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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fbcf7dc6c0bd83258b12ca9758d50d787a184644">fbcf7dc6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-08T13:43:57+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fbcf7dc6c0bd83258b12ca9758d50d787a184644#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Wed, 08 Jul 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Wed, 08 Jul 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   |     Tasks                                           |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    18<span class="idiff left right">9</span> | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |     9<span class="idiff left right">6</span> | {covid-19,imaging,practice}                         | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">4</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    18<span class="idiff left right">8</span> | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |     9<span class="idiff left right">5</span> | {covid-19,imaging,practice}                         | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">5</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> orthanc-wsi                   |     44 | {his,practice,covid-19,laboratory,imaging,oncology} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> htsjdk                        |     30 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> htsjdk                        |     32 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> dcm2niix                      |     24 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dicom3tools                   |     24 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> dcm2niix                      |     23 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope                    |     23 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> gnumed-server                 |     18 | {practice,covid-19}                                 | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> ngs-sdk                       |     18 | {bio-dev}                                           | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,31 +20,31 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> jebl2                         |     12 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> minc-tools                    |     12 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> vtk-dicom                     |     11 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> adun.app                      |      9 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> biosig4c++                    |      9 | {physics,imaging}                                   | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> libdivsufsort                 |      9 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> ngs-sdk                       |      9 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> openslide                     |      9 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> adun.app                      |      8 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> dicompyler                    |      8 | {oncology}                                          | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> king                          |      8 | {imaging,typesetting}                               | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> lagan                         |      8 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> melting                       |      8 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> ngs-sdk                       |      8 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> plastimatch                   |      8 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> psychopy                      |      8 | {psychology}                                        | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> libminc                       |      7 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> orthanc-webviewer             |      7 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> stacks                        |      7 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> treeview                      |      7 | {bio-phylogeny,bio}                                 | </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> biojava-live                  |      6 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> ea-utils                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> king-probe                    |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> librg-utils-perl              |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> orthanc-dicomweb              |      6 | {imaging,covid-19}                                  | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> paraclu                       |      6 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> anfo                          |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> biojava-live                  |      5 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> biomaj3-cli                   |      5 | {cloud}                                             | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> fastlink                      |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> getdata                       |      5 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> king-probe                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> mlv-smile                     |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> ncbi-seg                      |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> obitools                      |      5 | {bio}                                               | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -57,6 +57,8 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> biomaj3-daemon                |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> elastix                       |      4 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> gatb-core                     |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> mauve-aligner                 |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> mhap                          |      4 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> mipe                          |      4 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> neobio                        |      4 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> orthanc-postgresql            |      4 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> bandage                       |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> brig                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> busco                         |      3 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext"> daligner                      |      3 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> ecopcr                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> edtsurf                       |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> embassy-domainatrix           |      3 | {cloud,bio}                                         | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> ipig                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> libncl                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> librdp-taxonomy-tree-java     |      3 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="plaintext"> mauve-aligner                 |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext"> mhap                          |      3 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> microbegps                    |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> mrs                           |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> multiqc                       |      3 | {bio,covid-19}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -111,14 +112,15 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> beast2-mcmc                   |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> beast-mcmc                    |      2 | {bio-phylogeny,bio}                                 | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> bio-rainbow                   |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext"> biosig4c++                    |      2 | {physics,imaging-dev}                               | </span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> bio-tradis                    |      2 | {bio-dev,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> bitseq                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext"> blasr                         |      2 | {bio,bio-ngs}                                       | </span>
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> blimps                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> canu                          |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> centrifuge                    |      2 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> clonalframeml                 |      2 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> clonalorigin                  |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="plaintext"> daligner                      |      2 | {bio-ngs,bio}                                       | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> dascrubber                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> dazzdb                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="plaintext"> delly                         |      2 | {bio,covid-19}                                      | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -139,8 +141,8 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> metaphlan2                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> murasaki                      |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> ncbi-vdb                      |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> oscar                         |      2 | {practice,tools,data}                               | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> patman                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"> pbdagcon                      |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> phast                         |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> phybin                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC148" class="line" lang="plaintext"> prime-phylo                   |      2 | {bio,cloud}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -171,7 +173,6 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> sweed                         |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> yaha                          |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="plaintext"> biosig4c++                    |      1 | {physics,imaging-dev}                               | </span>
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> blasr                         |      1 | {bio,bio-ngs}                                       | </span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> cat-bat                       |      1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> ctn                           |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="plaintext"> cufflinks                     |      1 | {cloud,bio}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -185,14 +186,15 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> opencfu                       |      1 | {laboratory}                                        | </span>
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<td class="diff-line-num new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> openslide                     |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> opensurgsim                   |      1 | {imaging-dev}                                       | </span>
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<td class="diff-line-num new new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="plaintext"> oscar                         |      1 | {practice,tools,data}                               | </span>
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<td class="diff-line-num new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> pbcopper                      |      1 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext"> pbdagcon                      |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> phipack                       |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> plasmidseeker                 |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> python-scitrack               |      1 | {covid-19}                                          | </span>
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> q2templates                   |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="plaintext"> rambo-k                       |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> relion                        |      1 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="plaintext"> stringtie                     |      1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> thesias                       |      1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> trace2dbest                   |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> velvetoptimiser               |      1 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -254,8 +256,8 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC256" class="line" lang="plaintext"> pilercr                       |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC257" class="line" lang="plaintext"> python-py2bit                 |      0 | {bio,bio-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC258" class="line" lang="plaintext"> quicktree                     |      0 | {bio,covid-19,bio-phylogeny}                        | </span>
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext"> relion                        |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC259" class="line" lang="plaintext"> relion                        |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="plaintext"> relion                        |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC261" class="line" lang="plaintext"> sambamba                      |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC262" class="line" lang="plaintext"> sbmltoolbox                   |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC263" class="line" lang="plaintext"> seq-gen                       |      0 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -265,7 +267,6 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC267" class="line" lang="plaintext"> smrtanalysis                  |      0 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="plaintext"> spaln                         |      0 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC269" class="line" lang="plaintext"> srf                           |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="plaintext"> stringtie                     |      0 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="plaintext"> tophat-recondition            |      0 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC271" class="line" lang="plaintext"> varna                         |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC272" class="line" lang="plaintext"> varscan                       |      0 | {covid-19,bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -274,5 +275,5 @@ Last-Update: Wed, 08 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC275" class="line" lang="plaintext"> pycoqc                        |     -1 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="plaintext"> shovill                       |     -1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="plaintext"> yanagiba                      |     -1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;">-<span id="LC277" class="line" lang="plaintext">(30<span class="idiff left right">1</span> rows)</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="plaintext">(30<span class="idiff left right">2</span> rows)</span>
</pre>
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<pre style="margin: 0;"> <span id="LC279" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fbcf7dc6c0bd83258b12ca9758d50d787a184644#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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