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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/pbcopper">Debian Med / pbcopper</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/ef15316f835d95dc331d07eadf3da314257feefe">ef15316f</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-12T15:08:57+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add boost_optional.patch
This patch addresses the following Boost issue:
/usr/include/boost/optional/optional.hpp:1591:3: error: static assertion failed: If you want to output boost::optional, include header <boost/optional/optional_io.hpp>
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/11444c1264623048e983b3aae6c5c870b7812f1e">11444c12</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-12T15:14:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update libpbcopper${version}
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/89e3a67075680a4e10ab58ae4897c544c048b469">89e3a670</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-12T15:32:08+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">boost_optional.patch DEP3 header
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/761d4e790acfb0089e65ed81349464064b6e440f">761d4e79</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-11-12T15:32:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update changelog
</pre>
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<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#5a2e006c89a4e191c66961c9a78e0bc34b07c9d4">
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+
debian/patches/boost_optional.patch
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/pbcopper/-/compare/1028f84b3a9d397030327c052255e80e25774a14...761d4e790acfb0089e65ed81349464064b6e440f#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">pbcopper (1.8.0+dfsg-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * New upstream version</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> [ Étienne Mollier ]</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Add boost_optional.patch: fixes build issues with newer boost versions.</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Thu, 12 Nov 2020 09:44:45 +0100</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">pbcopper (1.6.0+dfsg-4) unstable; urgency=medium</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/pbcopper/-/compare/1028f84b3a9d397030327c052255e80e25774a14...761d4e790acfb0089e65ed81349464064b6e440f#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -18,7 +18,7 @@ Vcs-Git: https://salsa.debian.org/med-team/pbcopper.git</td>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Homepage: https://github.com/PacificBiosciences/pbcopper</span>
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<td class="diff-line-num old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">Package: libpbcopper1.<span class="idiff left right">6</span>.0</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext">Package: libpbcopper1.<span class="idiff left right">8</span>.0</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Architecture: any-amd64 arm64 mips64el ppc64el s390x ia64 ppc64 riscv64 sparc64 alpha</span>
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<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">Multi-Arch: same</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Section: libs</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,7 +37,7 @@ Package: libpbcopper-dev</td>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext">Architecture: any-amd64 arm64 mips64el ppc64el s390x ia64 ppc64 riscv64 sparc64 alpha</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext">Multi-Arch: same</span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext">Section: libdevel</span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext">Depends: libpbcopper1.<span class="idiff left right">6</span>.0 (= ${binary:Version}),</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext">Depends: libpbcopper1.<span class="idiff left right">8</span>.0 (= ${binary:Version}),</span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> ${misc:Depends},</span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> ${shlibs:Depends}</span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext">Description: data structures, algorithms, and utilities for C++ applications -- header files</span>
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<li id="5a2e006c89a4e191c66961c9a78e0bc34b07c9d4">
<a href="https://salsa.debian.org/med-team/pbcopper/-/compare/1028f84b3a9d397030327c052255e80e25774a14...761d4e790acfb0089e65ed81349464064b6e440f#5a2e006c89a4e191c66961c9a78e0bc34b07c9d4"><strong>debian/patches/boost_optional.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: output boost::optional</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"> Since Boost 1.57, it is necessary to include <boost/optional/optional_io.hpp></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"> prior to <boost/optional.hpp>, otherwise there is a static check failing at</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"> macro inclusion time.</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">Author: Étienne Mollier <etienne.mollier@mailoo.org></span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">Forwarded: no</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="p">Last-Update: 2020-11-12</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="p">---</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="p">This patch header follows DEP-3: http://dep.debian.net/deps/dep3/</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- pbcopper.orig/include/pbcopper/data/Read.h</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ pbcopper/include/pbcopper/data/Read.h</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="p">@@ -11,6 +11,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> #include <tuple></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> #include <vector></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <boost/optional/optional_io.hpp></span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> #include <boost/optional.hpp></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> #include <pbcopper/data/Accuracy.h></span></pre>
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<a href="https://salsa.debian.org/med-team/pbcopper/-/compare/1028f84b3a9d397030327c052255e80e25774a14...761d4e790acfb0089e65ed81349464064b6e440f#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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1
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">simde.patch</span>
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2
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">#simde-ppc64el.patch</span>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">static+shared_lib.patch</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">boost_optional.patch</span></pre>
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