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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/libbpp-phyl">Debian Med / libbpp-phyl</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/a78f39971ac6ab1f6936de69438cc31089ea5b13">a78f3997</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/f5581ef1334e0fda54335a9cd21f6402f8094779">f5581ef1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/01a8f7dba65a4f6a60263b62625436c56a264ab8">01a8f7db</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:11+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/2f46c62ef125dfc305dd08a97c9b312493ddd411">2f46c62e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:11+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/e36a17769162c5a8432f827a06363234f7155394">e36a1776</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-file-is-missing
See-also: https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/81c36286a1db66ab64fbb967745bde332a51b9ca">81c36286</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refer to specific version of license GPL-2+.
Changes-By: lintian-brush
Fixes: lintian: copyright-refers-to-symlink-license
See-also: https://lintian.debian.org/tags/copyright-refers-to-symlink-license.html
Fixes: lintian: copyright-refers-to-versionless-license-file
See-also: https://lintian.debian.org/tags/copyright-refers-to-versionless-license-file.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/764251949e75be0697cb5f11b5ef064e577d4324">76425194</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:18:22+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix day-of-week for changelog entry 2.0.3-1.
Changes-By: lintian-brush
Fixes: lintian: debian-changelog-has-wrong-day-of-week
See-also: https://lintian.debian.org/tags/debian-changelog-has-wrong-day-of-week.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/a2fe9beb6527f2349a009e594bf4487c4def6b3b">a2fe9beb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T11:43:54+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update symbols for gcc-10
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libbpp-phyl/-/commit/294a9f1c2764b146820b6daac768bcb84483c731">294a9f1c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-23T12:03:07+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
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<li class="file-stats">
<a href="#12fd29a7daadd9b128d13ddae917bf7a78a15ec4">
debian/libbpp-phyl12.symbols.amd64
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<span class="new-file">
+
debian/upstream/metadata
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</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">libbpp-phyl (2.4.1-4) unstable; urgency=medium</span>
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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Standards-Version: 4.5.0 (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Add salsa-ci file (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> Repository-Browse.</span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Refer to specific version of license GPL-2+.</span>
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Fix day-of-week for changelog entry 2.0.3-1.</span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Update symbols for gcc-10</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> Closes: #957425</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Thu, 23 Jul 2020 11:44:02 +0200</span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">libbpp-phyl (2.4.1-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> [ Julien Dutheil ]</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -197,7 +212,7 @@ libbpp-phyl (2.0.3-1) unstable; urgency=low</td>
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197
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="plaintext"> * New pairwise models</span>
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="plaintext"> * Several bugs fixed</span>
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> -- Julien Dutheil <julien.dutheil@univ-montp2.fr> <span class="idiff left right">Thu</span>, 09 Feb 2013 16:00:00 +0100</span>
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="plaintext"> -- Julien Dutheil <julien.dutheil@univ-montp2.fr> <span class="idiff left right">Sat</span>, 09 Feb 2013 16:00:00 +0100</span>
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216
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC217" class="line" lang="plaintext">libbpp-phyl (2.0.2-1) unstable; urgency=low</span>
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203
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,14 +4,15 @@ Uploaders: Julien Dutheil <julien.dutheil@univ-montp2.fr>,</td>
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">2</span>),</span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">3</span>),</span>
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> cmake,</span>
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9
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> d-shlibs (>= 0.82),</span>
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10
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> libbpp-seq-dev (>= 2.4.1)</span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">4</span>.0</span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5</span>.0</span>
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12
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/libbpp-phyl</span>
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/libbpp-phyl.git</span>
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Package: libbpp-phyl-dev</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Architecture: any</span>
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<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -30,7 +30,7 @@ License: GPL-2+</td>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> On Debian systems, the complete text of the GNU General</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> Public License can be found in `/usr/share/common-licenses/GPL'.</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> Public License can be found in `/usr/share/common-licenses/GPL<span class="idiff left right">-2</span>'.</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext">License: CeCILL</span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> CeCILL FREE SOFTWARE LICENSE AGREEMENT</span>
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<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#12fd29a7daadd9b128d13ddae917bf7a78a15ec4"><strong>debian/libbpp-phyl12.symbols.amd64</strong></a>
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<li id="b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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<a href="https://salsa.debian.org/med-team/libbpp-phyl/-/compare/dd31e26ce91b4335ddb5e5285c07693334464365...294a9f1c2764b146820b6daac768bcb84483c731#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">---</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Database: https://github.com/BioPP/bpp-phyl/issues</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">Bug-Submit: https://github.com/BioPP/bpp-phyl/issues/new</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">Repository: https://github.com/BioPP/bpp-phyl.git</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">Repository-Browse: https://github.com/BioPP/bpp-phyl</span></pre>
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