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<h3>
Rebecca N. Palmer pushed to branch master
at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/dbbe54b21febb03f3088ea3e5ad448da3ba4ccd4">dbbe54b2</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2020-09-13T15:45:04+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.24.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/64520a9b0cf56740627ca1b74d57dddbd2ae6af8">64520a9b</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2020-09-13T15:45:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.24.1'
Update to upstream version '5.24.1'
with Debian dir ad7df31dd825f717322d4c53eb0f862b56ec3dbe</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/ae9495692134b1c92cb5a40add13936a48dedda5">ae949569</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2020-09-13T15:57:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/6cfd87d6e281e3798cba6ac2919fec5cd58704e3">6cfd87d6</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2020-09-13T16:46:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Depend on python3-pulp << 2.0.
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
.github/workflows/main.yml
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<li class="file-stats">
<a href="#45267e3a9556cafa9cb7b61dab7a3b6659e73aad">
CHANGELOG.rst
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#2deeac294ac5d9dfbbf7dcfc6fa60d6a68a7da89">
debian/patches/0001-Use-the-inbuild-sphinx.ext.napoleon.patch
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<li class="file-stats">
<a href="#9a1d15e694f16dad7c25d39b40a3fbc27764a816">
debian/patches/0003-Compat-fix.patch
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<li class="file-stats">
<a href="#6cbb5336bfa272ad2629f5ab1fabba4240e2114e">
debian/patches/0008-remove_sphinx.ext.patch
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<li class="file-stats">
<a href="#3a60a3d8ad77c5d7b9f50f6d9e07887ec385a803">
debian/patches/local_javascript.patch
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<li class="file-stats">
<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
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<li class="file-stats">
<a href="#aef4fc475d9c2698d0de9e80b3256895c791f41e">
debian/patches/remove_ccbysa_snippets.patch
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<li class="file-stats">
<a href="#260fb267aa59c740952b443e87e306a192a8d82e">
debian/patches/workaround_sphinx_issue.patch
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<li class="file-stats">
<a href="#5026e4863ea12b5792ff52f548d70284c3c1a181">
docs/executing/cli.rst
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<a href="#7e143b2e3a88fc7b437114c03b2302f5afa981ec">
docs/executing/cloud.rst
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<li class="file-stats">
<a href="#d0153cac95479af9bfb99b746b633bc8255bb53a">
docs/index.rst
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<li class="file-stats">
<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<li class="file-stats">
<a href="#6e44c81569e59fa3a94e1cf4a660f38c9fe5ca24">
docs/tutorial/additional_features.rst
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<li class="file-stats">
<a href="#7f695df9a93bb6d2f47c562fd1282181e830528b">
docs/tutorial/basics.rst
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<li class="file-stats">
<a href="#93270ff2eb7f389db8b4ad6035cb96e4e1622227">
docs/tutorial/setup.rst
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<li class="file-stats">
<a href="#cf170f1aad8eab1ea8f50709422e4eae4ebaf604">
docs/tutorial/short.rst
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<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<li class="file-stats">
<a href="#be949de8c0e74a7737ba3be8743dda889e7d51bf">
snakemake/caching/hash.py
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<li class="file-stats">
<a href="#df4be91675a0ec494b4883d845ec77d630aa9b66">
snakemake/common.py
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<li class="file-stats">
<a href="#42300b585ee7e51f9c6cfad5a88cf8ed5c4bd8fa">
snakemake/cwl.py
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<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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<li class="file-stats">
<a href="#a8d87906134f355c097f5aed2ab6a5477ec364e0">
snakemake/deployment/singularity.py
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<li class="file-stats">
<a href="#f26ea241de6ff4cfc0be3675c4f2da7114bd889d">
snakemake/exceptions.py
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</li>
<li class="file-stats">
<a href="#7610d24f21cc1508e60687b4a0c7e940a75ca358">
snakemake/executors/__init__.py
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</ul>
<h5>The diff was not included because it is too large.</h5>
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