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GitLab
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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/salmon">Debian Med / salmon</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/salmon/-/commit/bb548091d607e4af535979bae5062daa2a92ae1b">bb548091</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-07-16T13:44:30+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">refresh pufferfish
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/salmon/-/commit/432a1944beaa0b5f28f73c99d669d06e63a20672">432a1944</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-07-16T13:54:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">release 1.3.0+ds1-1
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#bcfe0a1b71c7c9f36fc79defcbb40a9f1a7da6df">
debian/external/install/include/pufferfish/BooPHF.hpp
</a>
</li>
<li class="file-stats">
<a href="#70ed5f27a2a629523b91978c93d38356027efe89">
debian/external/install/include/pufferfish/CanonicalKmer.hpp
</a>
</li>
<li class="file-stats">
<a href="#e5a314449c9b05b7ecfcce54126999117f432fd6">
debian/external/install/include/pufferfish/Kmer.hpp
</a>
</li>
<li class="file-stats">
<a href="#1a2789cb2dd047b9cb614166f5144b08f9d990f6">
debian/external/install/include/pufferfish/MemChainer.hpp
</a>
</li>
<li class="file-stats">
<a href="#75baab7aa47a40894b44385b6d45ae3c60758186">
debian/external/install/include/pufferfish/MemCollector.hpp
</a>
</li>
<li class="file-stats">
<a href="#b70f29bec9ee4ebd941dfb150d7fe71f72e5c949">
debian/external/install/include/pufferfish/ProgOpts.hpp
</a>
</li>
<li class="file-stats">
<a href="#50ad953c201a98ca26bfcf343493d4c3cacc277b">
debian/external/install/include/pufferfish/PuffAligner.hpp
</a>
</li>
<li class="file-stats">
<a href="#cd6699e636d511b2977fe127b9572965f1242a58">
debian/external/install/include/pufferfish/PufferfishBaseIndex.hpp
</a>
</li>
<li class="file-stats">
<a href="#1589ccc60721ea52afff5156011698d5b7c9998d">
debian/external/install/include/pufferfish/PufferfishIndex.hpp
</a>
</li>
<li class="file-stats">
<a href="#58a2a678799fe197a4c8f0453c6b6a6546def090">
debian/external/install/include/pufferfish/PufferfishLossyIndex.hpp
</a>
</li>
<li class="file-stats">
<a href="#20c28bf7990d3d2079eb0fd597fe557d3035c53f">
debian/external/install/include/pufferfish/PufferfishSparseIndex.hpp
</a>
</li>
<li class="file-stats">
<a href="#90015bf59e5028c2f96879da350068ff0a9b91d9">
debian/external/install/include/pufferfish/SAMWriter.hpp
</a>
</li>
<li class="file-stats">
<a href="#6600660d352cebeb878afaaf3d918322c603f020">
debian/external/install/include/pufferfish/Util.hpp
</a>
</li>
<li class="file-stats">
<a href="#02741376b8b2a90f6b00268487144ef5d1cbd34d">
debian/external/install/include/pufferfish/compact_vector/compact_vector.hpp
</a>
</li>
<li class="file-stats">
<a href="#9a07573a884273af7ab2c4bf6c05e65ee66dc551">
debian/external/install/include/pufferfish/ksw2pp/KSW2Aligner.hpp
</a>
</li>
<li class="file-stats">
<a href="#b7f95fd1eff65a02e1d1293a99e5816f17770a30">
debian/external/install/include/pufferfish/ksw2pp/ksw2.h
</a>
</li>
<li class="file-stats">
<a href="#e4cb76eb9609d6f403a48db273c4b8f4c5b2ceb7">
debian/external/install/include/pufferfish/sparsepp/spp.h
</a>
</li>
<li class="file-stats">
<a href="#4b7353194493106f5de9754ee1195b5aa83685ec">
debian/external/install/include/pufferfish/sparsepp/spp_utils.h
</a>
</li>
<li class="file-stats">
<a href="#bab0168e08feaed4f313be44186d935586cb504a">
debian/external/pufferfish/CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#c6ed0a8fc2f1a73d271c09a5598d5bb5b682c785">
debian/external/pufferfish/external/twopaco/graphdump/compact_vector/compact_vector.hpp
</a>
</li>
<li class="file-stats">
<a href="#7c4e62696efaff474047a48ca017b973c4e6f36f">
debian/external/pufferfish/external/twopaco/graphdump/graphdumpBinaryWriter.hpp
</a>
</li>
<li class="file-stats">
<a href="#41690380d8a0af25bb3ef9ee5b0cc50b71d314c0">
debian/external/pufferfish/include/BooPHF.hpp
</a>
</li>
<li class="file-stats">
<a href="#dd793c40d8827dbc68589bb984e456a9754ee838">
debian/external/pufferfish/include/CanonicalKmer.hpp
</a>
</li>
<li class="file-stats">
<a href="#9d1ba3864e26523134bfbea66e83a1601e675f1b">
debian/external/pufferfish/include/Kmer.hpp
</a>
</li>
<li class="file-stats">
<a href="#0ebfbc72427573245c33a957b89349d5bbbac588">
debian/external/pufferfish/include/MemChainer.hpp
</a>
</li>
<li class="file-stats">
<a href="#ee160437f6cab1186771c4db1c30ba8db6eff232">
debian/external/pufferfish/include/MemCollector.hpp
</a>
</li>
<li class="file-stats">
<a href="#8a7be6947120fe5eb6688d5f7dd7fde4686b7844">
debian/external/pufferfish/include/ProgOpts.hpp
</a>
</li>
<li class="file-stats">
<a href="#28eda7f6019800a19e99ced2fcd6f6e6957d6108">
debian/external/pufferfish/include/PuffAligner.hpp
</a>
</li>
<li class="file-stats">
<a href="#98ebb2d8f11ff3391a198fa5b631ea9280d03a17">
debian/external/pufferfish/include/PufferfishBaseIndex.hpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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