<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Aaron M. Ucko pushed to branch master
at <a href="https://salsa.debian.org/med-team/ncbi-blastplus">Debian Med / ncbi-blastplus</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/69a135e401e5693c53a47545c943518fa22b2e27">69a135e4</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T20:50:10-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "Merge branch 'blastdbv4' into 'master'"
Fixed on the C++ side in #969608. This reverts commit
762364cedeed8cbf9ed6acc5d42e479ddcf72b48, reversing changes made to
e46881b79153db2f10891dbb81fef89844ba1ab8.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/0afa5b015ea8ee9024654442736912b8c99cc325">0afa5b01</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T20:57:21-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.10.1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/b30a72ccb509f8fc7c539ee3c93377d08576fcf5">b30a72cc</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T21:05:48-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge tag 'upstream/2.10.1' into master (#970344).
Upstream version 2.10.1. Among other changes, "fix tblastn mt issue".
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/801247a1a6af0f5436e6f29920cdcb6a9a09fd6a">801247a1</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T21:32:42-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debian/patches: Update existing patches for 2.10.1.
* {hurd_fixes,run_perl_directly}: Rebase.
* support_gcc10: Drop build-system portions, incorporated upstream as
of this release.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/e4a51877a570458908d209bdc3f69ed1b7ea8afd">e4a51877</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T21:32:42-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debian/patches/fix_x86isms: New.
Conditionally stub out CCpuFeatures::InstructionSet::InstructionSet,
which compiles only on x86.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/commit/ee76404c4d259633150617ed1652e06c40217a8a">ee76404c</a></strong>
<div>
<span>by Aaron M. Ucko</span>
<i>at 2020-09-19T21:32:42-04:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adjust default v5 map size even on 64-bit platforms (#969608).
debian/patches/tune_lmdb_defaults: Rename from tune_32bit_lmdb_defaults;
scale down somewhat even on 64-bit platforms to account for potential
use of qemu.
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#0e5e053c2d9c371f8f14d1f5451cc022b2dd1108">
c++/compilers/unix/ICC.sh
</a>
</li>
<li class="file-stats">
<a href="#141876a4fcece914596433ae996325c524d5b489">
c++/compilers/vs2015/protoc.bat
</a>
</li>
<li class="file-stats">
<a href="#a348681c1529cc2ac507c6932b97509a7eb69580">
c++/compilers/vs2017/check.sh
</a>
</li>
<li class="file-stats">
<a href="#72862893d6a740484624477448f7ba2b7e37052b">
c++/compilers/vs2017/protoc.bat
</a>
</li>
<li class="file-stats">
<a href="#6710ef2c83aeccf88014de95c2e56acd37a7a989">
c++/compilers/xcode30_prj/copybin.sh
</a>
</li>
<li class="file-stats">
<a href="#6e708e40b681d498c35c37d05bc76b659461cdae">
c++/compilers/xcode30_prj/datatool.sh
</a>
</li>
<li class="file-stats">
<a href="#c03a3ad9912b44f2ccd97cc8d31f49dca1ec466b">
c++/compilers/xcode30_prj/protoc.sh
</a>
</li>
<li class="file-stats">
<a href="#b006fe543d73bdb9616e6043bd20606dd98d9262">
c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp
</a>
</li>
<li class="file-stats">
<a href="#838b37bedece844b255aff0c4785e2906af0ea9f">
c++/include/algo/blast/api/version.hpp
</a>
</li>
<li class="file-stats">
<a href="#e9ecf57da762d9837ee8b739ce99b4550a263922">
c++/include/algo/blast/blastinput/blast_args.hpp
</a>
</li>
<li class="file-stats">
<a href="#cb31001edc6c3ef681469068e2d61121868a19ee">
c++/include/algo/blast/blastinput/blast_input_aux.hpp
</a>
</li>
<li class="file-stats">
<a href="#d329c1b777c99aef03a2d77cb72b46863c9c0519">
c++/include/algo/blast/blastinput/cmdline_flags.hpp
</a>
</li>
<li class="file-stats">
<a href="#aec77b894062c53c228ae3c1c1889d110047edc1">
c++/include/algo/blast/blastinput/magicblast_args.hpp
</a>
</li>
<li class="file-stats">
<a href="#8f86e462eccea9139f9efdc5ba0b752ab0685682">
c++/include/algo/blast/core/blast_hits.h
</a>
</li>
<li class="file-stats">
<a href="#13cf99c34e680ab84e8e18a9c3fb1c68bec498e2">
c++/include/algo/blast/core/blast_hspstream.h
</a>
</li>
<li class="file-stats">
<a href="#d409af14dc9ba393a6b9add318252c84ff348794">
c++/include/algo/blast/core/blast_seqsrc.h
</a>
</li>
<li class="file-stats">
<a href="#346298fddf48868af2e93d15ee39ba2ae26368dc">
c++/include/algo/blast/core/blast_traceback.h
</a>
</li>
<li class="file-stats">
<a href="#2006206a210d2e1a894e516220f6bf3943064aed">
c++/include/algo/blast/igblast/igblast.hpp
</a>
</li>
<li class="file-stats">
<a href="#dddc6a3adf6ad72e8ee003cba38729d1f83f4795">
c++/include/algo/winmask/seq_masker_istat.hpp
</a>
</li>
<li class="file-stats">
<a href="#72ba87984b6911417e2ff0e8105fe6b2f8bc27a2">
c++/include/cgi/cgi_exception.hpp
</a>
</li>
<li class="file-stats">
<a href="#00c3698f9425718344cf11f0c4ad0dd9142c9c98">
c++/include/cgi/cgiapp.hpp
</a>
</li>
<li class="file-stats">
<a href="#1f87ccdc077e11062b812c30c83dd37b9eae0741">
c++/include/cgi/ncbicgi.hpp
</a>
</li>
<li class="file-stats">
<a href="#a371a745f93854389646a81f2e8a981bb8fa5792">
c++/include/cgi/user_agent.hpp
</a>
</li>
<li class="file-stats">
<a href="#cee20a915c562e1448384f9580c65c968882e89f">
c++/include/common/config/ncbiconf_msvc.h
</a>
</li>
<li class="file-stats">
<a href="#6654c209d6fd0243a8b98560a6d7bb350c6a53a9">
c++/include/common/config/ncbiconf_xcode.h
</a>
</li>
<li class="file-stats">
<a href="#993800f5addb32f8e8a5c210fd1425ad1c88a595">
c++/include/common/ncbi_build_ver.h.in
</a>
</li>
<li class="file-stats">
<a href="#e502a7ab58a93c0511e6b062b960c3ca77da8c27">
c++/include/common/ncbi_export.h
</a>
</li>
<li class="file-stats">
<a href="#d415ca395528de26cd477de2f15803a43ff0f5f1">
c++/include/common/ncbi_package_ver.h
</a>
</li>
<li class="file-stats">
<a href="#2695bb0211258faa171c645c6d3c2e6ddaaa155a">
c++/include/common/ncbi_revision.h.in
</a>
</li>
<li class="file-stats">
<a href="#b80c20ff727c6c67d4c6d4d3e1231c024e39491e">
c++/include/common/ncbi_source_ver.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/ncbi-blastplus/-/compare/762364cedeed8cbf9ed6acc5d42e479ddcf72b48...ee76404c4d259633150617ed1652e06c40217a8a">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>