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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/prime-phylo">Debian Med / prime-phylo</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/prime-phylo/-/commit/b3c02681cb52ad77cc338705da694c185de90932">b3c02681</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-07-26T20:00:10+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix gcc-10 FTBFS
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prime-phylo/-/commit/76b05459949f9abf88c4cbd3652c4c74c15703b1">76b05459</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-07-26T20:01:00+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">compat version: 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prime-phylo/-/commit/7f9306c914c5525ca17fe69095b0f2bd4a1aff5d">7f9306c9</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-07-26T20:01:23+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add "Rules-Requires-Root:no"
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prime-phylo/-/commit/63b1fa815c87a9fef74b451b29def3ce32e70103">63b1fa81</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-07-26T20:02:30+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update changelog
</pre>
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<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#7f53ed84b91e0825dc3b83b0990376bd4aaa1f81">
<span class="new-file">
+
debian/patches/0004-fix-gcc10-build.patch
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">prime-phylo (1.0.11-9) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Fix gcc-10 FTBFS (Closes: #957708)</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * compat version: 13</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Add "Rules-Requires-Root:no"</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> -- Nilesh Patra <npatra974@gmail.com> Sun, 26 Jul 2020 20:01:51 +0530</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">prime-phylo (1.0.11-8) unstable; urgency=medium</span>
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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> * Suggests: s/python-biopython/python3-biopython/</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,7 +4,7 @@ Uploaders: Erik Sjolund <erik.sjolund@gmail.com>,</td>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">2</span>),</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">3</span>),</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> gengetopt,</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> cmake,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> libblas-dev,</span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -22,6 +22,7 @@ Standards-Version: 4.4.1</td>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/prime-phylo</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/prime-phylo.git</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Homepage: http://prime.sbc.su.se</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext">Package: prime-phylo</span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext">Architecture: any</span>
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<li id="7f53ed84b91e0825dc3b83b0990376bd4aaa1f81">
<a href="https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103#7f53ed84b91e0825dc3b83b0990376bd4aaa1f81"><strong>debian/patches/0004-fix-gcc10-build.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Author: Nilesh Patra <npatra974@gmail.com></span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Description: Append extern to prevent gcc-10 FTBFS</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?archive=no&bug=957708</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Last-Updated: July 26, 2020</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff">--- a/src/cxx/libraries/sfile/gbread.c</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/cxx/libraries/sfile/gbread.c</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="p">@@ -1,7 +1,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> #include <stdio.h></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-int yydebug;</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+extern int yydebug;</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> #include "sfile.h"</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> #include "gb.tab.h"</span></pre>
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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<a href="https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,3 +2,4 @@</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">fix-ftbfs-with-Boost160.patch</span>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">fix-gcc-8.patch</span>
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">0003-Fix-build-with-Boost-1.67.patch</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">0004-fix-gcc10-build.patch</span></pre>
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