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<h3>
Dylan Aïssi pushed to branch master
at <a href="https://salsa.debian.org/med-team/qtltools">Debian Med / qtltools</a>
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<h4>
Commits:
</h4>
<ul>
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<strong><a href="https://salsa.debian.org/med-team/qtltools/-/commit/5e514e3c2de12d472f5d50994583fd5781985140">5e514e3c</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2020-09-11T10:43:30+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove debian/patches/Spelling_error.patch, applied upstream
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<strong><a href="https://salsa.debian.org/med-team/qtltools/-/commit/67bb0ca999188342ed5f44c2a2ec6cf7c6d8fa07">67bb0ca9</a></strong>
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<span>by Dylan Aïssi</span>
<i>at 2020-09-11T10:45:42+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove debian/patches/reproducible_build.patch, applied upstream
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<h4>3 changed files:</h4>
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<a href="#ca357d26fe01ad9e1f46eeae8aea159fd2b9c3f3">
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−
debian/patches/Spelling_error.patch
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<a href="#a8acb8f92d9ad3c7a79974b1b126f9309361c653">
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−
debian/patches/reproducible_build.patch
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<h4>Changes:</h4>
<li id="ca357d26fe01ad9e1f46eeae8aea159fd2b9c3f3">
<a href="https://salsa.debian.org/med-team/qtltools/-/compare/bf75ad7a011683e7a3a0914acc583065d28bedd6...67bb0ca999188342ed5f44c2a2ec6cf7c6d8fa07#ca357d26fe01ad9e1f46eeae8aea159fd2b9c3f3"><strong>debian/patches/Spelling_error.patch</strong>
deleted
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Dylan Aïssi</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="diff"><span class="p">Description: Fix spelling error.</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="diff"><span class="p">Last-Update: 2019-09-30</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: https://github.com/qtltools/qtltools/pull/3</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff">--- a/src/mode_fdensity/fdensity_main.cpp</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/mode_fdensity/fdensity_main.cpp</span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="p">@@ -49,7 +49,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"> //---------------------</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"> // 3. PRINT HELP/HEADER</span>
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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="diff"> //---------------------</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- vrb.ctitle("ANNOTATION DENSITY ARROUND QTLs");</span></span>
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<td class="diff-line-num old old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ vrb.ctitle("ANNOTATION DENSITY AROUND QTLs");</span></span>
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<td class="diff-line-num old old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="diff"> if (D.options.count("help")) {</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="diff"> cout << D.option_descriptions << endl;</span>
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<td class="diff-line-num old old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="diff"> exit(EXIT_SUCCESS);</span></pre>
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<li id="a8acb8f92d9ad3c7a79974b1b126f9309361c653">
<a href="https://salsa.debian.org/med-team/qtltools/-/compare/bf75ad7a011683e7a3a0914acc583065d28bedd6...67bb0ca999188342ed5f44c2a2ec6cf7c6d8fa07#a8acb8f92d9ad3c7a79974b1b126f9309361c653"><strong>debian/patches/reproducible_build.patch</strong>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Reiner Herrmann <reiner@reiner-h.de></span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="diff"><span class="p">Description: Sort source files for deterministic linking order</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="diff"><span class="p">Bug-Debian: https://bugs.debian.org/848280</span></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: TODO</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff">--- a/Makefile</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/Makefile</span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="p">@@ -23,8 +23,8 @@</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"> BFILE=bin/QTLtools</span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"> HFILE=$(shell find src -name *.h)</span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="diff"> TFILE=$(shell find lib -name *.h)</span>
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<td class="diff-line-num old old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFILE=$(shell find src -name *.cpp)</span></span>
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13
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-OFILE=$(shell for file in `find src -name *.cpp`; do echo obj/$$(basename $$file .cpp).o; done)</span></span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFILE=$(shell find src -name *.cpp | LC_ALL=C sort)</span></span>
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15
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+OFILE=$(shell for file in `find src -name *.cpp | LC_ALL=C sort`; do echo obj/$$(basename $$file .cpp).o; done)</span></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="diff"> VPATH=$(shell for file in `find src -name *.cpp`; do echo $$(dirname $$file); done)</span>
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17
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="diff"> #DEFAULT VERSION (SET UP THE VARIABLES IN THE BEGINING OF THE MAKEFILE)</span></pre>
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<a href="https://salsa.debian.org/med-team/qtltools/-/compare/bf75ad7a011683e7a3a0914acc583065d28bedd6...67bb0ca999188342ed5f44c2a2ec6cf7c6d8fa07#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Makefile_config.patch</span></pre>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">Spelling_error.patch</span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">reproducible_build.patch</span></pre>
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