<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/samtools">Debian Med / samtools</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/9755953388ff145067ee387d865d5e67aded5b18">97559533</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T15:54:29+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/eaf4eea97cf035b7f4739d5efb90ce9a258fe967">eaf4eea9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T15:54:30+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.11</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/99fb47839174f2705e9ba4070b7f628dfdae2e52">99fb4783</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T15:54:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.11'
Update to upstream version '1.11'
with Debian dir 69670b13b9a616812f79f8edb27ef10387e05d13</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/be2dde947b976eeb48809d855a010f200b6778c7">be2dde94</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T15:56:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop spelling patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/0ca30e0025921f55d45231c836f48f83ec0a8bd4">0ca30e00</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T16:04:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Versioned Build-Depends: libhts-dev (>= 1.11)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/samtools/-/commit/cc518eba11578c569c34adadf811802dc8259f94">cc518eba</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-01T16:09:46+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">TODO: Clarify autopkgtest error
</pre>
</li>
</ul>
<h4>18 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
</a>
</li>
<li class="file-stats">
<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
README
</a>
</li>
<li class="file-stats">
<a href="#a8c86a0fd0345dc5d362ba470fff0ab9a0fc7f1b">
<span class="new-file">
+
amplicon_stats.c
</span>
</a>
</li>
<li class="file-stats">
<a href="#76b53251c8199ebcc9af3230a5705ae8429c996a">
bam.c
</a>
</li>
<li class="file-stats">
<a href="#1bb0ee14ea54633c87c40fe410d73790a19569d2">
bam.h
</a>
</li>
<li class="file-stats">
<a href="#47e9e5b41a99db7f29a9c389319288b5be3dd44d">
bam2depth.c
</a>
</li>
<li class="file-stats">
<a href="#a795d2efa11b7c958434d4db488733d129354980">
bam_addrprg.c
</a>
</li>
<li class="file-stats">
<a href="#49977dcd2454890ef52ad55cab2161e1108da37c">
<span class="new-file">
+
bam_ampliconclip.c
</span>
</a>
</li>
<li class="file-stats">
<a href="#5d92784e8cc871e26c7833421c96fb4c112cf954">
<span class="new-file">
+
bam_ampliconclip.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#e234206ac144634fb441b03b025114103cbc982c">
bam_aux.c
</a>
</li>
<li class="file-stats">
<a href="#48dd9aebbe92625a76a15f89970088933a5fa30c">
bam_color.c
</a>
</li>
<li class="file-stats">
<a href="#1b031362756348a3fc06a80a67e2440c22c1f4ad">
bam_fastq.c
</a>
</li>
<li class="file-stats">
<a href="#89a03e702f4bc3e36cdfde2781a3be558535682e">
bam_markdup.c
</a>
</li>
<li class="file-stats">
<a href="#d4bc32e2570b26508c2d81d71d23edbaaec16180">
bam_mate.c
</a>
</li>
<li class="file-stats">
<a href="#4fc4365483305125a81f12902c48a4deca801439">
bam_md.c
</a>
</li>
<li class="file-stats">
<a href="#a933ca350aef7d0983a7c7029f2ef5b529f89ea5">
bam_plcmd.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/samtools/-/compare/ae79f5788c56a890c8582c099b0227e1028e2a9c...cc518eba11578c569c34adadf811802dc8259f94">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>