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<h3>
Aaron M. Ucko pushed to branch master
at <a href="https://salsa.debian.org/med-team/ncbi-blastplus">Debian Med / ncbi-blastplus</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/e46881b79153db2f10891dbb81fef89844ba1ab8">e46881b7</a></strong>
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<span>by Aaron M. Ucko</span>
<i>at 2020-09-07T21:15:03-04:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">ncbi-blast+ 2.10.0-3: Tweak debian/patches/tune_32bit_lmdb_defaults.
* For 64-bit platforms, use an explicit UL suffix on one factor to avoid
overflow.
* For 32-bit platforms, avoid tying up quite so much address space, since
opening a pair of databases is a distinct possibility.
* Generally parenthesize expressions per best macro practice.
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<h4>2 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#c617033b6580480a91c350dc620332759e9d3f97">
debian/patches/tune_32bit_lmdb_defaults
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/e46881b79153db2f10891dbb81fef89844ba1ab8#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">ncbi-blast+ (2.10.0-3) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * debian/patches/tune_32bit_lmdb_defaults: Tweak default map size expressions.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> - For 64-bit platforms, use an explicit UL suffix on one factor to avoid</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> overflow.</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> - For 32-bit platforms, avoid tying up quite so much address space, since</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> opening a pair of databases is a distinct possibility.</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> - Generally parenthesize expressions per best macro practice.</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> -- Aaron M. Ucko <ucko@debian.org> Mon, 07 Sep 2020 21:15:02 -0400</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">ncbi-blast+ (2.10.0-2) unstable; urgency=high</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> * debian/patches/support_gcc10: Additionally tweak ncbifile.cpp to avoid</span>
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<li id="c617033b6580480a91c350dc620332759e9d3f97">
<a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/e46881b79153db2f10891dbb81fef89844ba1ab8#c617033b6580480a91c350dc620332759e9d3f97"><strong>debian/patches/tune_32bit_lmdb_defaults</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,9 +7,9 @@ Index: b/c++/include/objtools/blast/seqdb_writer/writedb_lmdb.hpp</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"> BEGIN_NCBI_SCOPE</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"> </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if NCBI_PLATFORM_BITS >= 64</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# define NCBI_WRITEDB_DEFAULT_MAP_SIZE <span class="idiff left right">300 * 1000 * 1000 * 1000</span></span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# define NCBI_WRITEDB_DEFAULT_MAP_SIZE <span class="idiff left right">(300UL * 1000 * 1000 * 1000)</span></span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#else</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# define NCBI_WRITEDB_DEFAULT_MAP_SIZE <span class="idiff left right">1000 * 1000 * 1000</span></span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# define NCBI_WRITEDB_DEFAULT_MAP_SIZE <span class="idiff left right">(750 * 1000 * 1000)</span></span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#endif</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="diff"> </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="diff"> /// This class supports creation of a string accession to integer OID</span>
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