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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8d234d53853774ad1da0522b0ae308d24d2b9adb">8d234d53</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-07-31T13:44:18+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8d234d53853774ad1da0522b0ae308d24d2b9adb#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 31 Jul 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 31 Jul 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 16<span class="idiff left right">9</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">0</span> | {practice,covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 16<span class="idiff left right">6</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">1</span> | {practice,covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 44 | {his,laboratory,covid-19,imaging,practice,oncology} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">7</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">6</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">5</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">5</span> | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools | 23 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dcm2niix | 19 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope | 19 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> gnumed-server | 18 | {covid-19,practice} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> gdcm | 16 | {covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> ngs-sdk | 14 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> <span class="idiff left right">gdcm | 13</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> <span class="idiff left right">insighttoolkit4 | 10</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> <span class="idiff left right">insighttoolkit4 | 12</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> <span class="idiff left right">gdcm | 11</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> invesalius | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> adun.app | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> <span class="idiff left right">melting | 8 | {cloud,bio}</span> | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> <span class="idiff left right">adun.app | 8 | {bio} </span> | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> minc-tools | 8 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> orthanc-webviewer | 8 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> psychopy | 8 | {psychology} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> biojava-live | 7 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> fastlink | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> jebl2 | 7 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> melting | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> openslide | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> orthanc-dicomweb | 7 | {covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> phyutility | 7 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -32,7 +32,6 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> sibsim4 | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> sigma-align | 7 | {bio,cloud,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> bart-view | 6 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> libdivsufsort | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> librg-utils-perl | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> mipe | 6 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> obitools | 6 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -48,7 +47,7 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> embassy-domalign | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> embassy-domsearch | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> king | 5 | {typesetting,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> l<span class="idiff left right">agan | 5 | {bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> l<span class="idiff left right">ibdivsufsort | 5 | {bio-dev}</span> | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> mauve-aligner | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> neobio | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> orthanc-postgresql | 5 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -58,7 +57,6 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> pymia | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> rdp-readseq | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> repeatmasker-recon | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> runcircos-gui | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> saint | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> scythe | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> spread-phy | 5 | {bio-phylogeny,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -81,6 +79,7 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> ghmm | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> harvest-tools | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> ipig | 4 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> lagan | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> libminc | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> libncl | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> librdp-taxonomy-tree-java | 4 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -94,6 +93,7 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> rdp-classifier | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> relion | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> rtax | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="plaintext"> runcircos-gui | 4 | {bio} | </span>
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97
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97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> salmon | 4 | {covid-19,bio} | </span>
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98
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98
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> scrm | 4 | {bio} | </span>
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99
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99
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> sprai | 4 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -171,6 +171,7 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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171
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> biosig4c++ | 1 | {physics,imaging-dev} | </span>
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<td class="diff-line-num old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
172
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> cat-bat | 1 | {covid-19,bio} | </span>
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<td class="diff-line-num new old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext"> conda-package-handling | 1 | {bio-dev,bio} | </span>
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="plaintext"> embassy-phylip | 1 | {cloud,bio} | </span>
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<td class="diff-line-num old_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> emmax | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> kmerresistance | 1 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -197,7 +198,6 @@ Last-Update: Fri, 31 Jul 2020 01:42:04 +0000</td>
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197
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> biosig4c++ | 0 | {physics} | </span>
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> conda-package-handling | 0 | {bio-dev,bio} | </span>
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201
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="plaintext"> ctn | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="plaintext"> cufflinks | 0 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> dextractor | 0 | {bio,covid-19} | </span>
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