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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/centrifuge">Debian Med / centrifuge</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/centrifuge/-/commit/00ef632a7a0520c0f86740fe197618c3ce53c702">00ef632a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-06T16:53:18+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Enable building on all architectures where jellyfish is available
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/centrifuge/-/commit/dacba48586d0cd69cfab6f924c7f8af37d21a5cd">dacba485</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-06T16:54:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">No need to Build-Depend hisat2 since this is available on all architectures now. Jellyfish is the restricting package for builds.
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/centrifuge/-/commit/4f43fd41331ee32a6369dd54afb222904837ec86">4f43fd41</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-06T16:56:03+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Test on all architectures where jellyfish is available
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/centrifuge/-/commit/fdc29ed002184d6ede7cca41c4b95707bcc294c7">fdc29ed0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-06T16:59:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
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<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#9a7cede9e4d9daba6de815fbe821825332b9311f">
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+
debian/patches/enable_arm64_and_others.patch
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</a>
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<li class="file-stats">
<a href="#83223a554d33ba7e1888274ff8ac43adb8147ba0">
debian/tests/control
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/centrifuge/-/compare/33c67c77e4e6714ec70a30b36326a6bb0f91ecfb...fdc29ed002184d6ede7cca41c4b95707bcc294c7#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">centrifuge (1.0.3-5) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Enable building on all architectures where jellyfish is available</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * No need to Build-Depend hisat2 since this is available on all</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> architectures now. Jellyfish is the restricting package for builds.</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Test on all architectures where jellyfish is available</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 06 Nov 2020 16:56:30 +0100</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">centrifuge (1.0.3-4) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> * Team Upload.</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/centrifuge/-/compare/33c67c77e4e6714ec70a30b36326a6bb0f91ecfb...fdc29ed002184d6ede7cca41c4b95707bcc294c7#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,7 +6,6 @@ Priority: optional</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> dh-python,</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> dh-sequence-python3,</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> hisat2,</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> jellyfish</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Standards-Version: 4.5.0</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/centrifuge</span>
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<li id="9a7cede9e4d9daba6de815fbe821825332b9311f">
<a href="https://salsa.debian.org/med-team/centrifuge/-/compare/33c67c77e4e6714ec70a30b36326a6bb0f91ecfb...fdc29ed002184d6ede7cca41c4b95707bcc294c7#9a7cede9e4d9daba6de815fbe821825332b9311f"><strong>debian/patches/enable_arm64_and_others.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: Enable building on all architectures where jellyfish is available</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">FIXME: That patch is a bit rude since it relies on the fact that</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"> jellyfish builds on 64 bit architectures only. Feel free to enhance</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">Last-Update: Fri, 06 Nov 2020 16:51:21 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">--- a/Makefile</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/Makefile</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="p">@@ -141,7 +141,7 @@</span> GIT_VERSION = $(VERSION)</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> #GIT_VERSION = $(shell command -v git 2>&1 > /dev/null && git describe --long --tags --dirty --always --abbrev=10 || cat VERSION)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> # Convert BITS=?? to a -m flag</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-BITS=32</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+BITS=64</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> ifeq (x86_64,$(shell uname -m))</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> BITS=64</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> endif</span></pre>
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<a href="https://salsa.debian.org/med-team/centrifuge/-/compare/33c67c77e4e6714ec70a30b36326a6bb0f91ecfb...fdc29ed002184d6ede7cca41c4b95707bcc294c7#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -4,3 +4,4 @@ fix_auto_ptr_usage_in_gcc-7.patch</td>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">hardening.patch</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">no_msse2.patch</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">2to3.patch</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">enable_arm64_and_others.patch</span></pre>
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<a href="https://salsa.debian.org/med-team/centrifuge/-/compare/33c67c77e4e6714ec70a30b36326a6bb0f91ecfb...fdc29ed002184d6ede7cca41c4b95707bcc294c7#83223a554d33ba7e1888274ff8ac43adb8147ba0"><strong>debian/tests/control</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Tests: run-unit-test</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Depends: @</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Restrictions: allow-stderr</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"></span></pre>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"># Mention all architectures where jellyfish is available</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">Architecture: amd64 arm64 mips64el ia64 riscv64</span></pre>
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