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<h3>
Shayan Doust pushed to branch master
at <a href="https://salsa.debian.org/med-team/mecat2">Debian Med / mecat2</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/mecat2/-/commit/f37b0efcacb2bcb0381e2e4bd8d7f71270f54459">f37b0efc</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2020-06-30T16:22:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "More files to exclude"
This reverts commit 7d355cd59f4aa20a7a96e23f8d903216155a6ef3.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mecat2/-/commit/96fd592d18980cd434c4c012a2cea97acf5b709f">96fd592d</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2020-06-30T16:23:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "New upstream version 0.0+git20200428.f54c542+ds"
This reverts commit de154ea46d153d778bb648ebc4be59485de72205.
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#2e4d533ed91ff2bdcbdda6e11ae04b4344247f05">
debian/patches/modify_makefiles.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#c618a9ce01b07e6dd43e9e39e2eab42cde7a09a0">
<span class="new-file">
+
src/fsa/argument_parser.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#922f95441fcae3f78d8f75f5b4542606b6d9b638">
<span class="new-file">
+
src/fsa/argument_parser.hpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#144776fc507d5cc39556afa0d0c4143708c8b246">
<span class="new-file">
+
src/fsa/assemble.mk
</span>
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</li>
<li class="file-stats">
<a href="#d64d14109e5d56c8b0a6d15a809aebec18b41c06">
<span class="new-file">
+
src/fsa/assembly.cpp
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</li>
<li class="file-stats">
<a href="#4a2bed4a05f537f84abd25f116ce68af9ab1d1ab">
<span class="new-file">
+
src/fsa/assembly.hpp
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</li>
<li class="file-stats">
<a href="#2c05ac59f374495f3339e220b5f0f49ecb0eb92a">
<span class="new-file">
+
src/fsa/bridge.mk
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</li>
<li class="file-stats">
<a href="#15c7d48886b6ae36d0542f6c51ba34004513d2fd">
<span class="new-file">
+
src/fsa/contig_bridge.cpp
</span>
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<li class="file-stats">
<a href="#65307db2e716b1eb1f5678f00e9b89979049fc44">
<span class="new-file">
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src/fsa/contig_bridge.hpp
</span>
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<li class="file-stats">
<a href="#6c2d752dd0d7e9a741e6cbfcb0835007e6c23cb8">
<span class="new-file">
+
src/fsa/contig_graph.cpp
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<li class="file-stats">
<a href="#4cff8a136aa285e435a09414174c56931f3359ca">
<span class="new-file">
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src/fsa/contig_graph.hpp
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<li class="file-stats">
<a href="#023c8321f401e58dca214fea6b9ee844c2093457">
<span class="new-file">
+
src/fsa/contig_link.cpp
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<li class="file-stats">
<a href="#1b2f696f33891e32fc45cde6c7f70744ad1c8d0d">
<span class="new-file">
+
src/fsa/contig_link.hpp
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</a>
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<li class="file-stats">
<a href="#8e96c699a020fe631cbae3dc2122fe9daefd91b8">
<span class="new-file">
+
src/fsa/contig_link_store.cpp
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</a>
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<li class="file-stats">
<a href="#1fdb521f5699425133a46085d2154bc213086d17">
<span class="new-file">
+
src/fsa/contig_link_store.hpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#5e5f0a4e288459b3b3c10cdde362a3b2b1076d08">
<span class="new-file">
+
src/fsa/fasta_reader.cpp
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</a>
</li>
<li class="file-stats">
<a href="#aadab3195c1e01e072e75c5241ea645e43af9c03">
<span class="new-file">
+
src/fsa/fasta_reader.hpp
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<li class="file-stats">
<a href="#9548400d1fc43856c585bdc7ca737c4e950c8b85">
<span class="new-file">
+
src/fsa/fastq_reader.cpp
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<li class="file-stats">
<a href="#df9751f9632bb914810eee622f25427098a31ce4">
<span class="new-file">
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src/fsa/fastq_reader.hpp
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<li class="file-stats">
<a href="#d0c7c9bc05d78a6cad55fab36411efcb0936094a">
<span class="new-file">
+
src/fsa/filter.mk
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<li class="file-stats">
<a href="#13924f048a44e301ced2997a10a320dc429bcc9f">
<span class="new-file">
+
src/fsa/fsa.mk
</span>
</a>
</li>
<li class="file-stats">
<a href="#ea1bd6d0d34864d35e9db5d753e881115a4b872f">
<span class="new-file">
+
src/fsa/fsa_assemble.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f9aa10a4ab0778332c2ac178b34e06f57b621b3a">
<span class="new-file">
+
src/fsa/fsa_ctg_bridge.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f7c47f3f65acb0485befffe3f8d3637145de2b45">
<span class="new-file">
+
src/fsa/fsa_ol_compare.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#7dbf41ec20e549b7f964b4305b34ca61378b7154">
<span class="new-file">
+
src/fsa/fsa_ol_filter.cpp
</span>
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</li>
<li class="file-stats">
<a href="#b673ea384a0ef29950a2aec7c076d281e67f8002">
<span class="new-file">
+
src/fsa/fsa_ol_show.cpp
</span>
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</li>
<li class="file-stats">
<a href="#27bf7882f72ad5db29717ffee7a258b1730b2144">
<span class="new-file">
+
src/fsa/fsa_ol_stat.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#14bdf3ad1885bf9dfa88f0750ff811d4adb62512">
<span class="new-file">
+
src/fsa/fsa_rd_stat.cpp
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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