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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/pbbam">Debian Med / pbbam</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/-/commit/0d6a3da8b519b2539fd4e63a5441c034982c9b58">0d6a3da8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-12T16:36:05+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/-/commit/ed0965a043add3d41b05935ba4e0c413fcc61420">ed0965a0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-12T16:36:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/-/commit/53d9dab9ab9f13fd6fd81457addf6d164c0c9169">53d9dab9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-12T16:36:12+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.6.0+dfsg'
Update to upstream version '1.6.0+dfsg'
with Debian dir 7b7394d3b1232e400a7d3fe22312f81aad9f849d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/-/commit/ffb071978426113baa11aec8db8d1f6453c57814">ffb07197</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-12T16:45:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Referesh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/-/commit/18fb874e4093b044b1f21f9ed7a45f5e479acc5d">18fb874e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-12T16:49:04+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump versioned Build-Depends: libpbcopper-dev (>= 1.8.0)
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#8ab4e94f59343a8b2d003b0b47d21fff1724bfd9">
bamboo_build.sh
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#ff915ae138b6737d7ec8867ad801818d7c99e76a">
<span class="deleted-file">
−
debian/patches/fix_gtest_depcheck.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
</a>
</li>
<li class="file-stats">
<a href="#a3b059c37cd576eb35589510f7da3f6e65a5a1f7">
debian/patches/results_with_latest_samtools.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#2ada9f385c326ab43caa5a43f5d92e05ede306d5">
<span class="deleted-file">
−
docs/source/api/BamRecordBuilder.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#9f0b32a23251be8ca063eefd8b8853bf3c87f45a">
docs/source/api/DataSetBase.rst
</a>
</li>
<li class="file-stats">
<a href="#31760bf64a595bf76a3c69c861571f35a17ae606">
docs/source/api/FileIndices.rst
</a>
</li>
<li class="file-stats">
<a href="#aded7756cdea7c289134466a0d54da4f26d43abb">
docs/source/conf.py
</a>
</li>
<li class="file-stats">
<a href="#498eb05a8a249beb467f2881b023350603fbd58f">
docs/source/getting_started.rst
</a>
</li>
<li class="file-stats">
<a href="#62df078594b947ca6f787a59ae6ddefabce9fcad">
docs/source/index.rst
</a>
</li>
<li class="file-stats">
<a href="#5bea215ea51cb04ae2a1892bd7568b79295225da">
docs/source/tools/pbindexdump.rst
</a>
</li>
<li class="file-stats">
<a href="#5b59629c2a9d064a809cf7aa7dcfbc8d5989e31c">
docs/specs/pbbam_updated_release3_2.rst
</a>
</li>
<li class="file-stats">
<a href="#feedf4d0444f717d7227468a9529c2cf9740b6fd">
include/meson.build
</a>
</li>
<li class="file-stats">
<a href="#0b230145bb13dc51db1e0e68ac2723313ee229a9">
include/pbbam/Accuracy.h
</a>
</li>
<li class="file-stats">
<a href="#97b03698cb36b558ef2b83306185f1493f428d44">
include/pbbam/AlignmentPrinter.h
</a>
</li>
<li class="file-stats">
<a href="#f747de5a3dc8c782bb99b25c9c7e5c8dfac85b5b">
include/pbbam/BaiIndexCache.h
</a>
</li>
<li class="file-stats">
<a href="#9b8e7465fdabd2180a1985fc676ea4cf29c95d7d">
include/pbbam/BaiIndexedBamReader.h
</a>
</li>
<li class="file-stats">
<a href="#e11de4080cabe1fe6fbdeab22b0f064fdbeab822">
include/pbbam/BamFile.h
</a>
</li>
<li class="file-stats">
<a href="#accf87f74fdd46233f3ca7733c793ca67088e74b">
include/pbbam/BamFileMerger.h
</a>
</li>
<li class="file-stats">
<a href="#460961253fa25e9fb04edd9d56917c4a055683d4">
include/pbbam/BamHeader.h
</a>
</li>
<li class="file-stats">
<a href="#3a425e9a92a7ed061a49ea98c687bb30cd748500">
include/pbbam/BamReader.h
</a>
</li>
<li class="file-stats">
<a href="#97939080c14fd57f90725f590b1094f8f0ee9f10">
include/pbbam/BamRecord.h
</a>
</li>
<li class="file-stats">
<a href="#967b12503062b54b346b15d4c2d01c6fdbcfbdef">
<span class="deleted-file">
−
include/pbbam/BamRecordBuilder.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#6f0af9cd5ecfc522cf50a17f98ffea7c95f16624">
include/pbbam/BamRecordImpl.h
</a>
</li>
<li class="file-stats">
<a href="#158e05e89acca4473ffa89f3fc109a051188ae4c">
include/pbbam/BamRecordTag.h
</a>
</li>
<li class="file-stats">
<a href="#b96a662b54ae36b7eea4f8ddbc5f90133ff94dff">
include/pbbam/BamRecordView.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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