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<h3>
Shayan Doust pushed to branch master
at <a href="https://salsa.debian.org/med-team/phylip">Debian Med / phylip</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/phylip/-/commit/d8751b201eebcb8b10a53de68bdc10e56dc84059">d8751b20</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2020-07-23T17:33:58+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix gcc-10 multiple definition errors
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/phylip/-/commit/2d8f8486028b5185e969bc0801beacb78d63a29e">2d8f8486</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2020-07-23T17:35:30+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Append to changelog
</pre>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#e7052647d62791e2fe41be4930c22b4d9c262b98">
<span class="new-file">
+
debian/patches/fcommon-flag.patch
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</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/phylip/-/compare/d2499ead59090f9c76d2ae070a4916ad09321894...2d8f8486028b5185e969bc0801beacb78d63a29e#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">phylip (1:3.697+dfsg-2) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> [ Steffen Möller ]</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Added ref to conda</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * d/u/metadata: yamllint</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> [ Shayan Doust ]</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Fix gcc-10 multiple definition errors (Closes: #957681)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> -- Shayan Doust <hello@shayandoust.me> Thu, 23 Jul 2020 17:34:25 +0100</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">phylip (1:3.697+dfsg-1) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> * Fix watch file</span>
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<li id="e7052647d62791e2fe41be4930c22b4d9c262b98">
<a href="https://salsa.debian.org/med-team/phylip/-/compare/d2499ead59090f9c76d2ae070a4916ad09321894...2d8f8486028b5185e969bc0801beacb78d63a29e#e7052647d62791e2fe41be4930c22b4d9c262b98"><strong>debian/patches/fcommon-flag.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: add -fcommon flag during compilation</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"> Porting to gcc-10 requires a handful of source modification / patching so simply just add -fcommon for now.</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Author: Shayan Doust <hello@shayandoust.me></span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Last-Update: 2020-07-23</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">---</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">Index: phylip/src/Makefile.unx</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- phylip.orig/src/Makefile.unx</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ phylip/src/Makefile.unx</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="p">@@ -98,7 +98,7 @@</span> CC = gcc</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> #CFLAGS = -g </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> #</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> # An optimized one for gcc</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS += -O3 -DUNX -fomit-frame-pointer</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS += -O3 -DUNX -fomit-frame-pointer -fcommon</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> #</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> # For some serious debugging using Gnu gcc</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> #</span></pre>
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<a href="https://salsa.debian.org/med-team/phylip/-/compare/d2499ead59090f9c76d2ae070a4916ad09321894...2d8f8486028b5185e969bc0801beacb78d63a29e#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,3 +4,4 @@ hardening.patch</td>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">do_not_install_jar_files.patch</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">soname.patch</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">optimisation_flags.patch</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">fcommon-flag.patch</span></pre>
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