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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/picard-tools">Debian Med / picard-tools</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/52c1b86dac547113f1be9ebc73f0fa8606eb5ec3">52c1b86d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:10:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/01c5415aa6a32988d26a2e2902dada15922b5d2f">01c5415a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:10:08+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.23.4+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/816872356e370de263fb06b5efb12a58948039b7">81687235</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:11:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.23.4+dfsg'
Update to upstream version '2.23.4+dfsg'
with Debian dir 78f32fb37a4b4088cee49c1b6ce9e0e54c3f745a</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/37150e782dcba2de7bbaf397178664fd267a9630">37150e78</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:11:18+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove unnecessary Team Upload line in changelog.
Changes-By: lintian-brush
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/66443f6c448f584dc8898be83e43506650cd16b6">66443f6c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:41:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove redundant debian/gbp.conf
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/83a4164fbdc9d668e12dd98c963460393bd825df">83a4164f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:42:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Help lintian to spot correct doc-base file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/584de87451794beb421d28b4b5efb2e3e11b1798">584de874</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-10T17:59:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#67df3adc98b97f87d2c73e4a05f22a987c3a5a7b">
<span class="deleted-file">
−
debian/gbp.conf
</span>
</a>
</li>
<li class="file-stats">
<a href="#baa788d730bbbedf40778d7623dfb2301668290b">
debian/libpicard-java-doc.javadoc
</a>
</li>
<li class="file-stats">
<a href="#bac4c9ac8d5063b8b48c84e1a30915ee1d4b4523">
src/main/java/picard/analysis/AlignmentSummaryMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#39ad2a42470243aa1402488d16e8309995fc1180">
src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java
</a>
</li>
<li class="file-stats">
<a href="#3a02115cc24686ccecd94ec7f340c5890a553d38">
src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#a8427986ca1c000c6402307f4ef77043d503630e">
src/main/java/picard/analysis/CollectInsertSizeMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#2269f0b41b877093e5ef84c96198be511137ddbc">
src/main/java/picard/analysis/CollectMultipleMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#393734d007446557b291436617a31138ffb7f363">
src/main/java/picard/analysis/WgsMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#05e6f479dd566a459b9d5983f525f9b8b7dac2bd">
src/main/java/picard/analysis/artifacts/CollectSequencingArtifactMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#4b494ef67355a05286058b71311a9448ce743651">
src/main/java/picard/fingerprint/CheckFingerprint.java
</a>
</li>
<li class="file-stats">
<a href="#f7d76d352dfb807611c35d4412191ed995aa7003">
src/main/java/picard/fingerprint/CrosscheckFingerprints.java
</a>
</li>
<li class="file-stats">
<a href="#c3522ad5b834cc5c5ba705bd1f56a4c19c5c6348">
src/main/java/picard/fingerprint/ExtractFingerprint.java
</a>
</li>
<li class="file-stats">
<a href="#b8553f759ce8bc72a7ed6f6994097c2fc323b375">
src/main/java/picard/fingerprint/FingerprintChecker.java
</a>
</li>
<li class="file-stats">
<a href="#1b8dcaf3087ae54f9c79de634dab1eb872b710a2">
src/main/java/picard/metrics/MultiLevelCollector.java
</a>
</li>
<li class="file-stats">
<a href="#87cdeb4d4b2d5d5f8a0e9c7a523936565c36e141">
src/main/java/picard/sam/AbstractAlignmentMerger.java
</a>
</li>
<li class="file-stats">
<a href="#24597f37909f2f46c79e31b9aced5c95eaf26241">
src/main/java/picard/sam/MergeBamAlignment.java
</a>
</li>
<li class="file-stats">
<a href="#efee1bc787600365205808166ac6f665c6886fe5">
src/main/java/picard/util/IntervalListToBed.java
</a>
</li>
<li class="file-stats">
<a href="#401a78d847fbde71d9c57701df83bc5087b99ce7">
src/main/java/picard/vcf/VcfToIntervalList.java
</a>
</li>
<li class="file-stats">
<a href="#5f3040dd99f18a22df9ef4c5883176c1ca2e81cc">
<span class="new-file">
+
src/main/resources/picard/analysis/readLengthDistribution.R
</span>
</a>
</li>
<li class="file-stats">
<a href="#c36fb766f4304ff815fcc6e04602b7de53b60e1a">
src/test/java/picard/analysis/CollectAlignmentSummaryMetricsTest.java
</a>
</li>
<li class="file-stats">
<a href="#ded3340653d70e3e72d15c8da946ee9e562bc7f5">
src/test/java/picard/analysis/CollectMultipleMetricsTest.java
</a>
</li>
<li class="file-stats">
<a href="#da630422441285d103dff1bde4062a6af041369d">
src/test/java/picard/analysis/CollectOxoGMetricsTest.java
</a>
</li>
<li class="file-stats">
<a href="#1a6526f3934fb043a283e260549320c8ca1d23c9">
src/test/java/picard/analysis/CollectWgsMetricsTest.java
</a>
</li>
<li class="file-stats">
<a href="#bacfb8c9ff23d4c89261cd1d1544a71f7d14b325">
src/test/java/picard/analysis/MultiLevelCollectorTest.java
</a>
</li>
<li class="file-stats">
<a href="#904abdf0d0555bd80b472c400ae9ddb54d1a544a">
src/test/java/picard/analysis/artifacts/ConvertSequencingArtifactToOxoGTest.java
</a>
</li>
<li class="file-stats">
<a href="#ab86f6e2f76c15f663583b265ff38ade998a292a">
src/test/java/picard/cmdline/CommandLineProgramTest.java
</a>
</li>
<li class="file-stats">
<a href="#8e47b09e231ce09b8b2b713f2020679c7cc00327">
src/test/java/picard/fingerprint/FingerprintCheckerTest.java
</a>
</li>
<li class="file-stats">
<a href="#e84857c281e320ba6261d4b9baff1fa3d650085b">
<span class="new-file">
+
src/test/java/picard/fingerprint/LiftOverHaplotypeMapTest.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#5ad8fc5419284b4fabb2c48d2b90bf25c972606f">
src/test/java/picard/sam/AbstractAlignmentMergerTest.java
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #777;">
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