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<h3>
Andrei Rozanski pushed to branch master
at <a href="https://salsa.debian.org/med-team/agat">Debian Med / agat</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/agat/-/commit/a488d81b376c6f163fee50c48a2c7ef8ce2975ef">a488d81b</a></strong>
<div>
<span>by Andrei Rozanski</span>
<i>at 2020-10-19T18:46:04+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add manpages and copyright. Fixed d/rules, d/control and d/install
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#68d8c5c6babbf5cf109b2584c454449dbff75772">
<span class="new-file">
+
debian/install
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</li>
<li class="file-stats">
<a href="#bd5cbd3be95d3399947c32861d1e5beef44cd962">
<span class="new-file">
+
debian/man/agat_convert_bed2gff.pl.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#4d263711d3e747a84cab34ae823fe7340550f0d6">
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+
debian/man/agat_convert_embl2gff.pl.1
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</li>
<li class="file-stats">
<a href="#1c40fba641f62296a89b115b3e75788b3184f731">
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+
debian/man/agat_convert_genscan2gff.pl.1
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<li class="file-stats">
<a href="#05a7b346faca2e3f86c3c8faa0af5d28a4ce1e68">
<span class="new-file">
+
debian/man/agat_convert_mfannot2gff.pl.1
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<li class="file-stats">
<a href="#39e71b292b81d10fb304d9428ea477b8e618387f">
<span class="new-file">
+
debian/man/agat_convert_minimap2_bam2gff.pl.1
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</li>
<li class="file-stats">
<a href="#248838dcf207d902d47b3bc151e07751ff0c91ae">
<span class="new-file">
+
debian/man/agat_convert_sp_gff2bed.pl.1
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<li class="file-stats">
<a href="#518d45c1478f28f51dcb033879b4dd6ae8e6037f">
<span class="new-file">
+
debian/man/agat_convert_sp_gff2gtf.pl.1
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<li class="file-stats">
<a href="#2bbd8a386f9a677e9fc7ca72494fe9e0fd550fdd">
<span class="new-file">
+
debian/man/agat_convert_sp_gff2tsv.pl.1
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<li class="file-stats">
<a href="#fd88337a89a73d80ccd67a37ebc83bcf952a3f3a">
<span class="new-file">
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debian/man/agat_convert_sp_gff2zff.pl.1
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<li class="file-stats">
<a href="#731eb7f784c299f58bb61d358ab9a928667c6d90">
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debian/man/agat_convert_sp_gxf2gxf.pl.1
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<li class="file-stats">
<a href="#db28d2c30f0eaef8ed771838f159842dab3cef45">
<span class="new-file">
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debian/man/agat_sp_Prokka_inferNameFromAttributes.pl.1
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<li class="file-stats">
<a href="#76f38a2a776bad6c06eb030dcb1752a1d240f101">
<span class="new-file">
+
debian/man/agat_sp_add_introns.pl.1
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<li class="file-stats">
<a href="#35a45b46f859089f912e081c3233d9831d7fffd9">
<span class="new-file">
+
debian/man/agat_sp_add_start_and_stop.pl.1
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<li class="file-stats">
<a href="#41478f88e13ee4363413eed968aa35aaddae4b28">
<span class="new-file">
+
debian/man/agat_sp_alignment_output_style.pl.1
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<li class="file-stats">
<a href="#34d50d2274975b8b1555b799883aa0ea855a0680">
<span class="new-file">
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debian/man/agat_sp_clipN_seqExtremities_and_fixCoordinates.pl.1
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<li class="file-stats">
<a href="#dbf3ff6d9a5612e572dc0834aea993bbd3e88e14">
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debian/man/agat_sp_compare_two_BUSCOs.pl.1
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<li class="file-stats">
<a href="#01b6ee6961c13a4deba541da4539b054449115a4">
<span class="new-file">
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debian/man/agat_sp_compare_two_annotations.pl.1
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<li class="file-stats">
<a href="#be3086063daad3f12519059aa3a2b6049a9d634a">
<span class="new-file">
+
debian/man/agat_sp_complement_annotations.pl.1
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<li class="file-stats">
<a href="#294b46caa77c561defbd03b3c25ebe78bd9da50c">
<span class="new-file">
+
debian/man/agat_sp_ensembl_output_style.pl.1
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</a>
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<li class="file-stats">
<a href="#960f52b3b374a49696903611165feb96cc7c16d7">
<span class="new-file">
+
debian/man/agat_sp_extract_attributes.pl.1
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<li class="file-stats">
<a href="#50e6efb8b0b4c9b1bd8bcc0aa2c1d32e06bb2cd2">
<span class="new-file">
+
debian/man/agat_sp_extract_sequences.pl.1
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<li class="file-stats">
<a href="#0c3d2568882f6ceac60f7bd0f6ebd16fc8a51f03">
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+
debian/man/agat_sp_filter_by_ORF_size.pl.1
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<li class="file-stats">
<a href="#bd4931c90fead4e8a8ed7ef0e3228bc458b3b542">
<span class="new-file">
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debian/man/agat_sp_filter_by_locus_distance.pl.1
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</li>
<li class="file-stats">
<a href="#9489db73baad17c44b763034692957be996dd95b">
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debian/man/agat_sp_filter_by_mrnaBlastValue.pl.1
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<li class="file-stats">
<a href="#a37c8e84ba5d17a5fa022fe951536fa05f0ff666">
<span class="new-file">
+
debian/man/agat_sp_filter_feature_by_attribute_presence.pl.1
</span>
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</li>
<li class="file-stats">
<a href="#0939a621661f51f1e06d3fd2b8244135ec1d3536">
<span class="new-file">
+
debian/man/agat_sp_filter_feature_by_attribute_value.pl.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#d5569827ffb363cee52f0d519b00e4ee8f8eb2be">
<span class="new-file">
+
debian/man/agat_sp_filter_feature_from_kill_list.pl.1
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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