoster/nanofilt</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Package: nanofilt</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Architecture: any</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,8 +29,8 @@ Description: filtering and trimming of long read sequencing data</td>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> Reads from stdin, writes to stdout. Optionally reads directly from an</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> uncompressed file specified on the command line.</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> Intended to be used:<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> Intended to be used:</span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> 1. directly after fastq extraction.<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> 2. prior to mapping.<span class="idiff left right"> </span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> 1. directly after fastq extraction.</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> 2. prior to mapping.</span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> 3. in a stream between extraction and mapping.</span></pre>
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<a href="https://salsa.debian.org/med-team/nanofilt/-/compare/600dc3cf6d26c54d8cc2c17a731194eccee2fe74...2d95144b4ec37682d03761435e4db328fe2eaa1c#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -13,4 +13,3 @@ export PYBUILD_TEST_ARGS=-k-pytest</td>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">%:</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> dh $@ --with python3 --buildsystem=pybuild</span></pre>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/nanofilt/-/compare/600dc3cf6d26c54d8cc2c17a731194eccee2fe74...2d95144b4ec37682d03761435e4db328fe2eaa1c#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/wdecoster/nanofilt/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/wdecoster/nanofilt/issues/new</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Reference:</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Author: Wouter De Coster, Svenn D'Hert, Darrin T. Schultz, Christine Van Broeckhoven</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Title: "NanoPack: visualizing and processing long-read sequencing data"</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,3 +11,5 @@ Reference:</td>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> - Name: conda:bioconda</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> Entry: nanofilt</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext">Repository: https://github.com/wdecoster/nanofilt.git</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">Repository-Browse: https://github.com/wdecoster/nanofilt</span></pre>
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