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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/rna-star">Debian Med / rna-star</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/516656545df18cad58bce67876f8ea10113b6b54">51665654</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-02T14:49:25+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/ababb9e70de3862cdd3b1353d0c26b48130eaf70">ababb9e7</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-02T14:49:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.7.6a+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/5cd05917766fce1093bb5938f12e99977c7e1f92">5cd05917</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-02T14:49:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.7.6a+dfsg'
Update to upstream version '2.7.6a+dfsg'
with Debian dir 01da50efb2521b8e9da70f75b69c0a65ba740532</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/28a40c503b0a654b3c5a42399228454d01e913ce">28a40c50</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-02T14:53:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e">
CHANGES.md
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#fb1b39277cfb15327cea71551d0bbf7643e216f4">
RELEASEnotes.md
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#1d6ebb42152a3125296c8f3df8bc34651da72448">
doc/STARmanual.pdf
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<li class="file-stats">
<a href="#5a5668ccb427693fe0e7ea2e054229206cb91b0a">
extras/doc-latex/STARmanual.tex
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<li class="file-stats">
<a href="#8955c7301dc01c7f9b2a350f2aee6066e91f8f83">
extras/docker/Dockerfile
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<li class="file-stats">
<a href="#05aaea645830f1788b63f5f6c2c90809c8837dee">
source/BAMfunctions.cpp
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<li class="file-stats">
<a href="#17ef85fa9dc8f604b874c27ab2bc5d31a69f0d6d">
source/ChimericAlign.cpp
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<li class="file-stats">
<a href="#a6ffa0e1a002e87767829734d1828c550173c14f">
source/ChimericAlign.h
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<li class="file-stats">
<a href="#30ab53827d7d7caed59d72d5bb914a74c2e6f333">
<span class="new-file">
+
source/ChimericAlign_chimericBAMoutput.cpp
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<li class="file-stats">
<a href="#40b7d10e4645dc6ae30e5830f3b8abe35c537374">
source/ChimericDetection.h
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<li class="file-stats">
<a href="#e6c66b50a9609f09ee3fe8ac72c75014ae38c1ff">
source/ChimericDetection_chimericDetectionMult.cpp
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<li class="file-stats">
<a href="#6ae9e88712056a2abd55911f4d3a7d8b8145819c">
source/Makefile
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<li class="file-stats">
<a href="#6e7e9199db44be8b0f606c7c21db10763fc8b0eb">
source/Parameters.cpp
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<li class="file-stats">
<a href="#09b38547a28087b813616bd2a7334493c3862c48">
source/Parameters.h
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<li class="file-stats">
<a href="#f09ea75b8243d42eee54c10d49465997ac00609f">
source/ParametersChimeric_initialize.cpp
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<li class="file-stats">
<a href="#cede17459d086a5e7ad5b0dbcfff22b4e4861435">
<span class="new-file">
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source/Parameters_samAttributes.cpp
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<li class="file-stats">
<a href="#238ae46f3e2ae6c05a1eca3f159a54222230394e">
source/ReadAlign.h
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<li class="file-stats">
<a href="#0f351bd6f52ff0c9ab03a4771ab917025e709afc">
source/ReadAlignChunk.cpp
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<li class="file-stats">
<a href="#764c3cfc36fad2f293fd356112b8836ea61e0b02">
source/ReadAlign_alignBAM.cpp
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<li class="file-stats">
<a href="#af060c7d950c0018c9102e5f40dcb6ce74317aa8">
source/ReadAlign_chimericDetection.cpp
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<li class="file-stats">
<a href="#e567212bd90532effae5cceb340251e161d1e96e">
source/ReadAlign_chimericDetectionOldOutput.cpp
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<li class="file-stats">
<a href="#32c87d85b8e6a7f392241db417a7cd034f3e79d7">
source/ReadAlign_chimericDetectionPEmerged.cpp
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<li class="file-stats">
<a href="#38255560373004439a41922897da553297a784d2">
source/ReadAlign_outputAlignments.cpp
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<li class="file-stats">
<a href="#d938845d26281b751fbd64471e18f13e3c550aa8">
source/ReadAlign_outputTranscriptSAM.cpp
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<li class="file-stats">
<a href="#188667251bde9bacea8550ecde93b515b078a8a4">
source/ReadAlign_peOverlapMergeMap.cpp
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<li class="file-stats">
<a href="#2ce04271e5214fcd449bb4917e94be04695c6534">
source/SoloFeature_cellFiltering.cpp
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<li class="file-stats">
<a href="#afd85a07c3f509b173703f2140b578a707ada9e6">
source/Transcript.h
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<li class="file-stats">
<a href="#eef122fda3a846cd84614a07011c0a84a375639b">
source/Transcript_alignScore.cpp
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</ul>
<h5>The diff was not included because it is too large.</h5>
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