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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/254f0d17977f242024bb2eb2b977475950997d30">254f0d17</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-21T13:44:10+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/254f0d17977f242024bb2eb2b977475950997d30#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 21 Jul 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 21 Jul 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   |     Tasks                                           |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    171 | {<span class="idiff left right">covid-19,imaging</span>}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |     <span class="idiff left right">89 | {covid-19,imaging,practice</span>}                         | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi                   |     4<span class="idiff left right">2 | {his,practice,covid-19,laboratory,imaging</span>,oncology} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">1</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    171 | {<span class="idiff left right">imaging,covid-19</span>}                                  | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |     <span class="idiff left right">90 | {practice,covid-19,imaging</span>}                         | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi                   |     4<span class="idiff left right">3 | {his,laboratory,covid-19,imaging,practice</span>,oncology} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm                          |     4<span class="idiff left right">0</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> htsjdk                        |     30 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools                   |     23 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dcm2niix                      |     22 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> dicomscope                    |     <span class="idiff left right">19</span> | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> gnumed-server                 |     18 | {<span class="idiff left right">practice,covid-19</span>}                                 | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> dicomscope                    |     <span class="idiff left right">21</span> | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> gnumed-server                 |     18 | {<span class="idiff left right">covid-19,practice</span>}                                 | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> gdcm                          |     15 | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> ngs-sdk                       |     15 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> gdcm                          |     13 | {imaging-dev}                                       | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,30 +21,30 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> pixelmed                      |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> adun.app                      |      9 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> lagan                         |      9 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> melting                       |      9 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> minc-tools                    |      9 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> psychopy                      |      9 | {psychology}                                        | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> vtk-dicom                     |      9 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> melting                       |      8 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> orthanc-webviewer             |      8 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> dicompyler                    |      7 | {oncology}                                          | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> king                          |      7 | {<span class="idiff left right">imaging,typesett</span>ing}                               | </span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> king                          |      7 | {<span class="idiff left right">typesetting,imag</span>ing}                               | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> libdivsufsort                 |      7 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> openslide                     |      7 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> orthanc-dicomweb              |      7 | {<span class="idiff left right">imaging,covid-19</span>}                                  | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> orthanc-dicomweb              |      7 | {<span class="idiff left right">covid-19,imaging</span>}                                  | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> plastimatch                   |      7 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> treeview                      |      7 | {bio<span class="idiff left right">-phylogeny,bio</span>}                                 | </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> treeview                      |      7 | {bio<span class="idiff left right">,bio-phylogeny</span>}                                 | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> bart-view                     |      6 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> biojava-live                  |      6 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> biomaj3-cli                   |      6 | {cloud}                                             | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> biosig4c++                    |      6 | {physics,imaging}                                   | </span>
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<td class="diff-line-num new_line old" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> ea-utils                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> libminc                       |      6 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> obitools                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> orthanc-mysql                 |      6 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> paraclu                       |      6 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> paraclu                       |      6 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<td class="diff-line-num new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> biomaj3-daemon                |      5 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> ea-utils                      |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> elastix                       |      5 | {imaging}                                           | </span>
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<td class="diff-line-num new_line old" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> fastlink                      |      5 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<td class="diff-line-num new new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> fastlink                      |      5 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> getdata                       |      5 | {bio}                                               | </span>
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<td class="diff-line-num new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> librg-utils-perl              |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> mlv-smile                     |      5 | {bio,cloud}                                         | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -54,9 +54,9 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> rdp-alignment                 |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> rdp-readseq                   |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> sibsim4                       |      5 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext"> sigma-align                   |      5 | {bio<span class="idiff left right">-phylogeny,cloud,bio</span>}                           | </span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> sigma-align                   |      5 | {bio<span class="idiff left right">,cloud,bio-phylogeny</span>}                           | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> zalign                        |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> anfo                          |      4 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> anfo                          |      4 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> gatb-core                     |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> king-probe                    |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> mauve-aligner                 |      4 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -74,13 +74,13 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> alter-sequence-alignment      |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> bandage                       |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> brig                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="plaintext"> busco                         |      3 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> daligner                      |      3 | {bio<span class="idiff left right">-ngs,bio</span>}                                       | </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> busco                         |      3 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> daligner                      |      3 | {bio<span class="idiff left right">,bio-ngs</span>}                                       | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> ecopcr                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> edtsurf                       |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> embassy-domainatrix           |      3 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> embassy-domalign              |      3 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> embassy-domsearch             |      3 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> embassy-domsearch             |      3 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> ipig                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> libncl                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> librdp-taxonomy-tree-java     |      3 | {bio-dev}                                           | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -88,39 +88,39 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> microbegps                    |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> multiqc                       |      3 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> openslide                     |      3 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> oscar                         |      3 | {<span class="idiff left right">practice,tools,data</span>}                               | </span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> oscar                         |      3 | {<span class="idiff left right">data,practice,tools</span>}                               | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> perm                          |      3 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> predictprotein                |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> proalign                      |      3 | {bio<span class="idiff left right">-phylogeny,bio</span>}                                 | </span>
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext"> probabel                      |      3 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext"> proalign                      |      3 | {bio<span class="idiff left right">,bio-phylogeny</span>}                                 | </span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext"> probabel                      |      3 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> rdp-classifier                |      3 | {bio}                                               | </span>
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97
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<td class="diff-line-num new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> relion                        |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
98
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<td class="diff-line-num new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
98
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> runcircos-gui                 |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
99
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<td class="diff-line-num new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
99
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> saint                         |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
100
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="plaintext"> salmon                        |      3 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
101
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<td class="diff-line-num new_line old" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="plaintext"> seqmagick                     |      3 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="100" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="plaintext"> salmon                        |      3 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> seqmagick                     |      3 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
102
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<td class="diff-line-num new_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
102
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> squizz                        |      3 | {bio,cloud}                                         | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
103
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103
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> staden                        |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
104
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<td class="diff-line-num new_line old" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> tnseq-transit                 |      3 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext"> tnseq-transit                 |      3 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
105
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105
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> tracetuner                    |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
106
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106
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> tvc                           |      3 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
107
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<td class="diff-line-num new_line old" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext"> ampliconnoise                 |      2 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
108
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<td class="diff-line-num new_line old" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="plaintext"> arden                         |      2 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext"> ampliconnoise                 |      2 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext"> arden                         |      2 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
109
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<td class="diff-line-num new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
109
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> assemblytics                  |      2 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
110
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<td class="diff-line-num new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
110
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> baitfisher                    |      2 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
111
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<td class="diff-line-num new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
111
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> beast2-mcmc                   |      2 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
112
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="plaintext"> beast-mcmc                    |      2 | {bio<span class="idiff left right">-phylogeny,bio</span>}                                 | </span>
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="plaintext"> beast-mcmc                    |      2 | {bio<span class="idiff left right">,bio-phylogeny</span>}                                 | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> bio-rainbow                   |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext"> bio-tradis                    |      2 | {bio<span class="idiff left right">-dev,bio</span>}                                       | </span>
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext"> bio-tradis                    |      2 | {bio<span class="idiff left right">,bio-dev</span>}                                       | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> bitseq                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> blasr                         |      2 | {bio<span class="idiff left right">,bio-ngs</span>}                                       | </span>
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext"> blasr                         |      2 | {bio<span class="idiff left right">-ngs,bio</span>}                                       | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> canu                          |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="plaintext"> centrifuge                    |      2 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext"> centrifuge                    |      2 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> clonalframeml                 |      2 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> clonalorigin                  |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> dascrubber                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> dazzdb                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="plaintext"> delly                         |      2 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext"> delly                         |      2 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> dindel                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> estscan                       |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="plaintext"> fastml                        |      2 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -142,8 +142,8 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> phast                         |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> phybin                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> placnet                       |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext"> prime-phylo                   |      2 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="plaintext"> prottest                      |      2 | {bio<span class="idiff left right">-phylogeny,bio</span>}                                 | </span>
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"> prime-phylo                   |      2 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext"> prottest                      |      2 | {bio<span class="idiff left right">,bio-phylogeny</span>}                                 | </span>
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> pscan-chip                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC148" class="line" lang="plaintext"> pscan-tfbs                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> qcumber                       |      2 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -170,9 +170,9 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="plaintext"> acedb                         |      1 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> biosig4c++                    |      1 | {physics,imaging-dev}                               | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> blimps                        |      1 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"> cat-bat                       |      1 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="plaintext"> cat-bat                       |      1 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> ctn                           |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext"> embassy-phylip                |      1 | {<span class="idiff left right">bio,cloud</span>}                                         | </span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext"> embassy-phylip                |      1 | {<span class="idiff left right">cloud,bio</span>}                                         | </span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> libdisorder                   |      1 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> libhmsbeagle                  |      1 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="plaintext"> libvistaio                    |      1 | {imaging-dev}                                       | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -185,19 +185,21 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> rambo-k                       |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> seqan                         |      1 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> sift                          |      1 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext"> sight                         |      1 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> stringtie                     |      1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> trace2dbest                   |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> velvetoptimiser               |      1 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> volpack                       |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> atropos                       |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> augur                         |      0 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> bambamc                       |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext"> bbmap                         |      0 | {covid-19}                                          | </span>
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext"> bamkit                        |      0 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="plaintext"> bbmap                         |      0 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> biojava4-live                 |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> biosig4c++                    |      0 | {physics}                                           | </span>
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> biosyntax                     |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> camp                          |      0 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> cufflinks                     |      0 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="plaintext"> conda-package-handling        |      0 | {bio-dev,bio}                                       | </span>
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="plaintext"> cufflinks                     |      0 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> emboss-explorer               |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="plaintext"> emmax                         |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="plaintext"> fis-gtm                       |      0 | {his}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -219,7 +221,7 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC221" class="line" lang="plaintext"> libchado-perl                 |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> libgenome                     |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> libgkarrays                   |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext"> libics                        |      0 | {<span class="idiff left right">imaging-dev,covid-19</span>}                              | </span>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext"> libics                        |      0 | {<span class="idiff left right">covid-19,imaging-dev</span>}                              | </span>
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="plaintext"> libjloda-java                 |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> libmaus2                      |      0 | {covid-19,bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> libmems                       |      0 | {bio-dev}                                           | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -231,7 +233,7 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> libseqlib                     |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> libstatgen                    |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> libxdf                        |      0 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext"> lighter                       |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext"> lighter                       |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> metastudent-data              |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> metastudent-data-2            |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> miaviewit                     |      0 | {imaging-dev}                                       | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -246,29 +248,33 @@ Last-Update: Tue, 21 Jul 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="plaintext"> pbcopper                      |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="plaintext"> pbseqlib                      |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="plaintext"> pilercr                       |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext"> quicktree                     |      0 | {bio,covid-19,bio-phylogeny}                        | </span>
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext"> relion                        |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="plaintext"> quicktree                     |      0 | {covid-19,bio-phylogeny,bio}                        | </span>
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<pre style="margin: 0;"> <span id="LC252" class="line" lang="plaintext"> relion                        |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="plaintext"> relion                        |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC254" class="line" lang="plaintext"> sambamba                      |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC255" class="line" lang="plaintext"> sbmltoolbox                   |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC256" class="line" lang="plaintext"> seq-gen                       |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC257" class="line" lang="plaintext"> simpleitk                     |      0 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC258" class="line" lang="plaintext"> skesa                         |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC259" class="line" lang="plaintext"> skewer                        |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="plaintext"> smrtanalysis                  |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="plaintext"> spaln                         |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="plaintext"> smrtanalysis                  |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="plaintext"> spaln                         |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC262" class="line" lang="plaintext"> srf                           |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="plaintext"> thesias                       |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="plaintext"> thesias                       |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC264" class="line" lang="plaintext"> tophat-recondition            |      0 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC265" class="line" lang="plaintext"> varna                         |      0 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="plaintext"> varscan                       |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext"> vienna-rna                    |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="plaintext"> varscan                       |      0 | {<span class="idiff left right">bio,covid-19</span>}                                      | </span>
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="plaintext"> vienna-rna                    |      0 | {<span class="idiff left right">covid-19,bio</span>}                                      | </span>
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="plaintext"> vtk-dicom                     |      0 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC269" class="line" lang="plaintext"> wtdbg2                        |      0 | {covid-19}                                          | </span>
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="plaintext"> bustools                      |     -1 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="plaintext"> pplacer                       |     -1 | {bio-phylogeny,covid-19,bio}                        | </span>
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="plaintext"> pycoqc                        |     -1 | {covid-19,bio}                                      | </span>
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<td class="diff-line-num new new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="plaintext"> dextractor                    |     -1 | {bio,covid-19}                                      | </span>
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<td class="diff-line-num new new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="plaintext"> intake                        |     -1 | {bio-dev,bio}                                       | </span>
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<td class="diff-line-num new new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="plaintext"> orthanc-python                |     -1 | {covid-19}                                          | </span>
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<td class="diff-line-num new new_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="plaintext"> pplacer                       |     -1 | {covid-19,bio,bio-phylogeny}                        | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="plaintext"> pycoqc                        |     -1 | {bio,covid-19}                                      | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="plaintext"> shovill                       |     -1 | {bio,covid-19}                                      | </span>
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<td class="diff-line-num new new_line" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="plaintext"> sight                         |     -1 | {imaging-dev}                                       | </span>
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272
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<td class="diff-line-num new_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
278
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="plaintext"> yanagiba                      |     -1 | {bio,covid-19}                                      | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
273
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<td class="diff-line-num new_line old" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext">(<span class="idiff left right">297</span> rows)</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="plaintext">(<span class="idiff left right">303</span> rows)</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
274
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280
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="plaintext"></span></pre>
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<li id="2654e31016bcee9bbe05d462121706cc8ed368af">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/254f0d17977f242024bb2eb2b977475950997d30#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
The diff for this file was not included because it is too large.
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