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<h3>
Nilesh Patra pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/bbmap">Debian Med / bbmap</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bbmap/-/commit/4a48500e5d36946f767ddd40cff94a4ba7d07c64">4a48500e</a></strong>
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<span>by Nilesh Patra</span>
<i>at 2020-10-16T18:38:05+05:30</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 38.87+dfsg</pre>
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<h4>26 changed files:</h4>
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#61cf421f1524d6f40443ea18a67da6045ca09a79">
callvariants.sh
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<li class="file-stats">
<a href="#97374777fdd636ad09fbf33ffcabca13814369d3">
current/align2/MSA.java
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<li class="file-stats">
<a href="#d5c1a631c989a9caee4d526a09f041c274bf8dcd">
current/hmm/HMMSearchLine.java
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<a href="#a91d4178e0aff68ff42305b13ed8167bc43f69dd">
current/hmm/HMMSearchReport.java
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<a href="#c9b9f7c8e68a5206e562548d274344ae0cc61d64">
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current/hmm/ProteinSummary.java
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<li class="file-stats">
<a href="#87e09ce245832e04b8a3d06edd667cfac9295e33">
current/icecream/IceCreamFinder.java
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<a href="#584d71555da7055b365c712c54178c37c6ec66e7">
current/icecream/IceCreamMaker.java
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<a href="#b535deb381b48e8b550afafea53c094999335a10">
current/icecream/ReformatPacBio.java
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<a href="#d25cfb3f5a00a54a1141825bc154a7ea2aa7b539">
current/icecream/ZMW.java
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<a href="#d4f7926b33d9833d67b2129ab02e68859ef8da23">
current/icecream/ZMWStreamer.java
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current/jasper/Comparison.java
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current/jasper/DenseSimilarityMatrix.java
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current/jasper/DenseTree.java
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current/jasper/DenseTreeValidate.java
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current/jasper/NCBIComparison.java
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current/jasper/NCBISparseSimilarityMatrix.java
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current/jasper/NCBISparseTree.java
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current/jasper/NCBISparseTreeValidate.java
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current/jasper/NCBITreeNode.java
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current/jasper/Organism.java
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current/jasper/SimilarityMatrix.java
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current/jasper/SparseSimilarityMatrix.java
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current/jasper/SparseTree.java
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current/jasper/SparseTreeValidate.java
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current/jasper/TaxCompare.java
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<h5>The diff was not included because it is too large.</h5>
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