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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a27a6232ca0464073a22732562fc10bb54affcc4">a27a6232</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-10-29T13:45:35+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a27a6232ca0464073a22732562fc10bb54affcc4#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 29 Oct 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 29 Oct 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">9</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">7</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">8</span> | {practice,covid-19,his,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">6</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">5</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">7</span> | {practice,covid-19,his,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> gdcm | 41 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> dicomscope | 36 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> htsjdk | 35 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> dicom3tools | 33 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> dicomscope | 33 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> dcm2niix | 23 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> gdcm | 18 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dicom3tools | 34 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> dcm2niix | 24 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> gdcm | 19 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> gnumed-server | 18 | {practice,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gdcm | 16 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> biosig | 15 | {imaging,physics} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> ngs-sdk | 15 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> invesalius | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> minc-tools | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> pixelmed | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> nifticlib | 13 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> biosig | 16 | {imaging,physics} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> gdcm | 15 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> minc-tools | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> pixelmed | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> ngs-sdk | 14 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> nifticlib | 14 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> king | 11 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> ngs-sdk | 11 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> openslide | 11 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> plastimatch | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> adun.app | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> king | 10 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> nifticlib | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> openslide | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> plastimatch | 10 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> vtk-dicom | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> insighttoolkit4 | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> librg-utils-perl | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> obitools | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> <span class="idiff left right">vtk-dicom | 9 | {imaging} </span> | </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> <span class="idiff left right">dicompyler | 8 | {oncology}</span> | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> melting | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> dicompyler | 7 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> ea-utils | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> orthanc-webviewer | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> staden | 7 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -38,6 +38,7 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> biomaj3-cli | 6 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> jebl2 | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> multiqc | 6 | {covid-19,bio} | </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> ngs-sdk | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> predictprotein | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> pymia | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> treeview | 6 | {bio,bio-phylogeny} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -46,7 +47,7 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> lagan | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> libminc | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> mipe | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext"> <span class="idiff left right">ngs-sdk | 5 | {bio-dev} </span> | </span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> <span class="idiff left right">orthanc-dicomweb | 5 | {covid-19,imaging}</span> | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> salmon | 5 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> sibsim4 | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> stacks | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -69,7 +70,6 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> lamarc | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> libncl | 4 | {bio} | </span>
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72
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> mrs | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="plaintext"> orthanc-dicomweb | 4 | {covid-19,imaging} | </span>
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73
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> phast | 4 | {bio} | </span>
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74
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74
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> phybin | 4 | {bio} | </span>
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75
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> phyutility | 4 | {cloud,bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -127,6 +127,7 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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127
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127
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="plaintext"> atropos | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> canu | 2 | {bio} | </span>
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129
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129
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> cat-bat | 2 | {bio,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext"> ctn | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> emmax | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> ipig | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> jmodeltest | 2 | {bio,bio-phylogeny} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -152,7 +153,6 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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152
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> blasr | 1 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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155
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> bustools | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext"> ctn | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> cufflinks | 1 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="plaintext"> dextractor | 1 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="plaintext"> embassy-phylip | 1 | {bio,cloud} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -186,7 +186,6 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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186
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> concurrentqueue | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="plaintext"> conda-package-handling | 0 | {bio,bio-dev} | </span>
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190
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> emboss-explorer | 0 | {bio} | </span>
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191
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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192
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -246,5 +245,5 @@ Last-Update: Thu, 29 Oct 2020 01:42:04 +0000</td>
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245
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="plaintext"> orthanc-python | -1 | {covid-19} | </span>
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247
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<pre style="margin: 0;"> <span id="LC246" class="line" lang="plaintext"> shovill | -1 | {bio,covid-19} | </span>
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248
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="plaintext"> svim | -1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="plaintext">(27<span class="idiff left right">4</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="plaintext">(27<span class="idiff left right">3</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="plaintext"></span></pre>
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