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<h3>
Michael R. Crusoe pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/picard-tools">Debian Med / picard-tools</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/picard-tools/-/commit/0f15f091179ae79b5d32de3d048800e88cf44b05">0f15f091</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-14T11:58:03+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.23.7+dfsg</pre>
</li>
</ul>
<h4>15 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4">
Dockerfile
</a>
</li>
<li class="file-stats">
<a href="#6909ff640be7be2de90d276c91938e5bcd21a003">
build_push_docker.sh
</a>
</li>
<li class="file-stats">
<a href="#3a02115cc24686ccecd94ec7f340c5890a553d38">
src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java
</a>
</li>
<li class="file-stats">
<a href="#1fa2570ced8b3c33e4b3bd1f563ab3786ec64e29">
src/main/java/picard/cmdline/CommandLineProgram.java
</a>
</li>
<li class="file-stats">
<a href="#b8553f759ce8bc72a7ed6f6994097c2fc323b375">
src/main/java/picard/fingerprint/FingerprintChecker.java
</a>
</li>
<li class="file-stats">
<a href="#87cdeb4d4b2d5d5f8a0e9c7a523936565c36e141">
src/main/java/picard/sam/AbstractAlignmentMerger.java
</a>
</li>
<li class="file-stats">
<a href="#d7e1eb1d5142d7f5e0ed5760254a640075f59bc3">
src/main/java/picard/sam/DownsampleSam.java
</a>
</li>
<li class="file-stats">
<a href="#192759cddd7a04a212bb94980e062008ad977e97">
src/main/java/picard/util/IntervalListTools.java
</a>
</li>
<li class="file-stats">
<a href="#c36fb766f4304ff815fcc6e04602b7de53b60e1a">
src/test/java/picard/analysis/CollectAlignmentSummaryMetricsTest.java
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</li>
<li class="file-stats">
<a href="#de1fac0f646ef92df9791212e9b23270edcf0c08">
<span class="new-file">
+
src/test/java/picard/pedigree/SexTest.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#5ad8fc5419284b4fabb2c48d2b90bf25c972606f">
src/test/java/picard/sam/AbstractAlignmentMergerTest.java
</a>
</li>
<li class="file-stats">
<a href="#87eb96dd4278db070a5194dd635e14c6a00916bc">
src/test/java/picard/sam/DownsampleSamTest.java
</a>
</li>
<li class="file-stats">
<a href="#c3b4f3a7e3e36a48d94fc22bf28aa14b5d8a579e">
src/test/java/picard/sam/MergeBamAlignmentTest.java
</a>
</li>
<li class="file-stats">
<a href="#49c1cbf60587a991ee6ceb695512094cb3c765e9">
src/test/java/picard/util/IntervalListToolsTest.java
</a>
</li>
<li class="file-stats">
<a href="#89b0b2bc2e1f2d44d307359fed0149e0f811460d">
<span class="new-file">
+
testdata/picard/sam/MergeBamAlignment/indel_reads_aligned.sam
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
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