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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/paleomix">Debian Med / paleomix</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/paleomix/-/commit/f1321f2f267d6cb9ee01bc8889e7e44e29fa8c4f">f1321f2f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-01T07:57:45+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.3.0</pre>
</li>
</ul>
<h4>25 changed files:</h4>
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<li class="file-stats">
<a href="#eff4cd4a1e08155d42c85e48787c9e4c288b8d02">
tests/.coveragerc
→
.coveragerc
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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</li>
<li class="file-stats">
<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e">
CHANGES.md
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</li>
<li class="file-stats">
<a href="#3374c1c18de688d968548dc001e40ee700f04f6f">
<span class="deleted-file">
−
INSTALL.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
licenses/mit.txt
→
LICENSE
</a>
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<li class="file-stats">
<a href="#8875df48c18030126ef5ef5a6f5c93b23451fb9f">
MANIFEST.in
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<li class="file-stats">
<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
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</li>
<li class="file-stats">
<a href="#5f496f892af6f1236d52a40e93f45d806a0f0dfb">
<span class="deleted-file">
−
bin/bam_pipeline
</span>
</a>
</li>
<li class="file-stats">
<a href="#c97c24edf662577079bed651de857bc30f1cf0e0">
<span class="deleted-file">
−
bin/bam_rmdup_collapsed
</span>
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<li class="file-stats">
<a href="#905961633af05fef6692b1ebeb4ec32b98525430">
<span class="deleted-file">
−
bin/conv_gtf_to_bed
</span>
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<li class="file-stats">
<a href="#0efc9369c10b53533cebc499e82cdfca13b2eee7">
<span class="deleted-file">
−
bin/paleomix
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<li class="file-stats">
<a href="#eabc3765a6620b86864030ad697bc646bc47822f">
<span class="deleted-file">
−
bin/phylo_pipeline
</span>
</a>
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<li class="file-stats">
<a href="#70129b06e60cc1aa923380f66527099c89c2507d">
<span class="deleted-file">
−
bin/trim_pipeline
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</a>
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<li class="file-stats">
<a href="#0fdbda66ca3b7b0b45b2a4108379ad19f7923a9e">
docs/bam_pipeline/configuration.rst
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<li class="file-stats">
<a href="#a259c04ac2ca00c04be3cdef20e96553c1ba99d2">
docs/bam_pipeline/filestructure.rst
</a>
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<li class="file-stats">
<a href="#9b975bd2ff9693c7c71cb9a30c6315d7e1196d43">
docs/bam_pipeline/index.rst
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<li class="file-stats">
<a href="#bdbed2cbd88d3bb7d47c29d5bb99a3214a39ec6c">
docs/bam_pipeline/makefile.rst
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<li class="file-stats">
<a href="#7cb682e76bde2cb9190cebd3988bd33952e473b2">
docs/bam_pipeline/makefile.yaml
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<li class="file-stats">
<a href="#e5368178d38862b612c03eac3e417a38b54bc3b6">
docs/bam_pipeline/overview.rst
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</li>
<li class="file-stats">
<a href="#37106ac55933b60ea232abb2c9bb974138d9da0b">
docs/bam_pipeline/requirements.rst
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<li class="file-stats">
<a href="#19d875d2f02769cf6d8972936b903f6bd24332ea">
docs/bam_pipeline/usage.rst
</a>
</li>
<li class="file-stats">
<a href="#254a2da7a740675e537439eb88e32083b9ea4771">
docs/conf.py
</a>
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<li class="file-stats">
<a href="#f8d5a6bb24268dda499e1c25908cbc30839cb474">
docs/examples.rst
</a>
</li>
<li class="file-stats">
<a href="#d0153cac95479af9bfb99b746b633bc8255bb53a">
docs/index.rst
</a>
</li>
<li class="file-stats">
<a href="#5f751d21bc12129082e8f5d7b3edbc140a238ce7">
docs/installation.rst
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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