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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/biobambam2">Debian Med / biobambam2</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/biobambam2/-/commit/9a13df0984cc39e569b239c0dd01acf056e58697">9a13df09</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-08-10T21:25:41+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: removed dependency to zlib1g-dev
This is done in favor of using the zlib1g which should now be properly
pulled by the libmaus2 dependency.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/biobambam2/-/commit/0c28cd492fca392605936eecb259cc54a0cc07fd">0c28cd49</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-08-10T21:58:37+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: depend on libmaus2 (>= 2.0.740+dfsg-2)
This version is known to address issues with biobambam2 autopkgtest.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/biobambam2/-/commit/eed8557fd96834ac16ad973c373d3786af6ceee2">eed8557f</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-08-10T23:08:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">team upload
</pre>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/biobambam2/-/compare/32610bc58324611d5c7ada32f98c91d6f4ebe257...eed8557fd96834ac16ad973c373d3786af6ceee2#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">biobambam2 (2.0.173+ds-2) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Remove the zlib1g-dev dependency, as zlib1g should now be properly pulled</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> and used by libmaus2 (>= 2.0.740+dfsg-2).</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> -- Étienne Mollier <etienne.mollier@mailoo.org> Mon, 10 Aug 2020 21:22:20 +0200</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">biobambam2 (2.0.173+ds-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> * Team upload.</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/biobambam2/-/compare/32610bc58324611d5c7ada32f98c91d6f4ebe257...eed8557fd96834ac16ad973c373d3786af6ceee2#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,7 +5,7 @@ Section: science</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> pkg-config,</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> libmaus2-dev (>= 2.0.7<span class="idiff left right">19</span>)</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> libmaus2-dev (>= 2.0.7<span class="idiff left right">40+dfsg-2</span>)</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Standards-Version: 4.5.0</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/biobambam2</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/biobambam2.git</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -15,8 +15,7 @@ Rules-Requires-Root: no</td>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Package: biobambam2</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">Architecture: any</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Depends: ${shlibs:Depends},</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> ${misc:Depends},</span>
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19
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> zlib1g-dev</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> ${misc:Depends}</span>
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20
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Description: tools for early stage alignment file processing</span>
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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
21
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> This package contains some tools for processing BAM files, including</span>
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22
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> .</span>
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