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GitLab
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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/bowtie">Debian Med / bowtie</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/5f4397be01b442d94f27718028ade4584b5409c1">5f4397be</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:16:20+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/c2770c3adb6f5305e4f8111fca81376b201af460">c2770c3a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:16:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.3.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/4065801b88d9bc05ac8ede62c643da729dc70d9c">4065801b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:16:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.3.0+dfsg'
Update to upstream version '1.3.0+dfsg'
with Debian dir 20f080e4af90eacc8eb27bd55bca58d227014117</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/659c21a4ec6d99acb3ff3d07f5ae92ce726a07f8">659c21a4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:16:37+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/86463987b612d993c025cb8d2cde1ccf916db231">86463987</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:16:37+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bowtie/-/commit/5944e054c3300c591655f0f33534952438cf10e6">5944e054</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-09-15T08:59:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches
</pre>
</li>
</ul>
<h4>17 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#f11fb3bba37e7060bedcd5895812b7c511c52651">
MANUAL
</a>
</li>
<li class="file-stats">
<a href="#465370da702349b6dcb3f9f2026872cad6877efa">
MANUAL.markdown
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
</a>
</li>
<li class="file-stats">
<a href="#b33892fbddeffc3368077b4904ad0b3d562a7312">
VERSION
</a>
</li>
<li class="file-stats">
<a href="#894f96a78f97aec6221bbcb89965e048f5157565">
aligner.h
</a>
</li>
<li class="file-stats">
<a href="#77b75b620362a0dc8d561c4113d9e17ddfe24e9b">
aligner_0mm.h
</a>
</li>
<li class="file-stats">
<a href="#20ed11367e167f76dc38070ba91852797b9a7f73">
aligner_1mm.h
</a>
</li>
<li class="file-stats">
<a href="#5fe8d88f67bf2c36d11ad73df4ffdb8031d1bd12">
aligner_23mm.h
</a>
</li>
<li class="file-stats">
<a href="#7b6c31b1313cefc194a5feab32f5aaf64e6633b6">
aligner_metrics.h
</a>
</li>
<li class="file-stats">
<a href="#0204639f676971e7606e2d02a9c91d68012844bf">
aligner_seed_mm.h
</a>
</li>
<li class="file-stats">
<a href="#23fe7d40df390744370c0e80c2bcc72a078c6b0a">
alphabet.cpp
</a>
</li>
<li class="file-stats">
<a href="#f20480bd22275c372d93bee8d208a2b7943b6485">
alphabet.h
</a>
</li>
<li class="file-stats">
<a href="#eba51e6758b5feffc5281842ec228af66bc72efe">
assert_helpers.h
</a>
</li>
<li class="file-stats">
<a href="#e191c0391da327eb1ec5e6fc038d21e22490613b">
<span class="deleted-file">
−
auto_array.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#83c6934099d9399554708d79b01933b82140fd54">
binary_sa_search.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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