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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/libvcflib">Debian Med / libvcflib</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/ce9aabfd1598c2c263d231067f432ce5771dc624">ce9aabfd</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">adjust inclusion of the packaged SmithWatermanGotoh.h
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/2854c4767c481c02335288e8a735af443d4a9402">2854c476</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/8edcc2be817a50e99aab9a29f877b35c4d65c4a2">8edcc2be</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/2005009c3c001cd6903842d91a8ddace3308ed6c">2005009c</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:52+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/575794716e9550b86f66c3ffd9deacf28783d04e">57579471</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:52+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/d038923c23f90a0fff567108d1c24577025cfa98">d038923c</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:06:56+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/c87dd12d5c6411936e3628c2e103da93f0abad22">c87dd12d</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:41:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patch headers.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libvcflib/-/commit/cbb46c4e6719e4c9706ce9432f6313dd5f610021">cbb46c4e</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-10-31T18:53:08+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">IntervalTree.h patch is no longer needed
</pre>
</li>
</ul>
<h4>20 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#2145284f631e023887e138b27ea804ba59a4541b">
<span class="deleted-file">
−
debian/include/IntervalTree.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#c99edf3687f92ddaeb98b563e4f5489c663bf73c">
debian/patches/crossbuild
</a>
</li>
<li class="file-stats">
<a href="#1358302e96d0d2aa4233e79862aeedd6f8dfd25b">
debian/patches/disorder_include
</a>
</li>
<li class="file-stats">
<a href="#0ba8c24deb72a65ea9a4a10047438d627bdd1496">
debian/patches/dont_link_pthread
</a>
</li>
<li class="file-stats">
<a href="#ea7bb8863c58f94a4fb117eb619181c1190e9d35">
debian/patches/fix_ssw_cpp_header_name.patch
</a>
</li>
<li class="file-stats">
<a href="#3db93006c999daaa652555ee5b093f17a4858e39">
debian/patches/hardening-flags
</a>
</li>
<li class="file-stats">
<a href="#8390ecfcfabfca8e83a5a8d931f22f0bf446f807">
<span class="deleted-file">
−
debian/patches/intervaltree.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#379a35dfe7ea627e49b9204c1c9794c5dc088a38">
debian/patches/no_fsom
</a>
</li>
<li class="file-stats">
<a href="#09ca7123b01710278d1911e3f5847900e5af3f8d">
debian/patches/no_libVCFH
</a>
</li>
<li class="file-stats">
<a href="#527fffe3980c2be33244c74ec2cfc7a6a95e92cf">
debian/patches/override_version
</a>
</li>
<li class="file-stats">
<a href="#9282af4050bfc4ccfdc58b03281755547772cffa">
debian/patches/pkg-config.patch
</a>
</li>
<li class="file-stats">
<a href="#5dd3e65e8bf2a49f7e8db4bc4087719b91091f7c">
debian/patches/shared_lib.patch
</a>
</li>
<li class="file-stats">
<a href="#f73c14546ec70508e3c3d3efcb88f0ebad9f1f73">
debian/patches/use_debian_packaged_fastahack.patch
</a>
</li>
<li class="file-stats">
<a href="#e847dec435c3030822de2161ab48d6c5b17c318d">
debian/patches/use_debian_packaged_libssw.patch
</a>
</li>
<li class="file-stats">
<a href="#947e072c91575647e20c8e6e1b441e13fbe6fe5b">
debian/patches/use_debian_packaged_smithwaterman.patch
</a>
</li>
<li class="file-stats">
<a href="#2026da8936a56f81ff5288c425be00e819243775">
debian/patches/use_debian_packaged_tabixpp.patch
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">libvcflib (1.0.1+dfsg-4) UNRELEASED; urgency=medium</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * debian/patches/use_debian_packaged_smithwaterman.patch: adjust</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> inclusion of the packaged</span>
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<td class="diff-line-num new new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> /usr/include/smithwaterman/SmithWatermanGotoh.h</span>
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<td class="diff-line-num new new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Standards-Version: 4.5.0 (routine-update)</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Add salsa-ci file (routine-update)</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> Repository-Browse.</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * Update patch headers.</span>
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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> * IntervalTree.h patch is no longer needed</span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> -- Michael R. Crusoe <crusoe@debian.org> Sat, 31 Oct 2020 18:05:41 +0100</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">libvcflib (1.0.1+dfsg-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> * Team upload.</span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,7 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Uploaders: Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">2</span>),</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">3</span>),</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> dh-exec,</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> markdown <!nodoc>,</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> libtabixpp-dev,</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,10 +14,11 @@ Build-Depends: debhelper-compat (= 12),</td>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> libfastahack-dev (>= 0.0+git20160702.bbc645f+dfsg-5~),</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> pkg-config,</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> libipc-run3-perl <!nocheck></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">4.1</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5.0</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/libvcflib</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/libvcflib.git</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Homepage: https://github.com/vcflib/vcflib</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">Package: libvcflib1</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Architecture: any</span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#2145284f631e023887e138b27ea804ba59a4541b"><strong>debian/include/IntervalTree.h</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#ifndef __INTERVAL_TREE_H</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#define __INTERVAL_TREE_H</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <vector></span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <algorithm></span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <iostream></span></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <memory></span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <cassert></span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#ifdef USE_INTERVAL_TREE_NAMESPACE</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="cpp"><span class="k" style="font-weight: 600;">namespace</span> <span class="n" style="color: #333;">interval_tree</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#endif</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Scalar</span><span class="p">,</span> <span class="k" style="font-weight: 600;">typename</span> <span class="nc" style="color: #458; font-weight: 600;">Value</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Interval</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="cpp"><span class="nl">public:</span></span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">start</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">stop</span><span class="p">;</span></span>
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18
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="cpp"> <span class="n" style="color: #333;">Value</span> <span class="n" style="color: #333;">value</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="cpp"> <span class="n" style="color: #333;">Interval</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">s</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">e</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Value</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">v</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">start</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">,</span> <span class="n" style="color: #333;">e</span><span class="p">))</span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="cpp"> <span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">max</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">,</span> <span class="n" style="color: #333;">e</span><span class="p">))</span></span>
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22
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="cpp"> <span class="p">,</span> <span class="n" style="color: #333;">value</span><span class="p">(</span><span class="n" style="color: #333;">v</span><span class="p">)</span> </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="cpp"> <span class="p">{}</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Scalar</span><span class="p">,</span> <span class="k" style="font-weight: 600;">typename</span> <span class="nc" style="color: #458; font-weight: 600;">Value</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="cpp"><span class="n" style="color: #333;">Value</span> <span class="n" style="color: #333;">intervalStart</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Interval</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span><span class="n" style="color: #333;">Value</span><span class="o" style="font-weight: 600;">>&</span> <span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">i</span><span class="p">.</span><span class="n" style="color: #333;">start</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="cpp"><span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Scalar</span><span class="p">,</span> <span class="k" style="font-weight: 600;">typename</span> <span class="nc" style="color: #458; font-weight: 600;">Value</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="cpp"><span class="n" style="color: #333;">Value</span> <span class="n" style="color: #333;">intervalStop</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Interval</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Value</span><span class="o" style="font-weight: 600;">>&</span> <span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">i</span><span class="p">.</span><span class="n" style="color: #333;">stop</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="cpp"><span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Scalar</span><span class="p">,</span> <span class="k" style="font-weight: 600;">typename</span> <span class="nc" style="color: #458; font-weight: 600;">Value</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="cpp"><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="k" style="font-weight: 600;">operator</span><span class="o" style="font-weight: 600;"><<</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">out</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Interval</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Value</span><span class="o" style="font-weight: 600;">>&</span> <span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="cpp"> <span class="n" style="color: #333;">out</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"Interval("</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">i</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">", "</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">i</span><span class="p">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"): "</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">i</span><span class="p">.</span><span class="n" style="color: #333;">value</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">out</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="cpp"><span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="cpp"><span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Scalar</span><span class="p">,</span> <span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Value</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="cpp"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">IntervalTree</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="cpp"><span class="nl">public:</span></span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">typedef</span> <span class="n" style="color: #333;">Interval</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Value</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">interval</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">typedef</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">vector</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">interval_vector</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">struct</span> <span class="nc" style="color: #458; font-weight: 600;">IntervalStartCmp</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="k" style="font-weight: 600;">operator</span><span class="p">()(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">a</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">b</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">a</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">b</span><span class="p">.</span><span class="n" style="color: #333;">start</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="cpp"> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">struct</span> <span class="nc" style="color: #458; font-weight: 600;">IntervalStopCmp</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="k" style="font-weight: 600;">operator</span><span class="p">()(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">a</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">b</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">a</span><span class="p">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">b</span><span class="p">.</span><span class="n" style="color: #333;">stop</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="cpp"> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">left</span><span class="p">(</span><span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="cpp"> <span class="p">,</span> <span class="n" style="color: #333;">right</span><span class="p">(</span><span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="cpp"> <span class="p">,</span> <span class="n" style="color: #333;">center</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="cpp"> <span class="p">{}</span></span>
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">~</span><span class="n" style="color: #333;">IntervalTree</span><span class="p">()</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">default</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="cpp"></span>
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69
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">unique_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">clone</span><span class="p">()</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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70
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">unique_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">></span><span class="p">(</span><span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="k" style="font-weight: 600;">this</span><span class="p">));</span></span>
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="cpp"></span>
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73
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">other</span><span class="p">)</span></span>
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74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">intervals</span><span class="p">(</span><span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">intervals</span><span class="p">),</span></span>
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75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="cpp"> <span class="n" style="color: #333;">left</span><span class="p">(</span><span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">left</span> <span class="o" style="font-weight: 600;">?</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">clone</span><span class="p">()</span> <span class="o" style="font-weight: 600;">:</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">),</span></span>
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76
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="cpp"> <span class="n" style="color: #333;">right</span><span class="p">(</span><span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">right</span> <span class="o" style="font-weight: 600;">?</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">clone</span><span class="p">()</span> <span class="o" style="font-weight: 600;">:</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">),</span></span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="cpp"> <span class="n" style="color: #333;">center</span><span class="p">(</span><span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">center</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="cpp"> <span class="p">{}</span></span>
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79
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="cpp"></span>
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80
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="k" style="font-weight: 600;">operator</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&&</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">default</span><span class="p">;</span></span>
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81
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&&</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">default</span><span class="p">;</span></span>
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82
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="cpp"></span>
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83
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="k" style="font-weight: 600;">operator</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">other</span><span class="p">)</span> <span class="p">{</span></span>
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84
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="cpp"> <span class="n" style="color: #333;">center</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">center</span><span class="p">;</span></span>
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85
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="cpp"> <span class="n" style="color: #333;">intervals</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">intervals</span><span class="p">;</span></span>
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86
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="cpp"> <span class="n" style="color: #333;">left</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">left</span> <span class="o" style="font-weight: 600;">?</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">clone</span><span class="p">()</span> <span class="o" style="font-weight: 600;">:</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="cpp"> <span class="n" style="color: #333;">right</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">right</span> <span class="o" style="font-weight: 600;">?</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">clone</span><span class="p">()</span> <span class="o" style="font-weight: 600;">:</span> <span class="nb" style="color: #0086b3;">nullptr</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;">*</span><span class="k" style="font-weight: 600;">this</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="cpp"></span>
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91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span></span>
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92
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<pre style="margin: 0;">-<span id="LC92" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span><span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">ivals</span><span class="p">,</span></span>
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93
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span> <span class="n" style="color: #333;">depth</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">16</span><span class="p">,</span></span>
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94
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span> <span class="n" style="color: #333;">minbucket</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">64</span><span class="p">,</span></span>
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95
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span> <span class="n" style="color: #333;">maxbucket</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">512</span><span class="p">,</span> </span>
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96
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<pre style="margin: 0;">-<span id="LC96" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">leftextent</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span></span>
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97
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">rightextent</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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98
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<pre style="margin: 0;">-<span id="LC98" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">left</span><span class="p">(</span><span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span></span>
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99
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<pre style="margin: 0;">-<span id="LC99" class="line" lang="cpp"> <span class="p">,</span> <span class="n" style="color: #333;">right</span><span class="p">(</span><span class="nb" style="color: #0086b3;">nullptr</span><span class="p">)</span></span>
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100
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="cpp"> <span class="p">{</span></span>
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101
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<pre style="margin: 0;">-<span id="LC101" class="line" lang="cpp"> <span class="o" style="font-weight: 600;">--</span><span class="n" style="color: #333;">depth</span><span class="p">;</span></span>
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102
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">minmaxStop</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">minmax_element</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> </span>
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103
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<pre style="margin: 0;">-<span id="LC103" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalStopCmp</span><span class="p">());</span></span>
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104
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">minmaxStart</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">minmax_element</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> </span>
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105
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">());</span></span>
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106
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<pre style="margin: 0;">-<span id="LC106" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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107
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="cpp"> <span class="n" style="color: #333;">center</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">(</span><span class="n" style="color: #333;">minmaxStart</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">minmaxStop</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">stop</span><span class="p">)</span> <span class="o" style="font-weight: 600;">/</span> <span class="mi" style="color: #099;">2</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC108" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">leftextent</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">rightextent</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// sort intervals by start</span></span>
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111
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">sort</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">());</span></span>
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112
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<pre style="margin: 0;">-<span id="LC112" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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113
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="cpp"> <span class="n" style="color: #333;">assert</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">is_sorted</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">()));</span></span>
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114
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="cpp"> <span class="p">}</span></span>
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115
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">depth</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span> <span class="o" style="font-weight: 600;">||</span> <span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">()</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">minbucket</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">()</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">maxbucket</span><span class="p">))</span> <span class="p">{</span></span>
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116
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">sort</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">());</span></span>
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117
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="cpp"> <span class="n" style="color: #333;">intervals</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">move</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="118" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
118
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<pre style="margin: 0;">-<span id="LC118" class="line" lang="cpp"> <span class="n" style="color: #333;">assert</span><span class="p">(</span><span class="n" style="color: #333;">is_valid</span><span class="p">().</span><span class="n" style="color: #333;">first</span><span class="p">);</span></span>
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119
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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120
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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121
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<pre style="margin: 0;">-<span id="LC121" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">leftp</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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122
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">rightp</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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123
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<pre style="margin: 0;">-<span id="LC123" class="line" lang="cpp"></span>
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124
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">leftextent</span> <span class="o" style="font-weight: 600;">||</span> <span class="n" style="color: #333;">rightextent</span><span class="p">)</span> <span class="p">{</span></span>
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125
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="cpp"> <span class="n" style="color: #333;">leftp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">leftextent</span><span class="p">;</span></span>
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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
126
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="cpp"> <span class="n" style="color: #333;">rightp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rightextent</span><span class="p">;</span></span>
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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
127
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<pre style="margin: 0;">-<span id="LC127" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="cpp"> <span class="n" style="color: #333;">leftp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">front</span><span class="p">().</span><span class="n" style="color: #333;">start</span><span class="p">;</span></span>
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129
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="cpp"> <span class="n" style="color: #333;">rightp</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">max_element</span><span class="p">(</span><span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span></span>
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<pre style="margin: 0;">-<span id="LC130" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalStopCmp</span><span class="p">())</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">stop</span><span class="p">;</span></span>
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131
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="cpp"> <span class="p">}</span></span>
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132
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="cpp"></span>
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133
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<pre style="margin: 0;">-<span id="LC133" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">lefts</span><span class="p">;</span></span>
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134
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">rights</span><span class="p">;</span></span>
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135
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<pre style="margin: 0;">-<span id="LC135" class="line" lang="cpp"></span>
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136
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">typename</span> <span class="n" style="color: #333;">interval_vector</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">const_iterator</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">();</span> </span>
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<td class="diff-line-num old old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
137
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="cpp"> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">ivals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">();</span> <span class="o" style="font-weight: 600;">++</span><span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span></span>
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138
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span> <span class="o" style="font-weight: 600;">=</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">i</span><span class="p">;</span></span>
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139
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span></span>
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140
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="cpp"> <span class="n" style="color: #333;">lefts</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
141
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span></span>
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142
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="cpp"> <span class="n" style="color: #333;">rights</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span></span>
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143
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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<td class="diff-line-num old old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
144
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<pre style="margin: 0;">-<span id="LC144" class="line" lang="cpp"> <span class="n" style="color: #333;">assert</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">center</span><span class="p">);</span></span>
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145
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="cpp"> <span class="n" style="color: #333;">assert</span><span class="p">(</span><span class="n" style="color: #333;">center</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">stop</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
146
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<pre style="margin: 0;">-<span id="LC146" class="line" lang="cpp"> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span></span>
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147
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="cpp"> <span class="p">}</span></span>
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148
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<pre style="margin: 0;">-<span id="LC148" class="line" lang="cpp"> <span class="p">}</span></span>
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149
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="cpp"></span>
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150
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">lefts</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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151
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="cpp"> <span class="n" style="color: #333;">left</span><span class="p">.</span><span class="n" style="color: #333;">reset</span><span class="p">(</span><span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">move</span><span class="p">(</span><span class="n" style="color: #333;">lefts</span><span class="p">),</span> </span>
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152
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="cpp"> <span class="n" style="color: #333;">depth</span><span class="p">,</span> <span class="n" style="color: #333;">minbucket</span><span class="p">,</span> <span class="n" style="color: #333;">maxbucket</span><span class="p">,</span></span>
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153
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<pre style="margin: 0;">-<span id="LC153" class="line" lang="cpp"> <span class="n" style="color: #333;">leftp</span><span class="p">,</span> <span class="n" style="color: #333;">center</span><span class="p">));</span></span>
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154
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<pre style="margin: 0;">-<span id="LC154" class="line" lang="cpp"> <span class="p">}</span></span>
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155
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">rights</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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156
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<pre style="margin: 0;">-<span id="LC156" class="line" lang="cpp"> <span class="n" style="color: #333;">right</span><span class="p">.</span><span class="n" style="color: #333;">reset</span><span class="p">(</span><span class="k" style="font-weight: 600;">new</span> <span class="n" style="color: #333;">IntervalTree</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">move</span><span class="p">(</span><span class="n" style="color: #333;">rights</span><span class="p">),</span> </span>
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157
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<pre style="margin: 0;">-<span id="LC157" class="line" lang="cpp"> <span class="n" style="color: #333;">depth</span><span class="p">,</span> <span class="n" style="color: #333;">minbucket</span><span class="p">,</span> <span class="n" style="color: #333;">maxbucket</span><span class="p">,</span> </span>
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158
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<pre style="margin: 0;">-<span id="LC158" class="line" lang="cpp"> <span class="n" style="color: #333;">center</span><span class="p">,</span> <span class="n" style="color: #333;">rightp</span><span class="p">));</span></span>
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159
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<pre style="margin: 0;">-<span id="LC159" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC160" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="cpp"> <span class="n" style="color: #333;">assert</span><span class="p">(</span><span class="n" style="color: #333;">is_valid</span><span class="p">().</span><span class="n" style="color: #333;">first</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="cpp"></span>
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164
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<pre style="margin: 0;">-<span id="LC164" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Call f on all intervals near the range [start, stop]:</span></span>
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165
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<pre style="margin: 0;">-<span id="LC165" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">UnaryFunction</span><span class="p">></span></span>
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166
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<pre style="margin: 0;">-<span id="LC166" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">visit_near</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">UnaryFunction</span> <span class="n" style="color: #333;">f</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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167
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<pre style="margin: 0;">-<span id="LC167" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">()</span> <span class="o" style="font-weight: 600;">&&</span> <span class="o" style="font-weight: 600;">!</span> <span class="p">(</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">front</span><span class="p">().</span><span class="n" style="color: #333;">start</span><span class="p">))</span> <span class="p">{</span></span>
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168
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">auto</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">intervals</span><span class="p">)</span> <span class="p">{</span></span>
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169
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="cpp"> <span class="n" style="color: #333;">f</span><span class="p">(</span><span class="n" style="color: #333;">i</span><span class="p">);</span></span>
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170
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC171" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC172" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">left</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="cpp"> <span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">visit_near</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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174
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="cpp"> <span class="p">}</span></span>
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175
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">right</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">>=</span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span></span>
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176
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<pre style="margin: 0;">-<span id="LC176" class="line" lang="cpp"> <span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">visit_near</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC177" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC178" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC179" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC180" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Call f on all intervals crossing pos</span></span>
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<pre style="margin: 0;">-<span id="LC181" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">UnaryFunction</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC182" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">visit_overlapping</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">pos</span><span class="p">,</span> <span class="n" style="color: #333;">UnaryFunction</span> <span class="n" style="color: #333;">f</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_overlapping</span><span class="p">(</span><span class="n" style="color: #333;">pos</span><span class="p">,</span> <span class="n" style="color: #333;">pos</span><span class="p">,</span> <span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC184" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC186" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Call f on all intervals overlapping [start, stop]</span></span>
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187
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">UnaryFunction</span><span class="p">></span></span>
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188
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">visit_overlapping</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">UnaryFunction</span> <span class="n" style="color: #333;">f</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
189
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">filterF</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="o" style="font-weight: 600;">&</span><span class="p">](</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span></span>
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190
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;">>=</span> <span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">stop</span><span class="p">)</span> <span class="p">{</span></span>
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191
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Only apply f if overlapping</span></span>
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="cpp"> <span class="n" style="color: #333;">f</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="cpp"> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_near</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">filterF</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC197" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Call f on all intervals contained within [start, stop]</span></span>
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">UnaryFunction</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">visit_contained</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">UnaryFunction</span> <span class="n" style="color: #333;">f</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">filterF</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="o" style="font-weight: 600;">&</span><span class="p">](</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">start</span> <span class="o" style="font-weight: 600;">&&</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">stop</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">stop</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="cpp"> <span class="n" style="color: #333;">f</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC205" class="line" lang="cpp"> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC206" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_near</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span> <span class="n" style="color: #333;">filterF</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC207" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">findOverlapping</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">stop</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_overlapping</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span></span>
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212
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="cpp"> <span class="p">[</span><span class="o" style="font-weight: 600;">&</span><span class="p">](</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span> </span>
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">emplace_back</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span> </span>
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="cpp"> <span class="p">});</span></span>
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">findContained</span><span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">stop</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC219" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_contained</span><span class="p">(</span><span class="n" style="color: #333;">start</span><span class="p">,</span> <span class="n" style="color: #333;">stop</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="cpp"> <span class="p">[</span><span class="o" style="font-weight: 600;">&</span><span class="p">](</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span> </span>
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">push_back</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span> </span>
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="cpp"> <span class="p">});</span></span>
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<pre style="margin: 0;">-<span id="LC224" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC226" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">empty</span><span class="p">()</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">left</span> <span class="o" style="font-weight: 600;">&&</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC229" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span> </span>
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<pre style="margin: 0;">-<span id="LC231" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC233" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">right</span> <span class="o" style="font-weight: 600;">&&</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="nb" style="color: #0086b3;">true</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC238" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">template</span> <span class="o" style="font-weight: 600;"><</span><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">UnaryFunction</span><span class="p">></span></span>
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="n" style="color: #333;">visit_all</span><span class="p">(</span><span class="n" style="color: #333;">UnaryFunction</span> <span class="n" style="color: #333;">f</span><span class="p">)</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC241" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">left</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC242" class="line" lang="cpp"> <span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">visit_all</span><span class="p">(</span><span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC243" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC244" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">for_each</span><span class="p">(</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">right</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC246" class="line" lang="cpp"> <span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">visit_all</span><span class="p">(</span><span class="n" style="color: #333;">f</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC248" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC249" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">extentBruitForce</span><span class="p">()</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC251" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">struct</span> <span class="nc" style="color: #458; font-weight: 600;">Extent</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC252" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">max</span><span class="p">(),</span></span>
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">min</span><span class="p">()</span> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC254" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="k" style="font-weight: 600;">operator</span><span class="p">()(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC255" class="line" lang="cpp"> <span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">,</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">start</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC256" class="line" lang="cpp"> <span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">second</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">max</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">,</span> <span class="n" style="color: #333;">interval</span><span class="p">.</span><span class="n" style="color: #333;">stop</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC258" class="line" lang="cpp"> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC259" class="line" lang="cpp"> <span class="n" style="color: #333;">Extent</span> <span class="n" style="color: #333;">extent</span><span class="p">;</span></span>
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260
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC261" class="line" lang="cpp"> <span class="n" style="color: #333;">visit_all</span><span class="p">([</span><span class="o" style="font-weight: 600;">&</span><span class="p">](</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">interval</span><span class="p">)</span> <span class="p">{</span> <span class="n" style="color: #333;">extent</span><span class="p">(</span><span class="n" style="color: #333;">interval</span><span class="p">);</span> <span class="p">});</span></span>
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262
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<pre style="margin: 0;">-<span id="LC262" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">extent</span><span class="p">.</span><span class="n" style="color: #333;">x</span><span class="p">;</span></span>
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263
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<pre style="margin: 0;">-<span id="LC263" class="line" lang="cpp"> <span class="p">}</span></span>
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264
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<pre style="margin: 0;">-<span id="LC264" class="line" lang="cpp"></span>
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265
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<pre style="margin: 0;">-<span id="LC265" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// Check all constraints.</span></span>
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266
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<pre style="margin: 0;">-<span id="LC266" class="line" lang="cpp"> <span class="c1" style="color: #998; font-style: italic;">// If first is false, second is invalid.</span></span>
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267
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<pre style="margin: 0;">-<span id="LC267" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="kt" style="color: #458; font-weight: 600;">bool</span><span class="p">,</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>></span> <span class="n" style="color: #333;">is_valid</span><span class="p">()</span> <span class="k" style="font-weight: 600;">const</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC268" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">minmaxStop</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">minmax_element</span><span class="p">(</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> </span>
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269
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<pre style="margin: 0;">-<span id="LC269" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalStopCmp</span><span class="p">());</span></span>
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270
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<pre style="margin: 0;">-<span id="LC270" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">const</span> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">minmaxStart</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">minmax_element</span><span class="p">(</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> </span>
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271
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<pre style="margin: 0;">-<span id="LC271" class="line" lang="cpp"> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">());</span></span>
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272
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<pre style="margin: 0;">-<span id="LC272" class="line" lang="cpp"> </span>
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273
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="kt" style="color: #458; font-weight: 600;">bool</span><span class="p">,</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">pair</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="p">,</span> <span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>></span> <span class="n" style="color: #333;">result</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="nb" style="color: #0086b3;">true</span><span class="p">,</span> <span class="p">{</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">max</span><span class="p">(),</span></span>
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274
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<pre style="margin: 0;">-<span id="LC274" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">Scalar</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">min</span><span class="p">()</span> <span class="p">}};</span></span>
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275
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">empty</span><span class="p">())</span> <span class="p">{</span></span>
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276
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<pre style="margin: 0;">-<span id="LC276" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">,</span> <span class="n" style="color: #333;">minmaxStart</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">start</span><span class="p">);</span></span>
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277
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<pre style="margin: 0;">-<span id="LC277" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">,</span> <span class="n" style="color: #333;">minmaxStop</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">stop</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
278
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<pre style="margin: 0;">-<span id="LC278" class="line" lang="cpp"> <span class="p">}</span></span>
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279
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<pre style="margin: 0;">-<span id="LC279" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">left</span><span class="p">)</span> <span class="p">{</span></span>
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<td class="diff-line-num old old_line" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
280
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<pre style="margin: 0;">-<span id="LC280" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">valid</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">left</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">is_valid</span><span class="p">();</span></span>
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<td class="diff-line-num old old_line" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
281
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<pre style="margin: 0;">-<span id="LC281" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">&=</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">;</span></span>
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<td class="diff-line-num old old_line" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
282
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<pre style="margin: 0;">-<span id="LC282" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">,</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
283
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<pre style="margin: 0;">-<span id="LC283" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">,</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">);</span></span>
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<td class="diff-line-num old old_line" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
284
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<pre style="margin: 0;">-<span id="LC284" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">)</span> <span class="p">{</span> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span> <span class="p">}</span></span>
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285
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<pre style="margin: 0;">-<span id="LC285" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span> <span class="o" style="font-weight: 600;">>=</span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span></span>
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286
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<pre style="margin: 0;">-<span id="LC286" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<td class="diff-line-num old old_line" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
287
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<pre style="margin: 0;">-<span id="LC287" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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288
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<pre style="margin: 0;">-<span id="LC288" class="line" lang="cpp"> <span class="p">}</span></span>
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289
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<pre style="margin: 0;">-<span id="LC289" class="line" lang="cpp"> <span class="p">}</span></span>
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<td class="diff-line-num old old_line" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
290
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<pre style="margin: 0;">-<span id="LC290" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">right</span><span class="p">)</span> <span class="p">{</span></span>
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<td class="diff-line-num old old_line" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
291
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<pre style="margin: 0;">-<span id="LC291" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">valid</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">right</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">is_valid</span><span class="p">();</span></span>
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<td class="diff-line-num old old_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
292
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<pre style="margin: 0;">-<span id="LC292" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">&=</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">;</span></span>
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<td class="diff-line-num old old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
293
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<pre style="margin: 0;">-<span id="LC293" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">,</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">);</span></span>
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294
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">min</span><span class="p">(</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">,</span> <span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span><span class="p">)</span> <span class="p">{</span> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">valid</span><span class="p">.</span><span class="n" style="color: #333;">second</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;"><=</span> <span class="n" style="color: #333;">center</span><span class="p">)</span> <span class="p">{</span> </span>
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC298" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC301" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">is_sorted</span><span class="p">(</span><span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">begin</span><span class="p">(),</span> <span class="n" style="color: #333;">intervals</span><span class="p">.</span><span class="n" style="color: #333;">end</span><span class="p">(),</span> <span class="n" style="color: #333;">IntervalStartCmp</span><span class="p">()))</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="cpp"> <span class="n" style="color: #333;">result</span><span class="p">.</span><span class="n" style="color: #333;">first</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC303" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">result</span><span class="p">;</span> </span>
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<pre style="margin: 0;">-<span id="LC305" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC306" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">friend</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="k" style="font-weight: 600;">operator</span><span class="o" style="font-weight: 600;"><<</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">os</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">itree</span><span class="p">)</span> <span class="p">{</span></span>
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308
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">writeOut</span><span class="p">(</span><span class="n" style="color: #333;">os</span><span class="p">,</span> <span class="n" style="color: #333;">itree</span><span class="p">);</span></span>
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309
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC311" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">friend</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">writeOut</span><span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">ostream</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">os</span><span class="p">,</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">itree</span><span class="p">,</span> </span>
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<td class="diff-line-num old old_line" data-linenumber="312" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC312" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span> <span class="n" style="color: #333;">depth</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span> <span class="p">{</span></span>
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<td class="diff-line-num old old_line" data-linenumber="313" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
313
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="n" style="color: #333;">pad</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="o" style="font-weight: 600;">&</span><span class="p">]()</span> <span class="p">{</span> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="kt" style="color: #458; font-weight: 600;">size_t</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">depth</span><span class="p">;</span> <span class="o" style="font-weight: 600;">++</span><span class="n" style="color: #333;">i</span><span class="p">)</span> <span class="p">{</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="sc" style="color: #d14;">' '</span><span class="p">;</span> <span class="p">}</span> <span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"center: "</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">center</span> <span class="o" style="font-weight: 600;"><<</span> <span class="sc" style="color: #d14;">'\n'</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">for</span> <span class="p">(</span><span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">interval</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">inter</span> <span class="o" style="font-weight: 600;">:</span> <span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">intervals</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">inter</span> <span class="o" style="font-weight: 600;"><<</span> <span class="sc" style="color: #d14;">'\n'</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="cpp"> <span class="p">}</span></span>
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318
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">left</span><span class="p">)</span> <span class="p">{</span></span>
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319
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"left:</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="cpp"> <span class="n" style="color: #333;">writeOut</span><span class="p">(</span><span class="n" style="color: #333;">os</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">left</span><span class="p">,</span> <span class="n" style="color: #333;">depth</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC321" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC322" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"left: nullptr</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC323" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC324" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">right</span><span class="p">)</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC325" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"right:</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC326" class="line" lang="cpp"> <span class="n" style="color: #333;">writeOut</span><span class="p">(</span><span class="n" style="color: #333;">os</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">itree</span><span class="p">.</span><span class="n" style="color: #333;">right</span><span class="p">,</span> <span class="n" style="color: #333;">depth</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC327" class="line" lang="cpp"> <span class="p">}</span> <span class="k" style="font-weight: 600;">else</span> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC328" class="line" lang="cpp"> <span class="n" style="color: #333;">pad</span><span class="p">();</span> <span class="n" style="color: #333;">os</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"right: nullptr</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC329" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC330" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">os</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC331" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC332" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC333" class="line" lang="cpp"><span class="nl">private:</span></span>
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<pre style="margin: 0;">-<span id="LC334" class="line" lang="cpp"> <span class="n" style="color: #333;">interval_vector</span> <span class="n" style="color: #333;">intervals</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC335" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">unique_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">left</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC336" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">unique_ptr</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">IntervalTree</span><span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">right</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC337" class="line" lang="cpp"> <span class="n" style="color: #333;">Scalar</span> <span class="n" style="color: #333;">center</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC338" class="line" lang="cpp"><span class="p">};</span></span>
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<pre style="margin: 0;">-<span id="LC339" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#ifdef USE_INTERVAL_TREE_NAMESPACE</span></span>
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<pre style="margin: 0;">-<span id="LC340" class="line" lang="cpp"><span class="p">}</span></span>
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<pre style="margin: 0;">-<span id="LC341" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#endif</span></span>
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<pre style="margin: 0;">-<span id="LC342" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC343" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#endif</span></span></pre>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#c99edf3687f92ddaeb98b563e4f5489c663bf73c"><strong>debian/patches/crossbuild</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Description: Enable cross-building</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -1,4 +1,9 @@</span></span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#1358302e96d0d2aa4233e79862aeedd6f8dfd25b"><strong>debian/patches/disorder_include</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Subject: Put the disorder.h include where it is used</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: https://github.com/vcflib/vcflib/pull/299</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/src/Variant.h</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/src/Variant.h</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -19,7 +19,6 @@</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"> #include "join.h"</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"> #include "tabix.hpp"</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"> #include <span class="idiff left right">"SmithWatermanGotoh.h"</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> #include <span class="idiff left right"><smithwaterman/SmithWatermanGotoh.h></span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include "disorder.h"</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="diff"> #include <ssw_cpp.h></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="diff"> #include "convert.h"</span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#0ba8c24deb72a65ea9a4a10047438d627bdd1496"><strong>debian/patches/dont_link_pthread</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Description: pthread is needed by the libraries we link to, but not us</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -125,11 +125,11 @@</span></span>
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<li id="ea7bb8863c58f94a4fb117eb619181c1190e9d35">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#ea7bb8863c58f94a4fb117eb619181c1190e9d35"><strong>debian/patches/fix_ssw_cpp_header_name.patch</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 13 Sep 2018 19:35:33 +0200</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: The header file is named ssw_cpp.h</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="diff">--- <span class="idiff left right">a</span>/src/Variant.h</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/Variant.h</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- <span class="idiff left right">libvcflib.orig</span>/src/Variant.h</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ <span class="idiff left right">libvcfli</span>b/src/Variant.h</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="p">@@ -20,7 +20,7 @@</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"> #include "tabix.hpp"</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"> #include <span class="idiff left right">"SmithWatermanGotoh.h"</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> #include <span class="idiff left right"><smithwaterman/SmithWatermanGotoh.h></span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="diff"> #include "disorder.h"</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include "ssw_cpp.hpp"</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <ssw_cpp.h></span></span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#3db93006c999daaa652555ee5b093f17a4858e39"><strong>debian/patches/hardening-flags</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Subject: Pass CPPFLAGS</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -125,7 +125,7 @@</span></span>
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<li id="8390ecfcfabfca8e83a5a8d931f22f0bf446f807">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#8390ecfcfabfca8e83a5a8d931f22f0bf446f807"><strong>debian/patches/intervaltree.patch</strong>
deleted
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 23 Jun 2016 09:10:54 +0200</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="diff"><span class="p">Description: We provide a local copy of intervaltree in debian/include and</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"> inject it here in the build system</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff">--- libvcflib.orig/Makefile</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="p">@@ -171,6 +171,7 @@</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"> multichoose: pre</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"> echo "Source does not contain dir multichoose"</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="diff"> #cd multichoose && $(MAKE) && cp *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ mkdir -p $(VCF_LIB_LOCAL)/$(INC_DIR)/ && cp -a debian/include/* $(VCF_LIB_LOCAL)/$(INC_DIR)/</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="diff"> intervaltree: pre</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="diff"> echo "Source does not contain dir intervaltree"</span></pre>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#379a35dfe7ea627e49b9204c1c9794c5dc088a38"><strong>debian/patches/no_fsom</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Subject: fsom is not used</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -114,9 +114,6 @@</span></span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#09ca7123b01710278d1911e3f5847900e5af3f8d"><strong>debian/patches/no_libVCFH</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">michael.crusoe@gmail.com</span>></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">From: Michael R. Crusoe <<span class="idiff left right">crusoe@debian.org</span>></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Subject: libVCFH is not used</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -200,7 +200,6 @@</span></span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#527fffe3980c2be33244c74ec2cfc7a6a95e92cf"><strong>debian/patches/override_version</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe</span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe<span class="idiff left right"> <crusoe@debian.org></span></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Description: allow us to specify the package version</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="p">@@ -136,7 +136,7 @@</span></span>
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<li id="9282af4050bfc4ccfdc58b03281755547772cffa">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#9282af4050bfc4ccfdc58b03281755547772cffa"><strong>debian/patches/pkg-config.patch</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Fri, 10 Feb 2017 09:09:35 +0100</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: Add pkg-config file to simplify building of freebayes</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- /dev/null</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/libvcflib.pc</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="p">@@ -0,0 +1,12 @@</span></span>
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<li id="5dd3e65e8bf2a49f7e8db4bc4087719b91091f7c">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#5dd3e65e8bf2a49f7e8db4bc4087719b91091f7c"><strong>debian/patches/shared_lib.patch</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 15 Sep 2016 22:26:26 +0200</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: Create shared lib instead of static</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="p">@@ -152,7 +152,7 @@</span></span>
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<li id="f73c14546ec70508e3c3d3efcb88f0ebad9f1f73">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#f73c14546ec70508e3c3d3efcb88f0ebad9f1f73"><strong>debian/patches/use_debian_packaged_fastahack.patch</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 23 Jun 2016 09:10:54 +0200</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: Use Debian packaged libfastahack (and libdisorder)</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="p">@@ -119,7 +119,6 @@</span></span>
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<li id="e847dec435c3030822de2161ab48d6c5b17c318d">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#e847dec435c3030822de2161ab48d6c5b17c318d"><strong>debian/patches/use_debian_packaged_libssw.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,7 @@ Last-Update: Tue, 22 Nov 2016 10:56:09 +0100</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Bug-Debian: https://bugs.debian.org/838513</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="diff"><span class="p">Description: Use Debian packaged libssw (while its not clear</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"> why two implementations of Smith-Waterman are needed at all)</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="diff"><span class="p">@@ -129,9 +129,7 @@</span></span>
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<li id="947e072c91575647e20c8e6e1b441e13fbe6fe5b">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#947e072c91575647e20c8e6e1b441e13fbe6fe5b"><strong>debian/patches/use_debian_packaged_smithwaterman.patch</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 23 Jun 2016 09:10:54 +0200</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: Use Debian packaged libsmithwaterman</span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="p">@@ -120,11 +120,6 @@</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -66,3 +66,14 @@ Description: Use Debian packaged libsmithwaterman</td>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="diff"> $(MAKE) clean -C fastahack</span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="diff"> $(MAKE) clean -C multichoose</span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="diff"> $(MAKE) clean -C libVCFH</span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- libvcflib.orig/src/Variant.h</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/src/Variant.h</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="p">@@ -18,7 +18,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"> #include "split.h"</span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"> #include "join.h"</span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"> #include "tabix.hpp"</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include "SmithWatermanGotoh.h"</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <smithwaterman/SmithWatermanGotoh.h></span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"> #include "disorder.h"</span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"> #include "ssw_cpp.hpp"</span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"> #include "convert.h"</span></pre>
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<li id="2026da8936a56f81ff5288c425be00e819243775">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#2026da8936a56f81ff5288c425be00e819243775"><strong>debian/patches/use_debian_packaged_tabixpp.patch</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Thu, 23 Jun 2016 09:10:54 +0200</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="diff"><span class="p">Description: Use Debian packaged libtabixpp</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff">--- libvcflib.orig/Makefile</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ libvcflib/Makefile</span></span>
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<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/libvcflib/-/compare/b072c53c3c167285e0c15cec0d17164993554420...cbb46c4e6719e4c9706ce9432f6313dd5f610021#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/vcflib/vcflib/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/vcflib/vcflib/issues/new</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> - Name: bio.tools</span>
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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Entry: vcflib</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,3 +9,5 @@ Registry:</td>
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> Entry: SCR_001231</span>
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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> - Name: conda:bioconda</span>
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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> Entry: vcflib</span>
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<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">Repository: https://github.com/vcflib/vcflib.git</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">Repository-Browse: https://github.com/vcflib/vcflib</span></pre>
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