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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/igv">Debian Med / igv</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/14c8d69031f3636747cf9885ddfe8336a11bc85a">14c8d690</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T09:57:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/e30b211d4c8877140a72412e32a43bf093239f28">e30b211d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T09:57:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.8.10+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/61632fccf2902363cc801e8e25b98b888a787087">61632fcc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T09:59:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.8.10+dfsg'
Update to upstream version '2.8.10+dfsg'
with Debian dir 0ef0818bc2a8c1e042033951e3bbd812933bf4b3</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/8fad426fcf946f211e916c09736a515b22dc2eb9">8fad426f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T09:59:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/e3b4409bcc0d4df5ff2c652fa33eaf2da6fb517e">e3b4409b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T09:59:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/b2096ea30e30db2ae02eb7b0253db2e0ee241732">b2096ea3</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:00:09+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/50489a2c55e3c563352dae64e355dab312e35e66">50489a2c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:00:09+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/b327dc3c561ef9cbdde26837a670eee4652714b9">b327dc3c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:00:16+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove duplicate line from changelog.
Changes-By: lintian-brush
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/a3ba8bbfa13f49a88ccbc7b9bc41fdae5c020a25">a3ba8bbf</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:00:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use secure URI in Homepage field.
Changes-By: lintian-brush
Fixes: lintian: homepage-field-uses-insecure-uri
See-also: https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/213a35a2c934eccd812f65c555d8fca9ccf5bc7b">213a35a2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:02:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/-/commit/9820402dcd69d14b3647b9c83bc2bfc850179994">9820402d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-08-21T10:46:07+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">No need to fiddle around with build.gradle files any more
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#26faf2a07a9e1acfeeda717bc1a5b409d726f22e">
IGV.iml
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#f07866736216be0ee2aba49e392191aeae700a35">
build.gradle
</a>
</li>
<li class="file-stats">
<a href="#0ae54ab4d88e06323920d027649da7246640130f">
<span class="deleted-file">
−
build_java11.gradle
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#e996eb6a59ba3e1f59429a84239f9bc1158cd221">
<span class="new-file">
+
docs/AWS.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#0b59a06aec235c8ae40c4513f351a515b779a0c6">
genomes/db/hg19/hg19_annotations.xml
</a>
</li>
<li class="file-stats">
<a href="#06af505b8fe47918e4aa2c7640e331d75611f2cb">
genomes/db/hg19/hg19_dataServerRegistry.txt
</a>
</li>
<li class="file-stats">
<a href="#f600f684fc7097c845838671cc23117598648f06">
<span class="new-file">
+
genomes/db/hg19/tcga_stddata__2016_01_28.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#7869d51c2abcd300ad4d1b550c0ce78f64f7bd56">
<span class="new-file">
+
genomes/db/hg19/tutorials.hg19.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#79af1f1fc0b2f1f64f1360f3f80e71bb81998051">
genomes/genomes.txt
</a>
</li>
<li class="file-stats">
<a href="#ec27dae6e852c099bfcae8de5204d286bb6f04ff">
gradle/wrapper/gradle-wrapper.jar
</a>
</li>
<li class="file-stats">
<a href="#fbe448ebfc3eb2d4e308f6b8b043666f5b57235e">
gradle/wrapper/gradle-wrapper.properties
</a>
</li>
<li class="file-stats">
<a href="#5bbfa66edb4db3c7c33c5181f43510990d3307f9">
gradlew
</a>
</li>
<li class="file-stats">
<a href="#2a45a911a8f1836b0b6c5b758962572012d8f8c3">
gradlew.bat
</a>
</li>
<li class="file-stats">
<a href="#ef54b3754d35455eba7cd94a22d18ca3d3704bc9">
<span class="deleted-file">
−
lib/AbsoluteLayout.jar
</span>
</a>
</li>
<li class="file-stats">
<a href="#af215dda44c4f59b386cd07980871055895740b7">
<span class="deleted-file">
−
lib/goby-io-igv-1.1.jar
</span>
</a>
</li>
<li class="file-stats">
<a href="#ddc8cf35d1f13667df623a146674bed9127cbbfd">
<span class="deleted-file">
−
lib/jide-common-3.7.3.jar
</span>
</a>
</li>
<li class="file-stats">
<a href="#45bb220a63be74ec5e7aae4b40ecda611c153adb">
<span class="new-file">
+
scripts/igv-launcher.bat
</span>
</a>
</li>
<li class="file-stats">
<a href="#4d771f1ae4b1400dc9c9bf70b7a1525b9aea2877">
scripts/java11/igv.args
→
scripts/igv.args
</a>
</li>
<li class="file-stats">
<a href="#a289ffe94e4675c3650f1ce675616092e8f63afc">
scripts/igv.bat
</a>
</li>
<li class="file-stats">
<a href="#e2b3b7ad7925dd429929038ac625df473e8789fc">
scripts/igv.command
</a>
</li>
<li class="file-stats">
<a href="#0124f491726c28872f3c99ee7243e977028bf42c">
<span class="deleted-file">
−
scripts/igv.php
</span>
</a>
</li>
<li class="file-stats">
<a href="#a21cd47f471d78574815c875103673c2e0775094">
scripts/igv.sh
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #777;">
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