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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/dcff521dd395d6b840d76689b49c651eb431155f">dcff521d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-05T13:45:46+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/dcff521dd395d6b840d76689b49c651eb431155f#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 05 Nov 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 05 Nov 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">6</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">3</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">6</span> | {practice,covid-19,his,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">5</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">4</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">7</span> | {practice,covid-19,his,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> htsjdk | 37 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> dicomscope | 36 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> gdcm | 36 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> gdcm | 35 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools | 33 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dicomscope | 33 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dcm2niix | 24 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> gdcm | 21 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> biosig | 16 | {imaging,physics} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gnumed-server | 16 | {practice,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> pixelmed | 16 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> gnumed-server | 15 | {practice,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> minc-tools | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> gdcm | 14 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> invesalius | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> nifticlib | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> gdcm | 13 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> invesalius | 13 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> ngs-sdk | 13 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> king | 12 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> vtk-dicom | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> king | 11 | {imaging,typesetting} | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> nifticlib | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> openslide | 11 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> ngs-sdk | 10 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> nifticlib | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> plastimatch | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> adun.app | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> insighttoolkit4 | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> insighttoolkit4 | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> librg-utils-perl | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> obitools | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> dicompyler | 7 | {oncology} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -140,6 +140,7 @@ Last-Update: Thu, 05 Nov 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> qcumber | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> rdp-alignment | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> rdp-classifier | 2 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext"> samtools-legacy | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> sga | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> skesa | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> trace2dbest | 2 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -153,6 +154,7 @@ Last-Update: Thu, 05 Nov 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> cufflinks | 1 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> dextractor | 1 | {covid-19,bio} | </span>
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156
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> embassy-phylip | 1 | {bio,cloud} | </span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="plaintext"> emboss-explorer | 1 | {bio} | </span>
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158
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="plaintext"> libbio-mage-utils-perl | 1 | {bio-dev} | </span>
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159
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="plaintext"> libctapimkt | 1 | {practice} | </span>
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160
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="plaintext"> libmuscle | 1 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -160,14 +162,12 @@ Last-Update: Thu, 05 Nov 2020 01:42:04 +0000</td>
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162
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<pre style="margin: 0;"> <span id="LC162" class="line" lang="plaintext"> lighter | 1 | {covid-19,bio} | </span>
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163
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<pre style="margin: 0;"> <span id="LC163" class="line" lang="plaintext"> metaphlan2 | 1 | {bio} | </span>
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164
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<pre style="margin: 0;"> <span id="LC164" class="line" lang="plaintext"> nanosv | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext"> nutsqlite | 1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC165" class="line" lang="plaintext"> opencfu | 1 | {laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC166" class="line" lang="plaintext"> opensurgsim | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> papyrus | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> plasmidid | 1 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC169" class="line" lang="plaintext"> pplacer | 1 | {bio,bio-phylogeny,covid-19} | </span>
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170
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="plaintext"> sambamba | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC170" class="line" lang="plaintext"> samtools-legacy | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> seqan | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> sift | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> simrisc | 1 | {oncology} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -184,8 +184,6 @@ Last-Update: Thu, 05 Nov 2020 01:42:04 +0000</td>
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184
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184
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"> biosig | 0 | {physics} | </span>
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185
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185
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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186
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC187" class="line" lang="plaintext"> concurrentqueue | 0 | {bio-dev} | </span>
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188
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext"> emboss-explorer | 0 | {bio} | </span>
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<td class="diff-line-num old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
189
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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<td class="diff-line-num old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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191
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> htscodecs | 0 | {bio-dev,covid-19} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="242" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -242,5 +240,5 @@ Last-Update: Thu, 05 Nov 2020 01:42:04 +0000</td>
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240
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<pre style="margin: 0;"> <span id="LC240" class="line" lang="plaintext"> orthanc-python | -1 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC241" class="line" lang="plaintext"> shovill | -1 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC242" class="line" lang="plaintext"> svim | -1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC245" class="line" lang="plaintext">(2<span class="idiff left right">70</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="plaintext">(2<span class="idiff left right">68</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="plaintext"></span></pre>
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