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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-cobra">Debian Med / python-cobra</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cobra/-/commit/980a7771e52053a17a7d71ef14daf057092429b3">980a7771</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-11-05T21:54:25+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not use -all since sbml only builds its python extension for the
default python
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cobra/-/commit/01c7e3bc7ea7e95235523d09629e1312b11cd05c">01c7e3bc</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-11-05T22:09:58+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">xfail test_show_versions which xpass during autopkgtest
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/python-cobra/-/commit/add10fcaac64897c91776e46d044a8fa3fa500f9">add10fca</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-11-05T22:11:41+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt data location with new version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cobra/-/commit/60200c4e6b99b4aa2ef6c670d0581370a3e6d4f8">60200c4e</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2020-11-05T22:11:58+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Rename overrides
</pre>
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<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#31f994a783885b328046d23372337c5f0954b8cc">
<span class="new-file">
+
debian/patches/xfail_test_show_versions.patch
</span>
</a>
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<li class="file-stats">
<a href="#03c95bb9376fa87e4108bac2dcc08ef252e26cf3">
debian/python-cobra-data.install
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<li class="file-stats">
<a href="#31506eb71f9b690f10fb6f4d9e6dee4d6e32625e">
debian/python-cobra-data.lintian-overrides
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/python-cobra/-/compare/6fb4e53a1e36b1af1d16b52ad610c696f79414a3...60200c4e6b99b4aa2ef6c670d0581370a3e6d4f8#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,8 +7,7 @@ Priority: optional</td>
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> dh-python,</span>
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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> libglpk-dev,</span>
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<td class="diff-line-num old old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> python3-all,</span>
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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> python3-all-dev,</span>
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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> python3-dev,</span>
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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> python3-setuptools,</span>
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<td class="diff-line-num old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> python3-depinfo,</span>
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<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> python3-future,</span>
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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<a href="https://salsa.debian.org/med-team/python-cobra/-/compare/6fb4e53a1e36b1af1d16b52ad610c696f79414a3...60200c4e6b99b4aa2ef6c670d0581370a3e6d4f8#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">mathjax.patch</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">no_importlib_resources_for_test.patch</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">xfail_test_show_versions.patch</span></pre>
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<li id="31f994a783885b328046d23372337c5f0954b8cc">
<a href="https://salsa.debian.org/med-team/python-cobra/-/compare/6fb4e53a1e36b1af1d16b52ad610c696f79414a3...60200c4e6b99b4aa2ef6c670d0581370a3e6d4f8#31f994a783885b328046d23372337c5f0954b8cc"><strong>debian/patches/xfail_test_show_versions.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: Mark test_show_versions as xfail.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">The corresponding files aren't installed during build time. This simple xpass during autopkgtest and has been tested for the same.</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Author: Nilesh Patra <npatra974@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Forwarded: not-needed</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">Last-Update: 2020-11-05</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/cobra/test/test_util/test_util.py</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/cobra/test/test_util/test_util.py</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="p">@@ -1,8 +1,9 @@</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> """Test functions of util.py"""</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> from cobra.util import show_versions</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+import pytest</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+@pytest.mark.xfail(reason="The binary doesn't seem to be built during build - this should simply xpass during autopkgtests")</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> def test_show_versions(capsys):</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> show_versions()</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> captured = capsys.readouterr()</span></pre>
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<a href="https://salsa.debian.org/med-team/python-cobra/-/compare/6fb4e53a1e36b1af1d16b52ad610c696f79414a3...60200c4e6b99b4aa2ef6c670d0581370a3e6d4f8#03c95bb9376fa87e4108bac2dcc08ef252e26cf3"><strong>debian/python-cobra-data.install</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="php"><span class="n" style="color: #333;">cobra</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">test</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">usr</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">share</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">python</span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">cobra</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="php"><span class="n" style="color: #333;"><span class="idiff left">src</span></span><span class="o" style="font-weight: 600;"><span class="idiff right">/</span></span><span class="n" style="color: #333;">cobra</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">test</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">data</span> <span class="n" style="color: #333;">usr</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">share</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">python</span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">cobra</span></span></pre>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># These two files are used by the test suite to check handling of the different</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"># compression formats</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">python-cobra-data: <span class="idiff left right">duplicated-compressed-fil</span>e usr/share/python-cobra/data/mini_fbc2.xml.bz2</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">python-cobra-data: <span class="idiff left right">duplicated-compressed-fil</span>e usr/share/python-cobra/data/mini_fbc2.xml.gz</span></pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">python-cobra-data: <span class="idiff left right">compressed-duplicat</span>e usr/share/python-cobra/data/mini_fbc2.xml.bz2</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">python-cobra-data: <span class="idiff left right">compressed-duplicat</span>e usr/share/python-cobra/data/mini_fbc2.xml.gz</span></pre>
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