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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/mothur">Debian Med / mothur</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/3fb847522be597c27070057314421a173fc780f8">3fb84752</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-21T15:26:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.44.2</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/4715bcc7bdb082d981b36d40543e224150aec0da">4715bcc7</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-21T15:26:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/b447f4deb20d1d2d125d38dbe261e12deda04d44">b447f4de</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-21T15:26:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.44.2'
Update to upstream version '1.44.2'
with Debian dir e8b2e5251c12dc1edf577a9d5f426be91aaf5d34</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/335bd809591b6e45c4ca650887fb9f9bfd4c723e">335bd809</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-22T10:09:32+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/15551849c2fc8092ab1a8b66a8fae0b16d99aaf6">15551849</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-22T10:41:45+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix make call
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/a82ee3899b58834a95d9a7ef69e8802666a92dad">a82ee389</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-22T11:35:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not build uchime explicitly in d/rules
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/-/commit/a929146d7d4150c70ef25f65c9535376b303668c">a929146d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-22T11:59:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#8b67dc09b93b38e95da2a54036fa1db5b207cc5b">
Mothur.xcodeproj/project.pbxproj
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#4dbec6c44e9243fc5fae19cdbfbac6217e5a3a7d">
<span class="deleted-file">
−
debian/patches/0001-Add-hardening-flags.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#29a278f4dc70b0ebc3d910bd830a8fab4258f7a7">
debian/patches/0002-Fix-include.patch
</a>
</li>
<li class="file-stats">
<a href="#ec929ef01d1cf2a9933f4a573f16144feabcf330">
<span class="new-file">
+
debian/patches/fix_makefile.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#41b2c464d43e6a745382d0190405661972f7e324">
<span class="new-file">
+
source/calculators/calculator.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#cc02ccabb83842cbf73868a1dca19cd75f1c82a6">
source/calculators/calculator.h
</a>
</li>
<li class="file-stats">
<a href="#13ad55b77387bb6ee6405d089f5f1d9d5ddbf2d6">
<span class="new-file">
+
source/calculators/eachgapdist.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#792cae8366d14c2dd6fb80ad3eb8b4d2ac127ed9">
source/calculators/eachgapdist.h
</a>
</li>
<li class="file-stats">
<a href="#d388d1cba7f129867c4d95b9cd8f5a4f7cd9882d">
<span class="new-file">
+
source/calculators/eachgapignore.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#890712fc36ff2c5f0c01cd90c7300b304dc33817">
source/calculators/eachgapignore.h
</a>
</li>
<li class="file-stats">
<a href="#b758e7696ed98dd85d7c424ab3c67831f1682bcb">
<span class="new-file">
+
source/calculators/ignoregaps.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#4cead34b1569b4f8fb7a1802116ff37040c71f0b">
source/calculators/ignoregaps.h
</a>
</li>
<li class="file-stats">
<a href="#a5c37707c2d1c11cfbfec8e62405062cf657009e">
source/calculators/onegapdist.cpp
</a>
</li>
<li class="file-stats">
<a href="#e6c92bc44ff0e79e3f1d4b14cc50e4333ba09fe1">
source/calculators/onegapdist.h
</a>
</li>
<li class="file-stats">
<a href="#e8865493b31a27d587fa0be14196dbe02bb84e53">
<span class="new-file">
+
source/calculators/onegapignore.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#db626000a52b9bc657c75656fcf7af4abff994ed">
source/calculators/onegapignore.h
</a>
</li>
<li class="file-stats">
<a href="#c8433fd2295f76614b216c08cc7a3682e35c6906">
source/chimera/bellerophon.cpp
</a>
</li>
<li class="file-stats">
<a href="#88b0bfdcdc5cf64fb9714d192c230bde1a23fce4">
source/chimera/ccode.cpp
</a>
</li>
<li class="file-stats">
<a href="#065e62a811305cfb766b1113276a25ebefbf668f">
source/chimera/chimeraslayer.cpp
</a>
</li>
<li class="file-stats">
<a href="#989aed0998d378c3988dda7a12dc9c700883f2d1">
source/chimera/decalc.cpp
</a>
</li>
<li class="file-stats">
<a href="#6757ddfef2295423e7a175e3a3a7859c4cbc5201">
source/chimera/pintail.cpp
</a>
</li>
<li class="file-stats">
<a href="#ed5bd90214b2a3ef48786b8850a5ae79e4422e1e">
source/classifier/bayesian.cpp
</a>
</li>
<li class="file-stats">
<a href="#1ee8ec07f74988707d90bcd8bb5dc3655fa8acde">
source/classifier/classify.cpp
</a>
</li>
<li class="file-stats">
<a href="#b84b411c8cb2119dde9e6db141c7ad805f4a6462">
source/classifier/opticlassifier.cpp
</a>
</li>
<li class="file-stats">
<a href="#09a69407089b083b5a46d174589c0e896e61d859">
source/classifier/opticlassifier.hpp
</a>
</li>
<li class="file-stats">
<a href="#6d779b67ac0fd9ce363d4402569dc953cfd6a794">
source/commandfactory.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<a href="https://salsa.debian.org/med-team/mothur/-/compare/54c077bdb5909ff33920df24a3aa307c8663fd44...a929146d7d4150c70ef25f65c9535376b303668c">View it on GitLab</a>.
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