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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/libmaus2">Debian Med / libmaus2</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/libmaus2/-/commit/ffb47d16f4b0bd96313f53c962a9860f75119046">ffb47d16</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-11T17:51:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libmaus2/-/commit/9aaebf4882f096b31739f1f1f22ca8bfcef3b155">9aaebf48</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-11T17:51:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.762+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libmaus2/-/commit/1b2058de03db3be555b27d2a8649dd0f1f386da0">1b2058de</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-11T17:51:55+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.0.762+dfsg'
Update to upstream version '2.0.762+dfsg'
with Debian dir 17c6fc2f09acd7eb0463aa85acb1c14d656967b9</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libmaus2/-/commit/7cc30ef9a6532439a9dcece30d33b0156cfa4c99">7cc30ef9</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-12T15:58:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">dlopen-libz.so.1.patch applied upstream
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#d5b4de16d947214ec306bd57bed1bd23a939b5f9">
Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#517e27f081b236a4f51bee37c439449e558a8417">
<span class="deleted-file">
−
debian/patches/dlopen-libz.so.1.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<span class="deleted-file">
−
debian/patches/series
</span>
</a>
</li>
<li class="file-stats">
<a href="#b914e6be5b0cd0830a43f8c5da0e4614b1edb18f">
<span class="deleted-file">
−
libmaus2irods.pc.in
</span>
</a>
</li>
<li class="file-stats">
<a href="#67e794015a01b8816bd16290e5f8538236da8245">
src/Makefile.am
</a>
</li>
<li class="file-stats">
<a href="#cba616b4aafab7206a181f459f04fa028ba20c16">
src/libmaus2/LibMausConfig.hpp.in
</a>
</li>
<li class="file-stats">
<a href="#56ee4f0f99cec5e58d1a68e1b7dbfc1e8637c0dc">
src/libmaus2/aio/FileRemoval.cpp
</a>
</li>
<li class="file-stats">
<a href="#cde119a9fb1735beb78b1e65c81d6d246f126550">
src/libmaus2/aio/InputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#5237753c501098aa2365ea504ae5a8f3a3064d06">
src/libmaus2/aio/InputStreamFactoryContainer.hpp
</a>
</li>
<li class="file-stats">
<a href="#ab55d88656f9c827ee6dd04003eeeaea6486519c">
src/libmaus2/aio/OFStreamOutputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#2bd3d4ed8c8f922fe0f03ecb2a73753b0789891c">
src/libmaus2/aio/OutputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#968840aea65e37b6646383b2a96b8c13b1e29720">
src/libmaus2/aio/OutputStreamFactoryContainer.hpp
</a>
</li>
<li class="file-stats">
<a href="#6676ded718b162f5132f6c234057abb591795bab">
src/libmaus2/aio/PosixFdOutputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#d3197730e42376c8aba04f47ac62df207f3a21fe">
<span class="new-file">
+
src/libmaus2/aio/SecrecyInputStreamFactory.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#05575923b913bef93b7427a5251bb8539b6883c6">
src/libmaus2/irods/IRodsCommProvider.hpp
→
src/libmaus2/aio/SecrecyInputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#dde05472484d3614c53017ce01e5979bc70f2c2a">
<span class="new-file">
+
src/libmaus2/aio/SecrecyOutputStreamFactory.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#af1c1479f0b72bcba2027f93fc16031fbac3ae8e">
src/libmaus2/irods/IRodsFileBase.hpp
→
src/libmaus2/aio/SecrecyOutputStreamFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#b19fd00a169fb8e92a36f318f086e809fedaf765">
src/libmaus2/irods/IRodsInputStream.hpp
→
src/libmaus2/aio/URLObject.hpp
</a>
</li>
<li class="file-stats">
<a href="#18484f4a463645b411d835fb589369bd1c9d7d1f">
src/libmaus2/alignment/SimpleLocalAligner.hpp
</a>
</li>
<li class="file-stats">
<a href="#bd763f31b698f4e8a9c0b5fb6205c8f754241645">
src/libmaus2/autoarray/AutoArray.hpp
</a>
</li>
<li class="file-stats">
<a href="#963455391901ca06ec01c43d622582d1e336ba55">
src/libmaus2/avl/AVLSet.hpp
</a>
</li>
<li class="file-stats">
<a href="#86aa7c853b68c458bd77d63dc7b8e22e9d5d34e6">
src/libmaus2/bambam/BamBlockWriterBaseFactory.hpp
</a>
</li>
<li class="file-stats">
<a href="#4d497ee1e898c1055f8b71e9ec563a29ef92e1e5">
src/libmaus2/bambam/parallel/BlockSortControl.hpp
</a>
</li>
<li class="file-stats">
<a href="#8b8d27df6803237b0ea403d8b18ed96351975ca6">
src/libmaus2/bitio/BitVector.hpp
</a>
</li>
<li class="file-stats">
<a href="#85e12b771d788b19cccf645f975bd6760485c24e">
src/libmaus2/dazzler/align/AlignmentWriter.hpp
</a>
</li>
<li class="file-stats">
<a href="#8207595375d9ee68b4ed1ae87a3f99b0ec5de51f">
src/libmaus2/dazzler/align/LasSort2.hpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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